|
buildVectorOfNonBondedAtomPairs(const std::vector<
std::pair< Atom *, Atom * > >
&atom_vector) |
BALL::CharmmNonBonded |
[virtual] |
|
CharmmNonBonded() |
BALL::CharmmNonBonded |
|
|
CharmmNonBonded(ForceField &force_field) |
BALL::CharmmNonBonded |
|
|
CharmmNonBonded(const CharmmNonBonded
&charmm_non_bonded) |
BALL::CharmmNonBonded |
|
|
clear() |
BALL::CharmmNonBonded |
[virtual] |
|
determineMethodOfAtomPairGeneration() |
BALL::CharmmNonBonded |
[virtual] |
| electrostatic_energy_ (defined in BALL::CharmmNonBonded) |
BALL::CharmmNonBonded |
[protected] |
| energy_ (defined in BALL::ForceFieldComponent) |
BALL::ForceFieldComponent |
[protected] |
| force_field_ (defined in BALL::ForceFieldComponent) |
BALL::ForceFieldComponent |
[protected] |
|
ForceFieldComponent() |
BALL::ForceFieldComponent |
|
|
ForceFieldComponent(ForceField &force_field) |
BALL::ForceFieldComponent |
|
|
ForceFieldComponent(const ForceFieldComponent
&force_field_component) |
BALL::ForceFieldComponent |
|
|
getElectrostaticEnergy() const |
BALL::CharmmNonBonded |
[virtual] |
|
getEnergy() const |
BALL::ForceFieldComponent |
[virtual] |
|
getForceField() const |
BALL::ForceFieldComponent |
|
|
getName() const |
BALL::ForceFieldComponent |
|
|
getSolvationEnergy() const |
BALL::CharmmNonBonded |
[virtual] |
|
getVdwEnergy() const |
BALL::CharmmNonBonded |
[virtual] |
| isEnabled() const (defined in BALL::ForceFieldComponent) |
BALL::ForceFieldComponent |
|
|
operator=(const CharmmNonBonded
&charmm_non_bonded) |
BALL::CharmmNonBonded |
|
|
operator==(const CharmmNonBonded
&charmm_non_bonded) |
BALL::CharmmNonBonded |
|
| setEnabled(bool state) (defined in BALL::ForceFieldComponent) |
BALL::ForceFieldComponent |
|
|
setForceField(ForceField &force_field) |
BALL::ForceFieldComponent |
|
|
setName(const String &name) |
BALL::ForceFieldComponent |
|
|
setup() |
BALL::CharmmNonBonded |
[virtual] |
| solvation_energy_ (defined in BALL::CharmmNonBonded) |
BALL::CharmmNonBonded |
[protected] |
|
update() |
BALL::ForceFieldComponent |
[virtual] |
|
updateEnergy() |
BALL::CharmmNonBonded |
[virtual] |
|
updateForces() |
BALL::CharmmNonBonded |
[virtual] |
| vdw_energy_ (defined in BALL::CharmmNonBonded) |
BALL::CharmmNonBonded |
[protected] |
|
~CharmmNonBonded() |
BALL::CharmmNonBonded |
[virtual] |
|
~ForceFieldComponent() |
BALL::ForceFieldComponent |
[virtual] |
