| addHydrogen_(Atom &atom, Vector3 position)
(defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| AddHydrogenProcessor() (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
|
| AddHydrogenProcessor(const AddHydrogenProcessor
&hbp) (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
|
| argument_pointer typedef (defined in BALL::UnaryFunctor<
Composite, Processor::Result >) |
BALL::UnaryFunctor<
Composite, Processor::Result > |
|
| argument_reference typedef (defined in BALL::UnaryFunctor<
Composite, Processor::Result >) |
BALL::UnaryFunctor<
Composite, Processor::Result > |
|
| argument_type typedef (defined in BALL::UnaryFunctor<
Composite, Processor::Result >) |
BALL::UnaryFunctor<
Composite, Processor::Result > |
|
| atom_nr_ (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| const_argument_pointer typedef (defined in
BALL::UnaryFunctor<
Composite, Processor::Result >) |
BALL::UnaryFunctor<
Composite, Processor::Result > |
|
| const_argument_reference typedef (defined in
BALL::UnaryFunctor<
Composite, Processor::Result >) |
BALL::UnaryFunctor<
Composite, Processor::Result > |
|
| countBondOrders(Atom &atom) (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
|
finish() |
BALL::UnaryProcessor<
Composite > |
[virtual] |
| getBondLength_(Position element) (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| getConnectivity(Atom &atom) (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
|
| getNormal_(const Vector3 &v) (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| getNumberOfAddedHydrogens() (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
|
| getPartners_(Atom &atom) (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| hasMultipleBond_(Atom &atom) (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| isRingAtom_(Atom &atom) (defined in
BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| last_atom_ (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| normalize_(Vector3 &v) (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| nr_hydrogens_ (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
|
operator()(Composite &composite) |
BALL::AddHydrogenProcessor |
[virtual] |
| result_type typedef (defined in BALL::UnaryFunctor<
Composite, Processor::Result >) |
BALL::UnaryFunctor<
Composite, Processor::Result > |
|
| ring_atoms_ (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[protected] |
| setRings(const vector< vector< Atom * >
> &rings) (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
|
|
start() |
BALL::AddHydrogenProcessor |
[virtual] |
|
UnaryProcessor() |
BALL::UnaryProcessor<
Composite > |
|
|
UnaryProcessor(const UnaryProcessor &) |
BALL::UnaryProcessor<
Composite > |
|
| ~AddHydrogenProcessor() (defined in BALL::AddHydrogenProcessor) |
BALL::AddHydrogenProcessor |
[virtual] |
|
~UnaryProcessor() |
BALL::UnaryProcessor<
Composite > |
[virtual] |
