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ConsensusFeature Member List

This is the complete list of members for ConsensusFeature, including all inherited members.

addIDMatch(IdentificationData::ObservationMatchRef ref)BaseFeature
addMetaValues(const MetaInfoInterface &from)MetaInfoInterface
addRatio(const Ratio &r)ConsensusFeature
AnnotationState enum nameBaseFeature
BaseFeature()BaseFeature
BaseFeature(const BaseFeature &feature)=defaultBaseFeature
BaseFeature(BaseFeature &&feature) noexceptBaseFeatureinline
BaseFeature(const BaseFeature &rhs, UInt64 map_index)BaseFeature
BaseFeature(const Peak2D &point)BaseFeatureexplicit
BaseFeature(const RichPeak2D &point)BaseFeatureexplicit
BaseFeature(const FeatureHandle &fh)BaseFeatureexplicit
begin() constConsensusFeature
begin()ConsensusFeature
charge_BaseFeatureprotected
ChargeType typedefBaseFeature
clear()ConsensusFeature
clearMetaInfo()MetaInfoInterface
clearPrimaryID()BaseFeature
clearUniqueId()UniqueIdInterfaceinline
computeConsensus()ConsensusFeature
computeDechargeConsensus(const FeatureMap &fm, bool intensity_weighted_averaging=false)ConsensusFeature
computeMonoisotopicConsensus()ConsensusFeature
ConsensusFeature()ConsensusFeature
ConsensusFeature(const ConsensusFeature &rhs)=defaultConsensusFeature
ConsensusFeature(ConsensusFeature &&rhs)=defaultConsensusFeature
ConsensusFeature(const BaseFeature &feature)ConsensusFeatureexplicit
ConsensusFeature(UInt64 map_index, const Peak2D &element, UInt64 element_index)ConsensusFeature
ConsensusFeature(UInt64 map_index, const BaseFeature &element)ConsensusFeature
const_iterator typedefConsensusFeature
const_reverse_iterator typedefConsensusFeature
CoordinateType typedefPeak2D
createIfNotExists_()MetaInfoInterfaceinlineprotected
DIMENSION enum valuePeak2D
dimension_name_full_Peak2Dprotectedstatic
dimension_name_short_Peak2Dprotectedstatic
dimension_unit_full_Peak2Dprotectedstatic
dimension_unit_short_Peak2Dprotectedstatic
DimensionDescription enum namePeak2D
empty() constConsensusFeature
end() constConsensusFeature
end()ConsensusFeature
ensureUniqueId()UniqueIdInterface
FEATURE_ID_MULTIPLE_DIVERGENT enum valueBaseFeature
FEATURE_ID_MULTIPLE_SAME enum valueBaseFeature
FEATURE_ID_NONE enum valueBaseFeature
FEATURE_ID_SINGLE enum valueBaseFeature
fullDimensionName(UInt const dim)Peak2Dstatic
fullDimensionNameMZ()Peak2Dstatic
fullDimensionNameRT()Peak2Dstatic
fullDimensionUnit(UInt const dim)Peak2Dstatic
fullDimensionUnitMZ()Peak2Dstatic
fullDimensionUnitRT()Peak2Dstatic
getAnnotationState() constBaseFeature
getCharge() constBaseFeature
getFeatureList() constConsensusFeature
getFeatures() constConsensusFeature
getIDMatches() constBaseFeature
getIDMatches()BaseFeature
getIntensity() constPeak2Dinline
getIntensityRange() constConsensusFeature
getKeys(std::vector< String > &keys) constMetaInfoInterface
getKeys(std::vector< UInt > &keys) constMetaInfoInterface
getMetaValue(const String &name) constMetaInfoInterface
getMetaValue(const String &name, const DataValue &default_value) constMetaInfoInterface
getMetaValue(UInt index) constMetaInfoInterface
getMetaValue(UInt index, const DataValue &default_value) constMetaInfoInterface
getMZ() constPeak2Dinline
getPeptideIdentifications() constBaseFeature
getPeptideIdentifications()BaseFeature
getPosition() constPeak2Dinline
getPosition()Peak2Dinline
getPositionRange() constConsensusFeature
getPrimaryID() constBaseFeature
getQuality() constBaseFeature
getRatios() constConsensusFeature
getRatios()ConsensusFeature
getRT() constPeak2Dinline
getUniqueId() constUniqueIdInterfaceinline
getWidth() constBaseFeature
handles_ConsensusFeatureprivate
HandleSetType typedefConsensusFeature
hasInvalidUniqueId() constUniqueIdInterfaceinline
hasPrimaryID() constBaseFeature
hasValidUniqueId() constUniqueIdInterfaceinline
id_matches_BaseFeatureprotected
insert(const ConsensusFeature &cf)ConsensusFeature
insert(ConsensusFeature &&cf)ConsensusFeature
insert(const FeatureHandle &handle)ConsensusFeature
insert(FeatureHandle &&handle)ConsensusFeature
insert(const HandleSetType &handle_set)ConsensusFeature
insert(HandleSetType &&handle_set)ConsensusFeature
insert(UInt64 map_index, const Peak2D &element, UInt64 element_index)ConsensusFeature
insert(UInt64 map_index, const BaseFeature &element)ConsensusFeature
intensity_Peak2Dprotected
IntensityType typedefPeak2D
INVALID enum valueUniqueIdInterface
isMetaEmpty() constMetaInfoInterface
isValid(UInt64 unique_id)UniqueIdInterfaceinlinestatic
iterator typedefConsensusFeature
meta_MetaInfoInterfaceprotected
MetaInfoInterface()MetaInfoInterface
MetaInfoInterface(const MetaInfoInterface &rhs)MetaInfoInterface
MetaInfoInterface(MetaInfoInterface &&) noexceptMetaInfoInterface
metaRegistry()MetaInfoInterfacestatic
metaValueExists(const String &name) constMetaInfoInterface
metaValueExists(UInt index) constMetaInfoInterface
MZ enum valuePeak2D
NamesOfAnnotationStateBaseFeaturestatic
operator!=(const BaseFeature &rhs) constBaseFeature
OpenMS::RichPeak2D::operator!=(const RichPeak2D &rhs) constRichPeak2Dinline
OpenMS::Peak2D::operator!=(const Peak2D &rhs) constPeak2Dinline
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) constMetaInfoInterface
operator=(const ConsensusFeature &rhs)=defaultConsensusFeature
operator=(ConsensusFeature &&rhs)=defaultConsensusFeature
OpenMS::BaseFeature::operator=(const BaseFeature &rhs)=defaultBaseFeature
OpenMS::BaseFeature::operator=(BaseFeature &&rhs) &=defaultBaseFeature
OpenMS::RichPeak2D::operator=(const RichPeak2D &rhs)=defaultRichPeak2D
OpenMS::RichPeak2D::operator=(RichPeak2D &&rhs) &=defaultRichPeak2D
OpenMS::RichPeak2D::operator=(const Peak2D &rhs)RichPeak2Dinline
OpenMS::Peak2D::operator=(Peak2D &&) noexcept=defaultPeak2D
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs)MetaInfoInterface
OpenMS::MetaInfoInterface::operator=(MetaInfoInterface &&) noexceptMetaInfoInterface
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface const &rhs)=defaultUniqueIdInterface
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface &&) &=defaultUniqueIdInterface
operator==(const BaseFeature &rhs) constBaseFeature
OpenMS::RichPeak2D::operator==(const RichPeak2D &rhs) constRichPeak2Dinline
OpenMS::Peak2D::operator==(const Peak2D &rhs) constPeak2Dinline
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) constMetaInfoInterface
OpenMS::UniqueIdInterface::operator==(UniqueIdInterface const &rhs) constUniqueIdInterfaceinline
Peak2D()=defaultPeak2D
Peak2D(const PositionType &pos, const IntensityType in)Peak2Dinlineexplicit
Peak2D(const Peak2D &p)=defaultPeak2D
Peak2D(Peak2D &&) noexcept=defaultPeak2D
peptides_BaseFeatureprotected
position_Peak2Dprotected
PositionType typedefPeak2D
primary_id_BaseFeatureprotected
quality_BaseFeatureprotected
QualityType typedefBaseFeature
ratios_ConsensusFeatureprivate
rbegin() constConsensusFeature
rbegin()ConsensusFeature
removeMetaValue(const String &name)MetaInfoInterface
removeMetaValue(UInt index)MetaInfoInterface
rend() constConsensusFeature
rend()ConsensusFeature
reverse_iterator typedefConsensusFeature
RichPeak2D()RichPeak2Dinline
RichPeak2D(const RichPeak2D &p)=defaultRichPeak2D
RichPeak2D(const Peak2D &p)RichPeak2Dinlineexplicit
RichPeak2D(const PositionType &pos, const IntensityType in)RichPeak2Dinlineexplicit
RichPeak2D(RichPeak2D &&p)=defaultRichPeak2D
RT enum valuePeak2D
setCharge(const ChargeType &ch)BaseFeature
setFeatures(HandleSetType h)ConsensusFeature
setIntensity(IntensityType intensity)Peak2Dinline
setMetaValue(const String &name, const DataValue &value)MetaInfoInterface
setMetaValue(UInt index, const DataValue &value)MetaInfoInterface
setMZ(CoordinateType coordinate)Peak2Dinline
setPeptideIdentifications(const std::vector< PeptideIdentification > &peptides)BaseFeature
setPosition(const PositionType &position)Peak2Dinline
setPrimaryID(const IdentificationData::IdentifiedMolecule &id)BaseFeature
setQuality(QualityType q)BaseFeature
setRatios(std::vector< Ratio > &rs)ConsensusFeature
setRT(CoordinateType coordinate)Peak2Dinline
setUniqueId()UniqueIdInterface
setUniqueId(UInt64 rhs)UniqueIdInterfaceinline
setUniqueId(const String &rhs)UniqueIdInterface
setWidth(WidthType fwhm)BaseFeature
shortDimensionName(UInt const dim)Peak2Dstatic
shortDimensionNameMZ()Peak2Dstatic
shortDimensionNameRT()Peak2Dstatic
shortDimensionUnit(UInt const dim)Peak2Dstatic
shortDimensionUnitMZ()Peak2Dstatic
shortDimensionUnitRT()Peak2Dstatic
size() constConsensusFeature
SIZE_OF_ANNOTATIONSTATE enum valueBaseFeature
sortPeptideIdentifications()BaseFeature
OpenMS::swap(MetaInfoInterface &rhs)MetaInfoInterface
OpenMS::UniqueIdInterface::swap(UniqueIdInterface &from)UniqueIdInterfaceinline
unique_id_UniqueIdInterfaceprotected
UniqueIdInterface()UniqueIdInterfaceinline
UniqueIdInterface(const UniqueIdInterface &rhs)=defaultUniqueIdInterface
UniqueIdInterface(UniqueIdInterface &&rhs)=defaultUniqueIdInterface
updateIDReferences(const IdentificationData::RefTranslator &trans)BaseFeature
width_BaseFeatureprotected
WidthType typedefBaseFeature
~BaseFeature() overrideBaseFeature
~ConsensusFeature() overrideConsensusFeature
~MetaInfoInterface()MetaInfoInterface
~Peak2D() noexcept=defaultPeak2D
~RichPeak2D() overrideRichPeak2Dinline
~UniqueIdInterface()=defaultUniqueIdInterfacevirtual