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• Label() : MultiplexDeltaMassesGenerator::Label
• labelAsDIAData() : LayerData
• labelAsIonMobilityData() : LayerData
• LabeledPairFinder() : LabeledPairFinder
• LabelFreeLabeler() : LabelFreeLabeler
• labelPeptide_() : ITRAQLabeler
• labelSetToString() : MultiplexDeltaMasses
• largePeaksBeforeFirstIsotope_() : DIAScoring
• lastconsensus() : SpectrumCheapDPCorr
• layerActivated() : PlotCanvas , TOPPViewBase
• LayerAnnotatorAMS() : LayerAnnotatorAMS
• LayerAnnotatorBase() : LayerAnnotatorBase
• LayerAnnotatorOSW() : LayerAnnotatorOSW
• LayerAnnotatorPeptideID() : LayerAnnotatorPeptideID
• LayerData() : LayerData
• layerDataChanged() : LayerListView
• layerDeactivated() : TOPPViewBase
• layerFilterVisibilityChange() : TOPPViewBase
• LayerListView() : LayerListView
• layerModficationChange() : PlotCanvas
• layerStatistics() : TOPPViewBase
• LayerStatisticsDialog() : LayerStatisticsDialog
• layerZoomChanged() : PlotCanvas , TOPPViewBase
• leaveEvent() : PlotCanvas , TOPPASTreeView , TOPPASWidget
• leftBorderOfBin() : Histogram< ValueType, BinSizeType >
• LevMarqFitter1D() : LevMarqFitter1D
• lexicographicComparator() : LexicographicComparator< Cmp1, Cmp2 >
• LexicographicComparator() : LexicographicComparator< Cmp1, Cmp2 >
• LibSVMEncoder() : LibSVMEncoder
• libSVMVectorsToString() : LibSVMEncoder
• libSVMVectorToString() : LibSVMEncoder
• lightClone() : SpectrumAccessOpenMS , SpectrumAccessOpenMSCached , SpectrumAccessOpenMSInMemory , SpectrumAccessQuadMZTransforming , SpectrumAccessSqMass , SpectrumAccessTransforming , ISpectrumAccess
• LightCompound() : LightCompound
• LightTargetedExperiment() : LightTargetedExperiment
• LightTransition() : LightTransition
• line_() : GlobalExceptionHandler
• LinearInterpolation() : LinearInterpolation< Key, Value >
• linearInterpolationAtY_() : MassTrace
• LinearRegression() : LinearRegression
• LinearRegressionWithoutIntercept() : LinearRegressionWithoutIntercept
• LinearResampler() : LinearResampler
• LinearResamplerAlign() : LinearResamplerAlign
• linkZoom() : TOPPViewBase
• ListEditor() : ListEditor
• ListEditorDelegate() : ListEditorDelegate
• ListFilterDialog() : ListFilterDialog
• ListTable() : ListTable
• load() : AbsoluteQuantitationMethodFile , AbsoluteQuantitationStandardsFile , BaseVisualizer< ObjectType > , CachedmzML , ChromeleonFile , ConsensusXMLFile , CsvFile , CVMappingFile , DTA2DFile , DTAFile , EDTAFile , ExperimentalDesignFile , FASTAFile , FeatureXMLFile , GradientVisualizer , IdXMLFile , IMSAlphabet , IMSAlphabetParser< AlphabetElementType, Container, InputSource > , IndexedMzMLFileLoader , InspectOutfile , KroenikFile , MascotGenericFile , MascotInfile , MascotXMLFile , MetaInfoVisualizer , MRMFeaturePickerFile , MRMFeatureQCFile , MS2File , MsInspectFile , MSPFile , MSPGenericFile , MzDataFile , MzIdentMLFile , MzMLFile , MzQuantMLFile , MzTabFile , MzXMLFile , OMSSACSVFile , OMSSAXMLFile , ParamEditor , ParamXMLFile , PepNovoOutfile , PeptideIdentificationVisualizer , PepXMLFile , PepXMLFileMascot , PercolatorOutfile , ProteinIdentificationVisualizer , ProtXMLFile , PTMXMLFile , QcMLFile , SequestOutfile , SpecArrayFile , SqMassFile , SVMData , SvmTheoreticalSpectrumGenerator , SvmTheoreticalSpectrumGeneratorSet , TextFile , ToolDescriptionFile , TOPPASResources , TOPPASScene , TraMLFile , TransformationXMLFile , UnimodXMLFile , XMassFile , XQuestResultXMLFile , XTandemXMLFile
• load_() : CachedmzML
• loadBuffer() : MzMLFile
• loadContaminants() : RawMSSignalSimulation
• loadData_() : GradientVisualizer , MetaInfoVisualizer
• loadExperiment() : FileHandler
• loadExternalToolConfig_() : ToolHandler
• loadFeatures() : FileHandler
• loadFiles() : TOPPASBase , TOPPViewBase
• loadFromOBO() : ControlledVocabulary
• loadINI_() : ToolsDialog , TOPPASToolConfigDialog
• loadInternalToolConfig_() : ToolHandler
• loadIsotopeModel_() : FeatureFindingMetabo
• loadLibSVMProblem() : LibSVMEncoder
• loadMetaData_() : OnDiscMSExperiment
• loadModel() : SVMWrapper
• loadMzML() : SwathFile
• loadMzXML() : SwathFile
• loadParams() : TVToolDiscovery
• loadPipelineResourceFile() : TOPPASBase
• loadPreferences() : TOPPASBase , TOPPViewBase
• loadPreprocessedDB_() : PrecursorIonSelectionPreprocessing
• loadPreprocessing() : PrecursorIonSelectionPreprocessing
• loadResources() : TOPPASScene
• loadSamples_() : FIAMSScheduler
• loadSize() : FeatureXMLFile , MzMLFile
• loadSplit() : SwathFile
• loadSqMass() : SwathFile
• loadSwathFiles() : TOPPOpenSwathBase
• loadSwathFiles_() : TOPPOpenSwathBase
• loadTransitionList() : TOPPOpenSwathBase
• LocalLinearMap() : LocalLinearMap
• locateTerm() : SemanticValidator
• lock() : GUILock
• LockMass() : InternalCalibration::LockMass
• log_eval_no_normalize() : GaussFitter::GaussFitResult , GumbelDistributionFitter::GumbelDistributionFitResult , GumbelMaxLikelihoodFitter::GumbelDistributionFitResult
• LogConfigHandler() : LogConfigHandler
• logfactorial_() : HyperScore
• logFeatureSpectraNumber() : SiriusAdapterAlgorithm
• logHeader_() : MascotRemoteQuery
• login() : MascotRemoteQuery
• logNotify() : LogStreamNotifier
• logOccupancyProb() : XQuestScores
• logOutputFileWritten() : TOPPASScene
• LogStream() : LogStream
• LogStreamBuf() : LogStreamBuf
• LogStreamNotifier() : LogStreamNotifier
• logToolCrashed() : TOPPASScene
• logToolFailed() : TOPPASScene
• logToolFinished() : TOPPASScene
• logToolStarted() : TOPPASScene
• logTOPPOutput() : TOPPASScene
• logTypeToFactoryName_() : ProgressLogger
• LogWindow() : LogWindow
• lookupAddFromHeader_() : PepXMLFile
• lookupModInPreferredMods_() : PepXMLFile::AminoAcidModification
• lorentz_() : PeakPickerCWT
• Loss_function() : EmgGradientDescent , EmgGradientDescent_friend
• lostFocus() : OpenMSLineEdit
• LowessSmoothing() : LowessSmoothing
• LPWrapper() : LPWrapper