Class Hierarchy

Go to the graphical class hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

• BALL::Addition< First, Second, DataType >
• BALL::PDB::AdditionalAtomInfo
• BALL::AmberFF::AmberFF::Default
• BALL::AmberFF::AmberFF::Option
• BALL::Peptides::AminoAcidDescriptor
• BALL::AromaticityProcessor::AromaticityProcessor::Default
• BALL::AromaticityProcessor::AromaticityProcessor::Option
• BALL::AssignBondOrderProcessor::AssignBondOrderProcessor::Default
• BALL::AssignBondOrderProcessor::AssignBondOrderProcessor::Option
• BALL::AtomBijection
• BALL::VIEW::AtomOverview
• BALL::AtomTyper
• BALL::AtomVector
• BALL::AutoDeletable
  • BALL::Object
    • BALL::PersistentObject
      • BALL::Composite
        • BALL::Atom
          • BALL::PDBAtom
        • BALL::AtomContainer
          • BALL::Chain
          • BALL::Fragment
            • BALL::Nucleotide
            • BALL::Residue
          • BALL::Molecule
            • BALL::NucleicAcid
            • BALL::Protein
          • BALL::SecondaryStructure
          • BALL::System
        • BALL::Bond
      • BALL::NamedProperty
      • BALL::TVector2< T >
      • BALL::TVector2< float >
    • BALL::VIEW::Renderer
      • BALL::VIEW::BufferedRenderer
      • BALL::VIEW::GLRenderer
      • BALL::VIEW::POVRenderer
      • BALL::VIEW::STLRenderer
      • BALL::VIEW::TilingRenderer
      • BALL::VIEW::VRMLRenderer
    • BALL::VIEW::RepresentationManager
  • BALL::ResourceEntry
• BALL::VIEW::BALLThread
  • BALL::VIEW::DockingThread
  • BALL::VIEW::FetchHTMLThread
  • BALL::VIEW::ServerWidget::ServerWidget::BALLViewServer
  • BALL::VIEW::SimulationThread
    • BALL::VIEW::EnergyMinimizerThread
    • BALL::VIEW::MDSimulationThread
• BALL::BaseIterator< Container, DataType, Position, Traits >
• BALL::BaseIterator< Container, DataType, Position, Traits >
  • BALL::ConstForwardIterator< Container, DataType, Position, Traits >
  • BALL::ConstForwardIterator< Container, DataType, Position, Traits >
    • BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
    • BALL::ForwardIterator< Container, DataType, Position, Traits >
    • BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
      • BALL::BidirectionalIterator< Container, DataType, Position, Traits >
• BALL::BinaryFileAdaptor< T >
• BALL::BinaryFunctor< FirstArgumentType, SecondArgumentType, ResultType >
• BALL::BinaryFunctor< T1, T2, Processor::Result >
  • BALL::BinaryProcessor< T1, T2 >
• BALL::BinaryPredicate< T1, T2 >
• BALL::BindingPocketProcessor::BindingPocketProcessor::Default
• BALL::BindingPocketProcessor::BindingPocketProcessor::Option
• BALL::Bit
• BALL::BitVector
• BALL::VIEW::BondProperties
• BALL::PDB::BookKeeping
• BALL::BuildBondsProcessor::BuildBondsProcessor::Default
• BALL::BuildBondsProcessor::BuildBondsProcessor::Option
• BALL::BuriedPolar
• BALL::BuriedPolar::BuriedPolar::Default
• BALL::BuriedPolar::BuriedPolar::Option
• BALL::VIEW::ButtonEvent
• BALL::VIEW::Camera
• BALL::CanonicalMD::CanonicalMD::AuxFactors
• BALL::ChainBuilder
• BALL::CharmmEEF1::CharmmEEF1::Data
• BALL::CharmmEEF1::CharmmEEF1::Values
• BALL::CharmmFF::CharmmFF::Default
• BALL::CharmmFF::CharmmFF::Option
• BALL::CHPI
• BALL::CHPI::CHPI::AromaticRing
• BALL::CHPI::CHPI::CHGroup
• BALL::Client
• BALL::VIEW::ClippingDialog
• BALL::VIEW::ClippingPlane
• BALL::VIEW::ColorExtension2
  • BALL::VIEW::TwoColoredLine
  • BALL::VIEW::TwoColoredTube
• BALL::VIEW::ColorHSV
• BALL::VIEW::ColorMap
• BALL::VIEW::ColorRGBA
• BALL::VIEW::ColorUnit
• BALL::VIEW::ColorUnitHue
• BALL::Comparator< T >
• BALL::CompositeIteratorTraits
  • BALL::AtomContainerIteratorTraits
  • BALL::AtomIteratorTraits
  • BALL::ChainIteratorTraits
  • BALL::FragmentIteratorTraits
  • BALL::MoleculeIteratorTraits
  • BALL::NucleicAcidIteratorTraits
  • BALL::NucleotideIteratorTraits
  • BALL::PDBAtomIteratorTraits
  • BALL::ProteinIteratorTraits
  • BALL::ResidueIteratorTraits
  • BALL::SecondaryStructureIteratorTraits
• BALL::VIEW::CompositeManager
• BALL::VIEW::CompositeProperties
• BALL::ConformationSet
• BALL::ConjugateGradientMinimizer::ConjugateGradientMinimizer::Default
• BALL::ConjugateGradientMinimizer::ConjugateGradientMinimizer::Option
• BALL::VIEW::ConnectionObject
  • BALL::VIEW::MainControl
  • BALL::VIEW::ModularWidget
    • BALL::VIEW::AssignBondOrderConfigurationDialog
    • BALL::VIEW::AssignBondOrderResultsDialog
    • BALL::VIEW::DisplayProperties
    • BALL::VIEW::DockingController
    • BALL::VIEW::DockWidget
      • BALL::VIEW::EditFunctions
      • BALL::VIEW::FileObserver
      • BALL::VIEW::GenericControl
        • BALL::VIEW::DatasetControl
        • BALL::VIEW::GeometricControl
        • BALL::VIEW::MolecularControl
      • BALL::VIEW::HelpViewer
      • BALL::VIEW::LogView
      • BALL::VIEW::PyWidget
    • BALL::VIEW::DownloadPDBFile
    • BALL::VIEW::EditOperationDialog
    • BALL::VIEW::FDPBDialog
    • BALL::VIEW::LabelDialog
    • BALL::VIEW::ModifyRepresentationDialog
    • BALL::VIEW::MolecularFileDialog
    • BALL::VIEW::MolecularStructure
    • BALL::VIEW::OpenBruker1DFile
    • BALL::VIEW::OpenBruker2DFile
    • BALL::VIEW::PluginDialog
    • BALL::VIEW::PubChemDialog
    • BALL::VIEW::RaytraceableContourSurfaceDialog
    • BALL::VIEW::RegularData1DWidget
    • BALL::VIEW::RegularData2DWidget
    • BALL::VIEW::Scene
      • BALL::VIEW::EditableScene
    • BALL::VIEW::ServerWidget
    • BALL::VIEW::ShortcutDialog
    • BALL::VIEW::SnapshotVisualisationDialog
    • BALL::VIEW::StereoSettingsDialog
    • BALL::VIEW::TestFramework
• BALL::Constant
• BALL::ConstantFunction< constant_template >
• BALL::VIEW::ContourSurfaceDialog
• BALL::CubicFunction< Function, DataType >
• BALL::VIEW::Dataset
• BALL::Directory
• BALL::Division< First, Second, DataType >
• BALL::DockingAlgorithm
  • BALL::GeometricFit
• BALL::VIEW::DockProgressDialog
• BALL::DockResult
• BALL::DockResult::DockResult::Compare_
• BALL::DockResult::DockResult::Scoring_
• BALL::VIEW::DockResultDialog
• BALL::VIEW::DockResultDialog::DockResultDialog::Compare_
• BALL::VIEW::EditSingleShortcut
• BALL::ElectrostaticPotentialCalculator
• BALL::ElectrostaticPotentialCalculator::ElectrostaticPotentialCalculator::Default
• BALL::ElectrostaticPotentialCalculator::ElectrostaticPotentialCalculator::Option
• BALL::Element
• BALL::Embeddable
  • BALL::VIEW::DatasetController
    • BALL::VIEW::DockResultController
    • BALL::VIEW::RaytraceableGridController
    • BALL::VIEW::RegularData3DController
    • BALL::VIEW::TrajectoryController
    • BALL::VIEW::VectorGridController
  • BALL::VIEW::MainControl
  • BALL::VIEW::ModularWidget
  • BALL::VIEW::ShortcutRegistry
• BALL::EnergeticEvaluation
  • BALL::ForceFieldEvaluation
    • BALL::AmberEvaluation
  • BALL::RandomEvaluation
• BALL::EnergyMinimizer
  • BALL::ConjugateGradientMinimizer
  • BALL::ShiftedLVMMMinimizer
  • BALL::SteepestDescentMinimizer
  • BALL::StrangLBFGSMinimizer
• BALL::EnergyMinimizer::EnergyMinimizer::Option
• BALL::Enumerator< Container, SiteIterator, Variant >
• BALL::EnumeratorIndex
• BALL::Expression
• BALL::ExpressionParser
• BALL::ExpressionParser::ExpressionParser::SyntaxTree
• BALL::ExpressionTree
• BALL::Factory< T >
• BALL::FDPB
• BALL::FDPB::FDPB::Boundary
• BALL::FDPB::FDPB::ChargeDistribution
• BALL::FDPB::FDPB::Default
• BALL::FDPB::FDPB::DielectricSmoothing
• BALL::FDPB::FDPB::FastAtomStruct
• BALL::FDPB::FDPB::Option
• BALL::VIEW::FieldLineCreator
  • BALL::VIEW::FieldLinesDialog
• BALL::File
  • BALL::Bruker1DFile
  • BALL::Bruker2DFile
  • BALL::DSN6File
  • BALL::LineBasedFile
    • BALL::GenericMolFile
      • BALL::GAMESSDatFile
      • BALL::GAMESSLogFile
      • BALL::HINFile
      • BALL::KCFFile
      • BALL::MOL2File
      • BALL::MOLFile
        • BALL::SDFile
      • BALL::PDBFile
      • BALL::XYZFile
    • BALL::JCAMPFile
    • BALL::NMRStarFile
    • BALL::SCWRLRotamerFile
  • BALL::ResourceFile
  • BALL::TrajectoryFile
    • BALL::DCDFile
    • BALL::TRRFile
• BALL::FileSystem
• BALL::ForceField
  • BALL::AmberFF
  • BALL::CharmmFF
  • BALL::MMFF94
• BALL::ForceFieldComponent
  • BALL::AmberBend
  • BALL::AmberNonBonded
  • BALL::AmberStretch
  • BALL::AmberTorsion
  • BALL::CharmmBend
  • BALL::CharmmImproperTorsion
  • BALL::CharmmNonBonded
  • BALL::CharmmStretch
  • BALL::CharmmTorsion
  • BALL::ChemScoreMetal
  • BALL::MMFF94NonBonded
  • BALL::MMFF94OutOfPlaneBend
  • BALL::MMFF94StretchBend
  • BALL::MMFF94Torsion
• BALL::FragmentDB
• BALL::VIEW::FrameBufferFormat
• BALL::GAFFTypeProcessor::GAFFTypeProcessor::TypeDefinition
• BALL::GAMESSDatFile::GAMESSDatFile::block
• BALL::GAMESSDatFile::GAMESSDatFile::State
• BALL::GAMESSLogFile::GAMESSLogFile::State
• BALL::Exception::GeneralException
  • BALL::Bit::Bit::IllegalOperation
  • BALL::Bond::Bond::NotBound
  • BALL::Client::Client::InvalidClient
  • BALL::Client::Client::NoPersistentObject
  • BALL::EnumeratorIndex::EnumeratorIndex::IncompatibleIndex
  • BALL::Exception::BufferOverflow
  • BALL::Exception::CUDAError
  • BALL::Exception::DivisionByZero
  • BALL::Exception::FileNotFound
  • BALL::Exception::FormatUnsupported
  • BALL::Exception::IllegalPosition
  • BALL::Exception::IllegalSelfOperation
  • BALL::Exception::IllegalTreeOperation
  • BALL::Exception::IncompatibleIterators
  • BALL::Exception::IndexOverflow
  • BALL::Exception::IndexUnderflow
  • BALL::Exception::InvalidArgument
  • BALL::Exception::InvalidFormat
  • BALL::Exception::InvalidIterator
  • BALL::Exception::InvalidOption
  • BALL::Exception::InvalidRange
  • BALL::Exception::InvalidSize
  • BALL::Exception::NoBufferAvailable
  • BALL::Exception::NotImplemented
  • BALL::Exception::NullPointer
  • BALL::Exception::OutOfGrid
  • BALL::Exception::OutOfMemory
  • BALL::Exception::OutOfRange
  • BALL::Exception::ParseError
  • BALL::Exception::Postcondition
  • BALL::Exception::Precondition
  • BALL::Exception::SizeUnderflow
  • BALL::Exception::TooManyBonds
  • BALL::Exception::TooManyErrors
  • BALL::File::File::CannotWrite
  • BALL::FragmentDB::FragmentDB::NoFragmentNode
  • BALL::HashMap< Key, T >::HashMap::IllegalKey
  • BALL::HashSet< Key >::HashSet::IllegalKey
  • BALL::Substring::Substring::InvalidSubstring
  • BALL::Substring::Substring::UnboundSubstring
  • BALL::TCPTransfer::TCPTransfer::TransferFailed
  • BALL::VIEW::ColorUnit::ColorUnit::NotInHexFormat
  • BALL::VIEW::GLDisplayList::GLDisplayList::DisplayListRedeclaration
  • BALL::VIEW::GLDisplayList::GLDisplayList::NestedDisplayList
  • BALL::VIEW::GLDisplayList::GLDisplayList::NoDisplayListAvailable
  • BALL::VIEW::GLRenderer::GLRenderer::WrongModes
  • BALL::VIEW::ServerWidget::ServerWidget::NotCompositeObject
• BALL::GeneralizedBornModel
• BALL::GeometricFit::GeometricFit::Option
• BALL::GeometricFit::GeometricFit::Peak_
• BALL::GeometricFit::GeometricFit::RotationAngles_
• BALL::VIEW::GeometricObject
  • BALL::VIEW::Box
  • BALL::VIEW::Disc
  • BALL::VIEW::GridVisualisation
  • BALL::VIEW::Label
  • BALL::VIEW::Line
  • BALL::VIEW::Mesh
  • BALL::VIEW::MultiLine
  • BALL::VIEW::Point
  • BALL::VIEW::QuadMesh
  • BALL::VIEW::SimpleBox
  • BALL::VIEW::Sphere
  • BALL::VIEW::Tube
  • BALL::VIEW::TwoColoredLine
  • BALL::VIEW::TwoColoredTube
• BALL::VIEW::GLDisplayList
• BALL::Exception::GlobalExceptionHandler
• BALL::GlobalInitializer
• BALL::Gradient
• BALL::GraphEdge< Vertex, Edge, Face >
• BALL::GraphEdge< RSVertex, RSEdge, RSFace >
  • BALL::RSEdge
• BALL::GraphEdge< SASVertex, SASEdge, SASFace >
  • BALL::SASEdge
• BALL::GraphEdge< SESVertex, SESEdge, SESFace >
  • BALL::SESEdge
• BALL::GraphEdge< TrianglePoint, TriangleEdge, Triangle >
  • BALL::TriangleEdge
• BALL::GraphFace< Vertex, Edge, Face >
• BALL::GraphFace< SASVertex, SASEdge, SASFace >
  • BALL::SASFace
• BALL::GraphFace< SESVertex, SESEdge, SESFace >
  • BALL::SESFace
• BALL::GraphTriangle< Vertex, Edge, Face >
• BALL::GraphTriangle< RSVertex, RSEdge, RSFace >
  • BALL::RSFace
• BALL::GraphTriangle< TrianglePoint, TriangleEdge, Triangle >
  • BALL::Triangle
• BALL::GraphVertex< Vertex, Edge, Face >
• BALL::GraphVertex< RSVertex, RSEdge, RSFace >
  • BALL::RSVertex
• BALL::GraphVertex< SASVertex, SASEdge, SASFace >
  • BALL::SASVertex
• BALL::GraphVertex< SESVertex, SESEdge, SESFace >
  • BALL::SESVertex
• BALL::GraphVertex< TrianglePoint, TriangleEdge, Triangle >
  • BALL::TrianglePoint
• BALL::VIEW::GridVisualizationDialog
• BALL::HashFunction< T >
• BALL::HashGrid3< Item >
• BALL::HashGridBox3< Item >
• BALL::HashGridBox3< Item >::HashGridBox3::DataItem
• BALL::HashMap< Key, T >
• BALL::HashMap< String, String >
  • BALL::StringHashMap< String >
    • BALL::Options
• BALL::HashMap< String, Value >
  • BALL::StringHashMap< Value >
• BALL::HashSet< Key >
• BALL::HashSet< RSEdge * >
• BALL::HashSet< RSFace * >
• BALL::HashSet< SASEdge * >
• BALL::HashSet< SASFace * >
• BALL::HashSet< SESEdge * >
• BALL::HashSet< SESFace * >
• BALL::HashSet< Triangle * >
• BALL::HashSet< TriangleEdge * >
• BALL::HybridisationProcessor::HybridisationProcessor::AtomNames_
• BALL::HybridisationProcessor::HybridisationProcessor::Default
• BALL::HybridisationProcessor::HybridisationProcessor::Elements_
• BALL::HybridisationProcessor::HybridisationProcessor::Option
• BALL::HydrogenBond
• BALL::HydrogenBond::HydrogenBond::Default
• BALL::INIFile
• BALL::INIFile::INIFile::IteratorTraits_
• BALL::INIFile::INIFile::Section
• BALL::Kekuliser
• BALL::VIEW::LightSource
• BALL::Limits< T >
• BALL::LineSearch
• BALL::Lipophilic
• BALL::Lipophilic::Lipophilic::Default
• BALL::Lipophilic::Lipophilic::Option
• BALL::List< Value >
• BALL::List< Composite * >
  • BALL::PyCompositeList
• BALL::List< Index >
  • BALL::PyIndexList
• BALL::List< PT >
  • BALL::PeakList< PT >
• BALL::VIEW::LogEvent
• BALL::LogStream
• BALL::LogStreamBuf
• BALL::MD5Hash
• BALL::VIEW::MeshBuffer
• BALL::VIEW::Message
  • BALL::VIEW::CompositeMessage
  • BALL::VIEW::CreateRepresentationMessage
  • BALL::VIEW::DatasetMessage
  • BALL::VIEW::DeselectControlsMessage
  • BALL::VIEW::DockingFinishedMessage
  • BALL::VIEW::GenericSelectionMessage
    • BALL::VIEW::ControlSelectionMessage
  • BALL::VIEW::GeometricObjectSelectionMessage
  • BALL::VIEW::MolecularTaskMessage
  • BALL::VIEW::NewSelectionMessage
  • BALL::VIEW::RegisterHelpSystemMessage
  • BALL::VIEW::RepresentationMessage
  • BALL::VIEW::SceneMessage
  • BALL::VIEW::ShowDisplayPropertiesMessage
• BALL::VIEW::MessageEvent
• BALL::MicroCanonicalMD::MicroCanonicalMD::AuxFactors
• BALL::MMFF94::MMFF94::Default
• BALL::MMFF94::MMFF94::Option
• BALL::MMFF94AtomType
• BALL::MMFF94ParametersBase
  • BALL::MMFF94AtomTypeEquivalences
  • BALL::MMFF94AtomTypes
  • BALL::MMFF94BendParameters
  • BALL::MMFF94ESParameters
  • BALL::MMFF94PlaneParameters
  • BALL::MMFF94StretchBendParameters
  • BALL::MMFF94StretchParameters
  • BALL::MMFF94TorsionParameters
  • BALL::MMFF94VDWParameters
• BALL::MMFF94StretchBend::MMFF94StretchBend::Bend
• BALL::MMFF94Torsion::MMFF94Torsion::Torsion
• BALL::VIEW::ModelInformation
• BALL::MOL2File::MOL2File::SetStruct
• BALL::MolecularDynamics
  • BALL::CanonicalMD
  • BALL::MicroCanonicalMD
• BALL::MolecularDynamics::MolecularDynamics::Option
• BALL::MoleculeAssembler
• BALL::MOLFile::MOLFile::Property
• BALL::MolFileFactory
• BALL::VIEW::MultiColorExtension
  • BALL::VIEW::Mesh
  • BALL::VIEW::MultiLine
  • BALL::VIEW::QuadMesh
• BALL::MutableConstant< DataType >
• BALL::MutablePower< Function, DataType >
• BALL::NMRAtomData
• BALL::NodeItem< Node, Edge >
• BALL::NonpolarSolvation
• BALL::NotificationTarget< NotificationSource >
• BALL::NumericalIntegrator< Function, DataType >
• BALL::NumericalIntegrator< Function, DataType >
  • BALL::RombergIntegrator< Function, DataType >
• BALL::NumericalSAS::NumericalSAS::Default
• BALL::NumericalSAS::NumericalSAS::Option
• BALL::ObjectCreator
  • BALL::MoleculeObjectCreator
• BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Default
• BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Option
• BALL::Pair6_12RDFIntegrator::Pair6_12RDFIntegrator::Option
• BALL::PairExpInteractionEnergyProcessor::PairExpInteractionEnergyProcessor::Default
• BALL::PairExpInteractionEnergyProcessor::PairExpInteractionEnergyProcessor::Option
• BALL::PairExpRDFIntegrator::PairExpRDFIntegrator::Option
• BALL::Parameters
  • BALL::ForceFieldParameters
• BALL::ParameterSection
  • BALL::AtomTypes
  • BALL::CharmmEEF1
  • BALL::ClaverieParameter
  • BALL::CosineTorsion
  • BALL::LennardJones
  • BALL::Potential1210
  • BALL::QuadraticAngleBend
  • BALL::QuadraticBondStretch
  • BALL::QuadraticImproperTorsion
  • BALL::RDFParameter
  • BALL::RDFSection
  • BALL::ResidueTorsions
  • BALL::SolventParameter
  • BALL::Templates
• BALL::ParsedFunction< arg >
• BALL::VIEW::ParsedFunctionDialog
• BALL::Path
• BALL::PCMCavFreeEnergyProcessor::PCMCavFreeEnergyProcessor::Default
• BALL::PCMCavFreeEnergyProcessor::PCMCavFreeEnergyProcessor::Option
• BALL::PDBFile::PDBFile::Default
• BALL::PDBFile::PDBFile::Option
• BALL::PDBInfo
• BALL::PDBRecords
• BALL::Peptides::PeptideBuilder
  • BALL::VIEW::PeptideDialog
• BALL::PeriodicBoundary
• BALL::PeriodicBoundary::PeriodicBoundary::Default
• BALL::PersistenceManager
  • BALL::TextPersistenceManager
  • BALL::XDRPersistenceManager
• BALL::PiecewiseFunction
  • BALL::PiecewisePolynomial
• BALL::PierottiCavFreeEnergyProcessor::PierottiCavFreeEnergyProcessor::Default
• BALL::PierottiCavFreeEnergyProcessor::PierottiCavFreeEnergyProcessor::Option
• BALL::PluginHandler
  • BALL::VIEW::InputDevPluginHandler
• BALL::PolarSolvation
• BALL::PreciseTime
• BALL::VIEW::Preferences
• BALL::VIEW::PreferencesEntry
  • BALL::VIEW::AmberConfigurationDialog
  • BALL::VIEW::AssignBondOrderConfigurationDialog
  • BALL::VIEW::CharmmConfigurationDialog
  • BALL::VIEW::ColoringSettingsDialog
  • BALL::VIEW::DisplayProperties
  • BALL::VIEW::DockDialog
  • BALL::VIEW::EditSettings
  • BALL::VIEW::FDPBDialog
  • BALL::VIEW::GeometricFitDialog
  • BALL::VIEW::LightSettings
  • BALL::VIEW::MainControlPreferences
  • BALL::VIEW::MaterialSettings
  • BALL::VIEW::MinimizationDialog
  • BALL::VIEW::MMFF94ConfigurationDialog
  • BALL::VIEW::ModelSettingsDialog
  • BALL::VIEW::MolecularDynamicsDialog
  • BALL::VIEW::NetworkPreferences
  • BALL::VIEW::PluginDialog
  • BALL::VIEW::PythonSettings
  • BALL::VIEW::ServerPreferences
  • BALL::VIEW::ShortcutDialog
  • BALL::VIEW::StageSettings
• BALL::VIEW::PreferencesEntry::PreferencesEntry::ExtendedPreferencesObject
  • BALL::VIEW::HotkeyTable
  • BALL::VIEW::QColorTable
  • BALL::VIEW::ShortcutRegistry
• BALL::PreferencesObject
  • BALL::PluginManager
• BALL::Processor
• BALL::Product< First, Second, DataType >
• BALL::PropertyManager
  • BALL::Atom
  • BALL::AtomContainer
  • BALL::Bond
  • BALL::PDBFile
  • BALL::Peak< PositionType >
  • BALL::VIEW::ModelProcessor
    • BALL::VIEW::AddBackboneModel
      • BALL::VIEW::AddCartoonModel
    • BALL::VIEW::AddSurfaceModel
    • BALL::VIEW::AtomBondModelBaseProcessor
      • BALL::VIEW::AddBallAndStickModel
      • BALL::VIEW::AddLineModel
      • BALL::VIEW::AddVanDerWaalsModel
      • BALL::VIEW::HBondModelProcessor
    • BALL::VIEW::ForceModel
    • BALL::VIEW::LabelModel
  • BALL::VIEW::Representation
• BALL::PTE_
• BALL::VIEW::PTEDialog
• BALL::PyColorRGBAVector
• BALL::PyDatasetVector
• BALL::PyInterpreter
• BALL::VIEW::PythonHighlighter
• BALL::Quadruple< T1, T2, T3, T4 >
• BALL::RadialDistributionFunction
• BALL::RandomAccessIterator< Container, DataType, Position, Traits >
• BALL::RandomNumberGenerator
• BALL::RDFIntegrator
  • BALL::Pair6_12RDFIntegrator
  • BALL::PairExpRDFIntegrator
• BALL::Reciprocal< Function, DataType >
• BALL::ReducedSurface
• BALL::RegularExpression
• BALL::ReissCavFreeEnergyProcessor::ReissCavFreeEnergyProcessor::Default
• BALL::ReissCavFreeEnergyProcessor::ReissCavFreeEnergyProcessor::Option
• BALL::VIEW::RenderSetup
• BALL::VIEW::RenderWindow< taPixelDatatype >
• BALL::VIEW::RenderWindow< float >
  • BALL::VIEW::GLOffscreenTarget
  • BALL::VIEW::GLRenderWindow
• BALL::ResidueRotamerSet
• BALL::ResidueTorsions::ResidueTorsions::Data
• BALL::VIEW::Resolution
• BALL::RingAnalyser
• BALL::RingClusterer
• BALL::RingFinder
• BALL::RingPerceptionProcessor::RingPerceptionProcessor::Default
• BALL::RingPerceptionProcessor::RingPerceptionProcessor::Option
• BALL::RMSDMinimizer
• BALL::Rotamer
• BALL::RotamerLibrary
• BALL::RotationalEntropyLoss
• BALL::RotationalEntropyLoss::RotationalEntropyLoss::Default
• BALL::RotationalEntropyLoss::RotationalEntropyLoss::Option
• BALL::RSComputer
• BALL::RSConstructor
• BALL::RuleEvaluator
• BALL::SampleCondition
• BALL::SASTriangulator
• BALL::ScoringBaseFunction
  • BALL::FermiBaseFunction
  • BALL::LinearBaseFunction
• BALL::ScoringTypes
• BALL::SDGenerator
• BALL::SDGenerator::SDGenerator::Default
• BALL::SDGenerator::SDGenerator::Option
• BALL::VIEW::SDWidget::SDWidget::Default
• BALL::VIEW::SDWidget::SDWidget::Option
• BALL::Selectable
  • BALL::Composite
• BALL::SESComputer
• BALL::SESSingularityCleaner
• BALL::SESTriangulator
• BALL::VIEW::SetCamera
• BALL::VIEW::SetClippingPlane
• BALL::ShiftedLVMMMinimizer::ShiftedLVMMMinimizer::Option
• BALL::ShiftReferenceElement
• BALL::ShiftReferenceSet
• BALL::SLICKEnergy
• BALL::SLICKEnergy::SLICKEnergy::Default
• BALL::SLICKEnergy::SLICKEnergy::Option
• BALL::SLICKScore
• BALL::SLICKScore::SLICKScore::Default
• BALL::SLICKScore::SLICKScore::Option
• BALL::SmartsMatcher::SmartsMatcher::RecStruct_
• BALL::SmartsMatcher::SmartsMatcher::RecStructCore_
• BALL::SmartsMatcher::SmartsMatcher::RecStructPool_
• BALL::SmartsParser
• BALL::SmartsParser::SmartsParser::SPAtom
• BALL::SmartsParser::SmartsParser::SPAtom::SmartsParser::SPAtom::Property
• BALL::SmartsParser::SmartsParser::SPAtom::SmartsParser::SPAtom::PropertyValue
• BALL::SmartsParser::SmartsParser::SPBond
• BALL::SmartsParser::SmartsParser::SPEdge
• BALL::SmartsParser::SmartsParser::SPNode
• BALL::SmartsParser::SmartsParser::State
• BALL::SnapShot
• BALL::SnapShotManager
• BALL::SnapShotManager::SnapShotManager::Default
• BALL::SnapShotManager::SnapShotManager::Option
• BALL::SolventAccessibleSurface
• BALL::SolventAtomDescriptor
• BALL::SolventDescriptor
• BALL::SolventExcludedSurface
• BALL::Spectrum< DataT, PeakT, PositionT >
• BALL::SquareFunction< Function, DataType >
• BALL::VIEW::Stage
• BALL::VIEW::Stage::Stage::RaytracingMaterial
• BALL::StrangLBFGSMinimizer::StrangLBFGSMinimizer::Option
• BALL::String
• BALL::Substring
• BALL::Subtraction< First, Second, DataType >
• BALL::TAngle< T >
• BALL::TBox3< T >
• BALL::TBox3< float >
  • BALL::VIEW::Box
• BALL::TCircle3< T >
• BALL::TCircle3< float >
  • BALL::VIEW::Disc
• BALL::TContour< T >
• BALL::TContourLine< T >
• BALL::TContourSurface< T >::TContourSurface::Cube
• BALL::TCPIOStream
• BALL::TCPServer
  • BALL::TCPServerThread
    • BALL::VIEW::ServerWidget::ServerWidget::BALLViewServer
• BALL::TCPTransfer
• BALL::Timer
• BALL::TimeStamp
• BALL::TLine3< T >
• BALL::TMatrix4x4< T >
• BALL::TMutex< MutexType >
• BALL::TMutexLocker< MutexLockerType, MutexType >
• BALL::TPlane3< T >
• BALL::TQuaternion< T >
• BALL::TransformationManager
• BALL::TReadLocker< ReadLockerType, ReadWriteLockType >
• BALL::TReadWriteLock< ReadWriteLockType >
• BALL::VIEW::TreeWidget
• BALL::TRegularData1D< ValueType >
• BALL::TRegularData1D< ValueType >::TRegularData1D::BlockValueType
• BALL::TRegularData1D< std::complex< ComplexTraits::ComplexPrecision > >
  • BALL::TFFT1D< ComplexTraits >
• BALL::TRegularData2D< ValueType >
• BALL::TRegularData2D< ValueType >::TRegularData2D::BlockValueType
• BALL::TRegularData2D< ValueType >::TRegularData2D::IndexType
• BALL::TRegularData2D< std::complex< ComplexTraits::ComplexPrecision > >
  • BALL::TFFT2D< ComplexTraits >
• BALL::TRegularData3D< ValueType >
• BALL::TRegularData3D< ValueType >::TRegularData3D::BlockValueType
• BALL::TRegularData3D< ValueType >::TRegularData3D::IndexType
• BALL::TRegularData3D< std::complex< ComplexTraits::ComplexPrecision > >
  • BALL::TFFT3D< ComplexTraits >
• BALL::TriangulatedSurface
  • BALL::TriangulatedSAS
  • BALL::TriangulatedSES
  • BALL::TriangulatedSphere
• BALL::Triple< T1, T2, T3 >
• BALL::TRRFile::TRRFile::TRRHeader
• BALL::TSimpleBox3< T >
  • BALL::VIEW::SimpleBox
• BALL::TSimpleBox3< float >
• BALL::TSphere3< T >
• BALL::TSphere3< float >
  • BALL::VIEW::Sphere
• BALL::TSurface< T >
• BALL::TSurface< float >
  • BALL::TContourSurface< T >
  • BALL::VIEW::Mesh
• BALL::TVector3< T >
• BALL::TVector3< float >
• BALL::TVector4< T >
• BALL::TWriteLocker< WriteLockerType, ReadWriteLockType >
• BALL::UCK
• BALL::UhligCavFreeEnergyProcessor::UhligCavFreeEnergyProcessor::Default
• BALL::UhligCavFreeEnergyProcessor::UhligCavFreeEnergyProcessor::Option
• BALL::UnaryFunctor< ArgumentType, ResultType >
• BALL::UnaryFunctor< Atom, Processor::Result >
  • BALL::UnaryProcessor< Atom >
    • BALL::AssignBaseProcessor
      • BALL::AssignTypeNameProcessor
      • BALL::AssignTypeProcessor
    • BALL::AssignRadiusProcessor
      • BALL::AssignChargeProcessor
    • BALL::BoundingBoxProcessor
    • BALL::ClearChargeProcessor
    • BALL::ClearRadiusProcessor
    • BALL::GeometricCenterProcessor
    • BALL::MMFF94ChargeProcessor
    • BALL::RuleProcessor
      • BALL::ChargeRuleProcessor
      • BALL::RadiusRuleProcessor
      • BALL::TypenameRuleProcessor
      • BALL::TypeRuleProcessor
    • BALL::SurfaceProcessor
    • BALL::TransformationProcessor
      • BALL::StructureMapper
    • BALL::TranslationProcessor
• BALL::UnaryFunctor< AtomContainer, Processor::Result >
  • BALL::UnaryProcessor< AtomContainer >
    • BALL::AromaticityProcessor
    • BALL::AssignBondOrderProcessor
    • BALL::BuildBondsProcessor
    • BALL::Descriptor
      • BALL::ConnectivityBase
        • BALL::BalabanIndexJ
        • BALL::ZagrebIndex
      • BALL::PartialChargeBase
        • BALL::RelNegativePartialCharge
        • BALL::RelPositivePartialCharge
        • BALL::TotalNegativePartialCharge
        • BALL::TotalPositivePartialCharge
      • BALL::SimpleBase
        • BALL::AtomicPolarizabilities
        • BALL::AtomInformationContent
        • BALL::BondPolarizabilities
        • BALL::FormalCharge
        • BALL::MeanAtomInformationContent
        • BALL::MolecularWeight
        • BALL::NumberOfAromaticAtoms
        • BALL::NumberOfAromaticBonds
        • BALL::NumberOfAtoms
        • BALL::NumberOfBonds
        • BALL::NumberOfBoron
        • BALL::NumberOfBromine
        • BALL::NumberOfCarbon
        • BALL::NumberOfChlorine
        • BALL::NumberOfDoubleBonds
        • BALL::NumberOfFlourine
        • BALL::NumberOfHeavyAtoms
        • BALL::NumberOfHeavyBonds
        • BALL::NumberOfHydrogen
        • BALL::NumberOfHydrogenBondAcceptors
        • BALL::NumberOfHydrogenBondDonors
        • BALL::NumberOfHydrophobicAtoms
        • BALL::NumberOfIodine
        • BALL::NumberOfNitrogen
        • BALL::NumberOfOxygen
        • BALL::NumberOfPhosphorus
        • BALL::NumberOfRotatableBonds
        • BALL::NumberOfRotatableSingleBonds
        • BALL::NumberOfSingleBonds
        • BALL::NumberOfSulfur
        • BALL::NumberOfTripleBonds
        • BALL::PrincipalMomentOfInertia
        • BALL::PrincipalMomentOfInertiaX
        • BALL::PrincipalMomentOfInertiaY
        • BALL::PrincipalMomentOfInertiaZ
        • BALL::RelNumberOfRotatableBonds
        • BALL::RelNumberOfRotatableSingleBonds
        • BALL::SizeOfSSSR
        • BALL::VertexAdjacency
        • BALL::VertexAdjacencyEquality
      • BALL::SurfaceBase
        • BALL::Density
        • BALL::HydrophobicVdWSurface
        • BALL::NegativePolarVdWSurface
        • BALL::NegativeVdWSurface
        • BALL::PolarVdWSurface
        • BALL::PositivePolarVdWSurface
        • BALL::PositiveVdWSurface
        • BALL::RelHydrophobicVdWSurface
        • BALL::RelNegativePolarVdWSurface
        • BALL::RelNegativeVdWSurface
        • BALL::RelPolarVdWSurface
        • BALL::RelPositivePolarVdWSurface
        • BALL::RelPositiveVdWSurface
        • BALL::VdWSurface
        • BALL::VdWVolume
    • BALL::EnergyProcessor
      • BALL::ComposedEnergyProcessor
      • BALL::Pair6_12InteractionEnergyProcessor
      • BALL::PairExpInteractionEnergyProcessor
      • BALL::PCMCavFreeEnergyProcessor
      • BALL::PierottiCavFreeEnergyProcessor
      • BALL::ReissCavFreeEnergyProcessor
      • BALL::UhligCavFreeEnergyProcessor
    • BALL::HybridisationProcessor
    • BALL::PartialChargeProcessor
    • BALL::RingPerceptionProcessor
• BALL::UnaryFunctor< Composite, Processor::Result >
  • BALL::UnaryProcessor< Composite >
    • BALL::AddHydrogenProcessor
    • BALL::AssignShiftProcessor
    • BALL::BindingPocketProcessor
    • BALL::FragmentDistanceCollector
    • BALL::HBondProcessor
    • BALL::SecondaryStructureProcessor
    • BALL::Selector
    • BALL::ShiftModule
      • BALL::AnisotropyShiftProcessor
      • BALL::ClearShiftProcessor
      • BALL::CreateSpectrumProcessor
      • BALL::EFShiftProcessor
      • BALL::Experiment< PeakListType >
      • BALL::HaighMallionShiftProcessor
      • BALL::HBondShiftProcessor
      • BALL::JohnsonBoveyShiftProcessor
      • BALL::RandomCoilShiftProcessor
      • BALL::ShiftModel
      • BALL::Experiment< PeakList1D >
        • BALL::SimpleExperiment1D
    • BALL::VIEW::ModelProcessor
• BALL::UnaryFunctor< Fragment, Processor::Result >
  • BALL::UnaryProcessor< Fragment >
    • BALL::FragmentDB::FragmentDB::BuildBondsProcessor
    • BALL::FragmentDB::FragmentDB::NormalizeNamesProcessor
    • BALL::ReconstructFragmentProcessor
• BALL::UnaryFunctor< GeometricObject *, Processor::Result >
  • BALL::UnaryProcessor< GeometricObject * >
    • BALL::VIEW::ColorProcessor
      • BALL::VIEW::AtomDistanceColorProcessor
      • BALL::VIEW::CustomColorProcessor
      • BALL::VIEW::ElementColorProcessor
      • BALL::VIEW::InterpolateColorProcessor
        • BALL::VIEW::AtomChargeColorProcessor
        • BALL::VIEW::ForceColorProcessor
        • BALL::VIEW::OccupancyColorProcessor
        • BALL::VIEW::TemperatureFactorColorProcessor
      • BALL::VIEW::ResidueNameColorProcessor
      • BALL::VIEW::ResidueNumberColorProcessor
      • BALL::VIEW::ResidueTypeColorProcessor
      • BALL::VIEW::SecondaryStructureColorProcessor
• BALL::UnaryFunctor< Residue, Processor::Result >
  • BALL::UnaryProcessor< Residue >
    • BALL::ResidueChecker
• BALL::UnaryFunctor< T, Processor::Result >
  • BALL::UnaryProcessor< T >
• BALL::UnaryPredicate< T >
• BALL::UnaryPredicate< Atom >
  • BALL::ExpressionPredicate
    • BALL::AromaticBondsPredicate
    • BALL::AtomNamePredicate
    • BALL::AtomTypePredicate
    • BALL::AxialPredicate
    • BALL::BackBonePredicate
    • BALL::ChainPredicate
    • BALL::ChargePredicate
    • BALL::Conformation4C1Predicate
    • BALL::ConnectedToPredicate
    • BALL::ElementPredicate
    • BALL::FalsePredicate
    • BALL::InRingPredicate
    • BALL::MoleculePredicate
    • BALL::NucleotidePredicate
    • BALL::NumberOfBondsPredicate
      • BALL::DoubleBondsPredicate
        • BALL::TripleBondsPredicate
      • BALL::SingleBondsPredicate
    • BALL::ProteinPredicate
    • BALL::ResidueIDPredicate
    • BALL::ResiduePredicate
    • BALL::SecondaryStructurePredicate
    • BALL::SelectedPredicate
    • BALL::SMARTSPredicate
    • BALL::SolventPredicate
    • BALL::Sp2HybridizedPredicate
    • BALL::Sp3HybridizedPredicate
    • BALL::SpHybridizedPredicate
    • BALL::TruePredicate
• BALL::UnaryPredicate< Composite >
  • BALL::KernelPredicate< T >
• BALL::VanDerWaals
• BALL::VersionInfo
• BALL::VIEW::Vertex
  • BALL::VIEW::Label
  • BALL::VIEW::Point
• BALL::VIEW::Vertex2
  • BALL::VIEW::Line
  • BALL::VIEW::Tube
  • BALL::VIEW::TwoColoredLine
  • BALL::VIEW::TwoColoredTube
• BALL::Visitor< Host >
• BALL::Visitor< Composite >
  • BALL::MolecularInformation