BALL::Peptides::PeptideBuilder Member List

This is the complete list of members for BALL::Peptides::PeptideBuilder, including all inherited members.

addAminoAcid(const String &type, const Angle &phi=Angle(-47., false), const Angle &psi=Angle(-58., false), const Angle &omega=Angle(180., false))	BALL::Peptides::PeptideBuilder
addAminoAcid(const AminoAcidDescriptor &aad)	BALL::Peptides::PeptideBuilder
chainname_ (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
construct()	BALL::Peptides::PeptideBuilder
createResidue_(const String &type, const int id)	BALL::Peptides::PeptideBuilder	[protected]
fragment_db_ (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
getAtomByName_(Residue &res, const String &name) (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
getChainName() const	BALL::Peptides::PeptideBuilder
getFragmentDB() const (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder
getProteinName() const	BALL::Peptides::PeptideBuilder
insert_(Residue &resnew, Residue &resold) (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
is_proline_	BALL::Peptides::PeptideBuilder	[protected]
peptide_(Residue &resold, Residue &resnew) (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
PeptideBuilder()	BALL::Peptides::PeptideBuilder
PeptideBuilder(const std::vector< AminoAcidDescriptor > &sequence)	BALL::Peptides::PeptideBuilder
PeptideBuilder(const String &sequence, const Angle &phi=Angle(-47., false), const Angle &psi=Angle(-58., false), const Angle &omega=Angle(180., false))	BALL::Peptides::PeptideBuilder
PeptideBuilder(const PeptideBuilder &pc)	BALL::Peptides::PeptideBuilder
proteinname_ (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
sequence_ (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
setChainName(const String &name)	BALL::Peptides::PeptideBuilder
setFragmentDB(const FragmentDB *db) (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder
setOmega_(Residue &resold, Residue &residue, const Angle &omega) (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
setProteinName(const String &name)	BALL::Peptides::PeptideBuilder
transform_(const Angle &phi, const Angle &psi, Residue &resold, Residue &resnew) (defined in BALL::Peptides::PeptideBuilder)	BALL::Peptides::PeptideBuilder	[protected]
~PeptideBuilder()	BALL::Peptides::PeptideBuilder	[virtual]