#include <solventDescriptor.h>
Public Member Functions |
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Constructors and destructor
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SolventDescriptor () | |
Default constructor. |
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SolventDescriptor (const SolventDescriptor &solvent) | |
Copy constructor. |
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SolventDescriptor (const String &name, float number_density, const std::vector< SolventAtomDescriptor > &atom_list) | |
Detailed constructor. |
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virtual | ~SolventDescriptor () |
Destructor. |
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Assignment
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const SolventDescriptor & | operator= (const SolventDescriptor &descriptor) |
Assignment operator. |
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void | clear () |
Clear function. |
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Accessors
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void | setName (const String &name) |
Set the name. |
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const String & | getName () const |
Get the name. |
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void | setNumberDensity (float number_density) |
Set the number density. |
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float | getNumberDensity () const |
Get the number density of this
solvent (in $ A^{-3}$). |
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void | setSolventAtomDescriptorList (const std::vector< SolventAtomDescriptor > &solvent_atoms) |
Set the list of solvent atom
descriptors. |
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const std::vector < SolventAtomDescriptor > & |
getSolventAtomDescriptorList () const |
Get the list of atom
descriptors. |
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std::vector < SolventAtomDescriptor > & |
getSolventAtomDescriptorList () |
Get the list of atom
descriptors. |
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Size | getNumberOfAtomTypes () const |
Get the number of different atom
types within a solvent molecule. |
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const SolventAtomDescriptor & | getAtomDescriptor (Position index) const throw (Exception::IndexOverflow) |
Get atom decriptions by
index. |
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SolventAtomDescriptor & | getAtomDescriptor (Position index) throw (Exception::IndexOverflow) |
Get atom decriptions by
index. |
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Predicates
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bool | isValid () const |
Validity. |
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bool | operator== (const SolventDescriptor &descriptor) const |
Equality operator. |
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Protected Attributes |
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String | name_ |
float | number_density_ |
std::vector < SolventAtomDescriptor > |
solvent_atoms_ |
bool | valid_ |
The calculation of van-der-Waals energies requires information about the solvent which is stored in this structure.