|
addAminoAcid(const String &type, const Angle
&phi=Angle(-47., false), const Angle
&psi=Angle(-58., false), const Angle
&omega=Angle(180., false)) |
BALL::Peptides::PeptideBuilder |
|
|
addAminoAcid(const AminoAcidDescriptor &aad) |
BALL::Peptides::PeptideBuilder |
|
| ala (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| ala_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| all_amino_acids_ (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[protected, static] |
| alpha (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| angle_changed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| angles_group (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| arg (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| arg_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| asn (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| asn_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| asp (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| asp_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| back_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| beta (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| cancel_button (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| chainname_ (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
| close_button (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| close_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
|
construct() |
BALL::Peptides::PeptideBuilder |
|
|
createResidue_(const String &type, const int
id) |
BALL::Peptides::PeptideBuilder |
[protected] |
| cys (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| cys_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| eventFilter(QObject *object, QEvent *event)
(defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[virtual, slot] |
| fragment_db_ (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
| getAtomByName_(Residue &res, const String
&name) (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
|
getChainName() const |
BALL::Peptides::PeptideBuilder |
|
| getFragmentDB() const (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
|
| getProtein() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
|
|
getProteinName() const |
BALL::Peptides::PeptideBuilder |
|
| getSequence() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
|
| gln (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| gln_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| glu (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| glu_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| gly (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| gly_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| gridLayout (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| gridLayout1 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| gridLayout2 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| hboxLayout (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| hboxLayout1 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| hboxLayout2 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| hboxLayout3 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| hboxLayout4 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| his (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| his_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| ile (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| ile_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| insert_(char a) (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[protected] |
| insert_(Residue &resnew, Residue
&resold) (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
| insert_seq() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
|
is_proline_ |
BALL::Peptides::PeptideBuilder |
[protected] |
| isAminoAcid_(char a) const (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[protected] |
| leu (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| leu_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| lys (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| lys_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| met (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| met_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| omega (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| other (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| peptide_(Residue &resold, Residue
&resnew) (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
|
PeptideBuilder() |
BALL::Peptides::PeptideBuilder |
|
|
PeptideBuilder(const std::vector<
AminoAcidDescriptor > &sequence) |
BALL::Peptides::PeptideBuilder |
|
|
PeptideBuilder(const String &sequence, const Angle
&phi=Angle(-47., false), const Angle
&psi=Angle(-58., false), const Angle
&omega=Angle(180., false)) |
BALL::Peptides::PeptideBuilder |
|
|
PeptideBuilder(const PeptideBuilder &pc) |
BALL::Peptides::PeptideBuilder |
|
|
PeptideDialog(QWidget *parent=0, const char
*name="PeptideDialog", Qt::WFlags fl=0) |
BALL::VIEW::PeptideDialog |
|
| phe (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| phe_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| phi (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| pro (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| pro_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| prolineActivated() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| prolineDeactivated() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| protein_ (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[protected] |
| proteinname_ (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
| psi (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| retranslateUi(QDialog *PeptideDialogData)
(defined in Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| sequence (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| sequence_ (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
| ser (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| ser_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
|
setChainName(const String &name) |
BALL::Peptides::PeptideBuilder |
|
| setFragmentDB(const FragmentDB *db) (defined in
BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
|
| setOmega_(Residue &resold, Residue
&residue, const Angle &omega) (defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
|
setProteinName(const String &name) |
BALL::Peptides::PeptideBuilder |
|
| setupUi(QDialog *PeptideDialogData) (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| textLabel1 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| textLabel1_2 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| textLabel1_3 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| textLabel1_4 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| textLabel1_4_2 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| textLabel1_4_3 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| textLabel2 (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| thr (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| thr_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| transform_(const Angle &phi, const Angle
&psi, Residue &resold, Residue &resnew)
(defined in BALL::Peptides::PeptideBuilder) |
BALL::Peptides::PeptideBuilder |
[protected] |
| trp (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| trp_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| truncString_(String &data) (defined in
BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[protected] |
| tyr (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| tyr_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| val (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
| val_pressed() (defined in BALL::VIEW::PeptideDialog) |
BALL::VIEW::PeptideDialog |
[slot] |
| vboxLayout (defined in
Ui_PeptideDialogData) |
Ui_PeptideDialogData |
|
|
~PeptideBuilder() |
BALL::Peptides::PeptideBuilder |
[virtual] |
|
~PeptideDialog() |
BALL::VIEW::PeptideDialog |
|
