addAminoAcid(const String &type, const Angle &phi=Angle(-47., false), const Angle &psi=Angle(-58., false), const Angle &omega=Angle(180., false)) | BALL::Peptides::PeptideBuilder | |
addAminoAcid(const AminoAcidDescriptor &aad) | BALL::Peptides::PeptideBuilder | |
ala_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
all_amino_acids_ | BALL::VIEW::PeptideDialog | protectedstatic |
angle_changed() | BALL::VIEW::PeptideDialog | slot |
arg_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
asn_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
asp_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
back_pressed() | BALL::VIEW::PeptideDialog | slot |
chainname_ | BALL::Peptides::PeptideBuilder | protected |
close_pressed() | BALL::VIEW::PeptideDialog | slot |
construct() | BALL::Peptides::PeptideBuilder | |
createResidue_(const String &type, const int id) | BALL::Peptides::PeptideBuilder | protected |
cys_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
eventFilter(QObject *object, QEvent *event) | BALL::VIEW::PeptideDialog | virtualslot |
fragment_db_ | BALL::Peptides::PeptideBuilder | protected |
getAtomByName_(Residue &res, const String &name) | BALL::Peptides::PeptideBuilder | protected |
getChainName() const | BALL::Peptides::PeptideBuilder | |
getFragmentDB() const | BALL::Peptides::PeptideBuilder | |
getProtein() | BALL::VIEW::PeptideDialog | inline |
getProteinName() const | BALL::Peptides::PeptideBuilder | |
getSequence() | BALL::VIEW::PeptideDialog | |
gln_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
glu_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
gly_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
his_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
ile_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
insert_(char a) | BALL::VIEW::PeptideDialog | protected |
BALL::Peptides::PeptideBuilder::insert_(Residue &resnew, Residue &resold) | BALL::Peptides::PeptideBuilder | protected |
insert_seq() | BALL::VIEW::PeptideDialog | slot |
is_proline_ | BALL::Peptides::PeptideBuilder | protected |
isAminoAcid_(char a) const | BALL::VIEW::PeptideDialog | protected |
leu_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
lys_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
met_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
peptide_(Residue &resold, Residue &resnew) | BALL::Peptides::PeptideBuilder | protected |
PeptideBuilder() | BALL::Peptides::PeptideBuilder | |
PeptideBuilder(const std::vector< AminoAcidDescriptor > &sequence) | BALL::Peptides::PeptideBuilder | |
PeptideBuilder(const String &sequence, const Angle &phi=Angle(-47., false), const Angle &psi=Angle(-58., false), const Angle &omega=Angle(180., false)) | BALL::Peptides::PeptideBuilder | |
PeptideBuilder(const PeptideBuilder &pc) | BALL::Peptides::PeptideBuilder | |
PeptideDialog(QWidget *parent=0, const char *name="PeptideDialog", Qt::WFlags fl=0) | BALL::VIEW::PeptideDialog | |
phe_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
pro_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
prolineActivated() | BALL::VIEW::PeptideDialog | slot |
prolineDeactivated() | BALL::VIEW::PeptideDialog | slot |
protein_ | BALL::VIEW::PeptideDialog | protected |
proteinname_ | BALL::Peptides::PeptideBuilder | protected |
sequence_ | BALL::Peptides::PeptideBuilder | protected |
ser_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
setChainName(const String &name) | BALL::Peptides::PeptideBuilder | |
setFragmentDB(const FragmentDB *db) | BALL::Peptides::PeptideBuilder | |
setOmega_(Residue &resold, Residue &residue, const Angle &omega) | BALL::Peptides::PeptideBuilder | protected |
setProteinName(const String &name) | BALL::Peptides::PeptideBuilder | |
thr_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
transform_(const Angle &phi, const Angle &psi, Residue &resold, Residue &resnew) | BALL::Peptides::PeptideBuilder | protected |
trp_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
truncString_(String &data) | BALL::VIEW::PeptideDialog | protected |
tyr_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
val_pressed() | BALL::VIEW::PeptideDialog | inlineslot |
~PeptideBuilder() | BALL::Peptides::PeptideBuilder | virtual |
~PeptideDialog() | BALL::VIEW::PeptideDialog | inline |