|
all_small_beers_ |
BALL::RingPerceptionProcessor |
[protected, static] |
|
all_small_rings_ |
BALL::RingPerceptionProcessor |
[protected, static] |
| argument_pointer typedef (defined in BALL::UnaryFunctor<
AtomContainer, Processor::Result >) |
BALL::UnaryFunctor<
AtomContainer, Processor::Result > |
|
| argument_reference typedef (defined in BALL::UnaryFunctor<
AtomContainer, Processor::Result >) |
BALL::UnaryFunctor<
AtomContainer, Processor::Result > |
|
| argument_type typedef (defined in BALL::UnaryFunctor<
AtomContainer, Processor::Result >) |
BALL::UnaryFunctor<
AtomContainer, Processor::Result > |
|
| atom_to_tnode_ (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected, static] |
| BalducciPearlmanAlgorithm_(std::vector<
std::vector< Atom * > > &sssr, MolecularGraph
&graph) (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
| BalducciPearlmanRingSelector_(BitVector
bit_vector) (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected, static] |
| BCC_ (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
|
bond_to_index_ |
BALL::RingPerceptionProcessor |
[protected, static] |
|
calculateSSSR(vector< vector< Atom * > >
&sssr, AtomContainer &ac) |
BALL::RingPerceptionProcessor |
|
| checkEdges_(HashSet< Atom * >
&ring_set, AtomContainer &ac) (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
| const_argument_pointer typedef (defined in
BALL::UnaryFunctor<
AtomContainer, Processor::Result >) |
BALL::UnaryFunctor<
AtomContainer, Processor::Result > |
|
| const_argument_reference typedef (defined in
BALL::UnaryFunctor<
AtomContainer, Processor::Result >) |
BALL::UnaryFunctor<
AtomContainer, Processor::Result > |
|
| DFSBCC_(std::vector< MolecularGraph * >
&bccs, Size dfbi, HashMap< NodeItem< Index, Index
> *, Size > DFBIndex, NodeItem< Index, Index >
*v) (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
| FiguerasAlgorithm_(vector< vector< Atom *
> > &sssr, AtomContainer &ac) (defined in
BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
|
findAllBCC(std::vector< MolecularGraph * >
&bcc, MolecularGraph &graph) |
BALL::RingPerceptionProcessor |
|
| findAllBCC_(std::vector< MolecularGraph *
> &bcc, MolecularGraph &graph) (defined in
BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
|
finish() |
BALL::UnaryProcessor<
AtomContainer > |
[virtual] |
|
forwarded_rings_ |
BALL::RingPerceptionProcessor |
[protected, static] |
|
getAllSmallRings() const |
BALL::RingPerceptionProcessor |
|
| getRing_(Atom *n, HashSet< Atom * >
&ring_set) (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
| index_to_bond_ (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected, static] |
|
matrix_ |
BALL::RingPerceptionProcessor |
[protected, static] |
|
operator()(AtomContainer &ac) |
BALL::RingPerceptionProcessor |
[virtual] |
|
operator=(const RingPerceptionProcessor &rp) |
BALL::RingPerceptionProcessor |
|
| options (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
|
| P_ (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
| parents_ (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
| result_type typedef (defined in BALL::UnaryFunctor<
AtomContainer, Processor::Result >) |
BALL::UnaryFunctor<
AtomContainer, Processor::Result > |
|
|
RingPerceptionProcessor() |
BALL::RingPerceptionProcessor |
|
|
RingPerceptionProcessor(const RingPerceptionProcessor
&rp) |
BALL::RingPerceptionProcessor |
|
|
rings_ |
BALL::RingPerceptionProcessor |
[protected, static] |
|
setDefaultOptions() |
BALL::RingPerceptionProcessor |
|
|
start() |
BALL::UnaryProcessor<
AtomContainer > |
[virtual] |
|
tested_beers_ |
BALL::RingPerceptionProcessor |
[protected, static] |
|
tnode_to_atom_ |
BALL::RingPerceptionProcessor |
[protected, static] |
|
UnaryProcessor() |
BALL::UnaryProcessor<
AtomContainer > |
|
|
UnaryProcessor(const UnaryProcessor &) |
BALL::UnaryProcessor<
AtomContainer > |
|
| visited_ (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
| visited_bonds_ (defined in BALL::RingPerceptionProcessor) |
BALL::RingPerceptionProcessor |
[protected] |
|
~RingPerceptionProcessor() |
BALL::RingPerceptionProcessor |
[virtual] |
|
~UnaryProcessor() |
BALL::UnaryProcessor<
AtomContainer > |
[virtual] |
