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| Modification () |
| Default constructor. More...
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| Modification (const Modification &)=default |
| Copy constructor. More...
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| Modification (Modification &&)=default |
| Move constructor. More...
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| ~Modification () override |
| Destructor. More...
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Modification & | operator= (const Modification &)=default |
| Assignment operator. More...
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Modification & | operator= (Modification &&) &=default |
| Move assignment operator. More...
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bool | operator== (const SampleTreatment &rhs) const override |
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SampleTreatment * | clone () const override |
| clone method. See SampleTreatment More...
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const String & | getReagentName () const |
| returns the name of the reagent that was used (default: "") More...
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void | setReagentName (const String &reagent_name) |
| sets the name of the reagent that was used More...
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double | getMass () const |
| returns the mass change (default: 0.0) More...
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void | setMass (double mass) |
| sets the mass change More...
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const SpecificityType & | getSpecificityType () const |
| returns the specificity of the reagent (default: AA) More...
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void | setSpecificityType (const SpecificityType &specificity_type) |
| sets the specificity of the reagent More...
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const String & | getAffectedAminoAcids () const |
| returns a string containing the one letter code of the amino acids that are affected by the reagent. (default: "") More...
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void | setAffectedAminoAcids (const String &affected_amino_acids) |
| returns a string containing the one letter code of the amino acids that are affected by the reagent. Do not separate them by space, tab or comma! More...
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| SampleTreatment (const String &type) |
| Constructor. More...
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| SampleTreatment (const SampleTreatment &)=default |
| Copy constructor. More...
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| SampleTreatment (SampleTreatment &&)=default |
| Move constructor. More...
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virtual | ~SampleTreatment () |
| Destructor. More...
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SampleTreatment & | operator= (const SampleTreatment &)=default |
| Assignment operator. More...
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SampleTreatment & | operator= (SampleTreatment &&) &=default |
| Move assignment operator. More...
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const String & | getType () const |
| return the treatment type More...
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const String & | getComment () const |
| returns the description of the sample treatment More...
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void | setComment (const String &comment) |
| sets the description of the sample treatment More...
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| MetaInfoInterface () |
| Constructor. More...
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| MetaInfoInterface (const MetaInfoInterface &rhs) |
| Copy constructor. More...
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| MetaInfoInterface (MetaInfoInterface &&) noexcept |
| Move constructor. More...
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| ~MetaInfoInterface () |
| Destructor. More...
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MetaInfoInterface & | operator= (const MetaInfoInterface &rhs) |
| Assignment operator. More...
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MetaInfoInterface & | operator= (MetaInfoInterface &&) noexcept |
| Move assignment operator. More...
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void | swap (MetaInfoInterface &rhs) |
| Swap contents. More...
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bool | operator== (const MetaInfoInterface &rhs) const |
| Equality operator. More...
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bool | operator!= (const MetaInfoInterface &rhs) const |
| Equality operator. More...
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const DataValue & | getMetaValue (const String &name) const |
| Returns the value corresponding to a string, or DataValue::EMPTY if not found. More...
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DataValue | getMetaValue (const String &name, const DataValue &default_value) const |
| Returns the value corresponding to a string, or a default value (e.g.: DataValue::EMPTY) if not found
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const DataValue & | getMetaValue (UInt index) const |
| Returns the value corresponding to the index, or DataValue::EMPTY if not found. More...
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DataValue | getMetaValue (UInt index, const DataValue &default_value) const |
| Returns the value corresponding to the index, or a default value (e.g.: DataValue::EMPTY) if not found
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bool | metaValueExists (const String &name) const |
| Returns whether an entry with the given name exists. More...
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bool | metaValueExists (UInt index) const |
| Returns whether an entry with the given index exists. More...
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void | setMetaValue (const String &name, const DataValue &value) |
| Sets the DataValue corresponding to a name. More...
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void | setMetaValue (UInt index, const DataValue &value) |
| Sets the DataValue corresponding to an index. More...
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void | removeMetaValue (const String &name) |
| Removes the DataValue corresponding to name if it exists. More...
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void | removeMetaValue (UInt index) |
| Removes the DataValue corresponding to index if it exists. More...
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void | addMetaValues (const MetaInfoInterface &from) |
| function to copy all meta values from one object to this one More...
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void | getKeys (std::vector< String > &keys) const |
| Fills the given vector with a list of all keys for which a value is set. More...
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void | getKeys (std::vector< UInt > &keys) const |
| Fills the given vector with a list of all keys for which a value is set. More...
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bool | isMetaEmpty () const |
| Returns if the MetaInfo is empty. More...
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void | clearMetaInfo () |
| Removes all meta values. More...
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