DecoyHelper::DecoyStatistics Struct Reference

struct for intermediate results needed for calculations on decoy proteins More...

#include <OpenMS/DATASTRUCTURES/FASTAContainer.h>

Collaboration diagram for DecoyHelper::DecoyStatistics:

Public Member Functions
bool	operator== (const DecoyStatistics &rhs) const

Public Attributes
std::unordered_map< std::string, std::pair< Size, Size > >	decoy_count
	map decoys to counts of occurrences as prefix/suffix More...
std::unordered_map< std::string, std::string >	decoy_case_sensitive
	map case insensitive strings back to original case (as used in fasta) More...
Size	all_prefix_occur {0}
	number of proteins with found decoy_prefix More...
Size	all_suffix_occur {0}
	number of proteins with found decoy_suffix More...
Size	all_proteins_count {0}
	number of all checked proteins More...

Detailed Description

struct for intermediate results needed for calculations on decoy proteins

Member Function Documentation

operator==()

bool operator== ( const DecoyStatistics &  rhs ) const

inline

References DecoyHelper::DecoyStatistics::all_prefix_occur, DecoyHelper::DecoyStatistics::all_proteins_count, DecoyHelper::DecoyStatistics::all_suffix_occur, DecoyHelper::DecoyStatistics::decoy_case_sensitive, and DecoyHelper::DecoyStatistics::decoy_count.

Member Data Documentation

all_prefix_occur

Size all_prefix_occur {0}

number of proteins with found decoy_prefix

Referenced by DecoyHelper::countDecoys(), DecoyHelper::findDecoyString(), and DecoyHelper::DecoyStatistics::operator==().

all_proteins_count

Size all_proteins_count {0}

number of all checked proteins

Referenced by DecoyHelper::countDecoys(), DecoyHelper::findDecoyString(), and DecoyHelper::DecoyStatistics::operator==().

all_suffix_occur

Size all_suffix_occur {0}

number of proteins with found decoy_suffix

Referenced by DecoyHelper::countDecoys(), DecoyHelper::findDecoyString(), and DecoyHelper::DecoyStatistics::operator==().

decoy_case_sensitive

std::unordered_map<std::string, std::string> decoy_case_sensitive

map case insensitive strings back to original case (as used in fasta)

Referenced by DecoyHelper::countDecoys(), DecoyHelper::findDecoyString(), and DecoyHelper::DecoyStatistics::operator==().

decoy_count

std::unordered_map<std::string, std::pair<Size, Size> > decoy_count

map decoys to counts of occurrences as prefix/suffix

Referenced by DecoyHelper::countDecoys(), DecoyHelper::findDecoyString(), and DecoyHelper::DecoyStatistics::operator==().