- m -

m : IDBoostGraph::dfs_ccsplit_visitor
m_ : mean_and_stddev
m_2H : RNPxlReportRow
m_3H : RNPxlReportRow
m_4H : RNPxlReportRow
m_data : EGHFitter1D::EGHFitterFunctor , EGHTraceFitter::EGHTraceFunctor , EmgFitter1D::EgmFitterFunctor , GaussTraceFitter::GaussTraceFunctor , OptimizePick::OptPeakFunctor , TwoDOptimization::TwoDOptFunctor
m_features : MockMRMFeature
m_H : RNPxlReportRow
m_ids : SiriusMSFile::CompoundInfo
m_ids_id : SiriusMSFile::CompoundInfo
m_inputs : LevMarqFitter1D::GenericFunctor , OptimizePick::OptPeakFunctor , TraceFitter::GenericFunctor , TwoDOptimization::TwoDOptFunctor
m_intensity : MockFeature , MockMRMFeature
m_intensity_vec : MockFeature
m_library_intensities : MockTransitionGroup
m_meta_data_ : MzTabM
m_native_ids : MockTransitionGroup
m_precursor_features : MockMRMFeature
m_rt : MockFeature , MockMRMFeature
m_rt_vec : MockFeature
m_size : MockTransitionGroup
m_small_molecule_data_ : MzTabM
m_small_molecule_evidence_data_ : MzTabM
m_small_molecule_feature_data_ : MzTabM
m_sn_value : MockSignalToNoise
m_values : LevMarqFitter1D::GenericFunctor , OptimizePick::OptPeakFunctor , TraceFitter::GenericFunctor , TwoDOptimization::TwoDOptFunctor
m_windows_ : TOPPViewMenu
magnetic_field_strength_ : MassAnalyzer
magnetic_fs_ : MassAnalyzerVisualizer
main_score : PeptideHit::PepXMLAnalysisResult
mainlayout_ : BaseVisualizerGUI
major_version_ : MascotXMLHandler
maldi_probabilities_ : IonizationSimulation
manager_ : MascotRemoteQuery , NetworkGetRequest
mandatory_export_columns_ : TableView
manhatt_score_dia : OpenSwath_Scores
map_ : FeatureFinderAlgorithm , FeatureFinderAlgorithmMRM , FeatureFinderAlgorithmPicked , INIUpdater , FeatureXMLHandler , TOPPASResources
map_as_2d_disabled_ : TOPPViewOpenDialog
map_id_run_fileidx_2_msfileidx_ : MzTab::CMMzTabStream , MzTab::IDMzTabStream
map_index : QTCluster::Element
map_index_ : FeatureHandle , GridFeature , KDTreeFeatureMaps
map_label_ : FeatureDeconvolution , MetaboliteFeatureDeconvolution
map_label_inverse_ : FeatureDeconvolution , MetaboliteFeatureDeconvolution
map_multiple_assays_ : MRMMapping
map_points_ : ConvexHull2D
map_precursor_to_chrom_idx_cache_ : SpectraTreeTab
map_to_vec_index_ : IsobaricNormalizer
mapper_ : Area< N_DIM >
mapping : MappingParam
mapping_ : MzMLHandler , SemanticValidator
mapping_rules_ : CVMappings
mapping_tolerance_ : FeatureFinderIdentificationAlgorithm
margin_ : AxisWidget , HistogramWidget , MultiGradientSelector
marker_ions : RNPxlReportRow
markers_ : MarkerMower
mascot_decoy_xml_ : MascotRemoteQuery
mascot_xml_ : MascotRemoteQuery
mass : AccurateMassSearchEngine::MappingEntry_ , FLASHDeconvHelperStructs::LogMzPeak , IMSIsotopeDistribution::Peak
mass2aa_ : Tagger
mass_ : AdductInfo , Compomer , FeatureFinderAlgorithmMetaboIdent::FeatureFinderMetaboIdentCompound , Modification , PepXMLFile::AminoAcidModification , Sample
mass_analyzers_ : Instrument
mass_bin_min_value_ : FLASHDeconvAlgorithm
mass_bins_ : FLASHDeconvAlgorithm
mass_decomp_algorithm_ : CompNovoIdentificationBase
mass_delta : MzIdentMLDOMHandler::ModificationParam
mass_diff_ : ChargePair
mass_error_da : MQExporterHelper::MQCommonOutputs
mass_error_da_ : MassTraceDetection
mass_error_ppm : MQExporterHelper::MQCommonOutputs
mass_error_ppm_ : MassTraceDetection
mass_error_precursor_ppm : SiriusMzTabWriter::SiriusAdapterHit
mass_error_unit_ : AccurateMassSearchEngine
mass_error_value_ : AccurateMassSearchEngine
mass_in_lcms_ : IntegerMassDecomposer< ValueType, DecompositionValueType >
mass_interval_ : FLASHDeconvHelperStructs::PrecalculatedAveragine
mass_mappings_ : AccurateMassSearchEngine
mass_shift_ : Tagging
mass_shift_index_ : MultiplexIsotopicPeakPattern
mass_shifts_ : MultiplexIsotopicPeakPattern
mass_to_charge : MzTabPeptideSectionRow
mass_tolerance_ : ConsensusIDAlgorithmPEPIons
mass_trace_intensities_ : AccurateMassSearchResult
mass_type : DBSearchParam , ProteinIdentification::SearchParameters
mass_type_ : MascotInfile , ProteinIdentificationVisualizer
mass_type_fragment_ : SequestInfile
mass_type_parent_ : SequestInfile
mass_window_width_ : FeatureFinderAlgorithmPicked , IsotopeDistributionCache
massdev_score : OpenSwath_Scores
massdiff_ : PepXMLFile::AminoAcidModification
masses_ : PrecursorIonSelectionPreprocessing
massIDs : AccurateMassSearchEngine::MappingEntry_
match_odds : OPXLDataStructs::CrossLinkSpectrumMatch
match_odds_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
match_odds_beta : OPXLDataStructs::CrossLinkSpectrumMatch
match_peak_allowed_error_ : SequestInfile
match_peak_count_ : SequestInfile
match_peak_tolerance_ : SequestInfile
matched_b_ions : HyperScore::PSMDetail
matched_linear_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
matched_linear_beta : OPXLDataStructs::CrossLinkSpectrumMatch
matched_whitelist_ : FuzzyStringComparator
matched_xlink_alpha : OPXLDataStructs::CrossLinkSpectrumMatch
matched_xlink_beta : OPXLDataStructs::CrossLinkSpectrumMatch
matched_y_ions : HyperScore::PSMDetail
matches : MorpheusScore::Result
matching_hmdb_ids_ : AccurateMassSearchResult
matching_index_ : AccurateMassSearchResult
matching_peaks : TwoDOptimization::Data
matching_peaks_ : TwoDOptimization
matching_score_ : SpectralMatch
matching_spectrum_idx_ : SpectralMatch
matrix_ : DistanceMatrix< Value >
max : FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern , SummaryStatistics< T > , PeakPickerCWT::PeakArea_
max_ : AxisWidget , BiGaussModel , DBoundingBox< D > , DRange< D > , EGHModel , EmgModel , GaussModel , InIntensityRange< PeakType > , InMzRange< PeakType > , InRTRange< SpectrumType > , DIntervalBase< D > , Histogram< ValueType, BinSizeType > , RangeBase , RangeStats< VALUE_TYPE >
max_AA_per_mod_per_peptide_ : SequestInfile
max_aaa_ : ACTrie
max_aaa_leftover : ACSpawn
max_abs_charge_ : FLASHDeconvAlgorithm , PeakGroup
max_adduct_charge_ : IonizationSimulation
max_bias_ : AbsoluteQuantitation
max_charge : FLASHDeconvHelperStructs::MassFeature
max_charge_ : FeatureFinderAlgorithmIsotopeWavelet , IsotopeWavelet , IsotopeWaveletTransform< PeakType > , Tagger
max_cleavages_ : IDFilter::PeptideDigestionFilter
max_code_length_ : RibonucleotideDB
max_correctly_ : PosteriorErrorProbabilityModel
max_decomp_weight_ : CompNovoIdentificationBase
max_diff_mz_ : QTClusterFinder
max_diff_ppm : FeatureDistance::DistanceParams_
max_diff_rt_ : QTClusterFinder
max_difference : FeatureDistance::DistanceParams_
max_distance_ : QTCluster::BulkData
max_energy_ : IsInCollisionEnergyRange< SpectrumType >
max_entries_ : RecentFilesMenu
max_feature_intersection_ : FeatureFinderAlgorithmPicked
max_float : Param::ParamEntry , ParameterInformation
max_fragment_mz_ : TargetedSpectraExtractor
max_fwhm_ : ElutionPeakDetection
max_gap_ : Tagger
max_gd_iter_ : EmgGradientDescent
max_incorrectly_ : PosteriorErrorProbabilityModel
max_int : Param::ParamEntry , ParameterInformation
max_intensity : IDDecoyProbability::Transformation_ , LayerDataDefs::ProjectionData::Summary
max_intensity_ : FeatureDistance , SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
max_intensity_bin : IDDecoyProbability::Transformation_
max_internal_cleavage_sites_ : SequestInfile
max_isotope_ : CoarseIsotopePatternGenerator , CompNovoIdentificationBase , ExtendedIsotopeFitter1D , ExtendedIsotopeModel , IsotopeFitter1D , IsotopeModel , SimpleTSGXLMS , TheoreticalSpectrumGenerator , TheoreticalSpectrumGeneratorXLMS
max_isotope_index_ : FLASHDeconvHelperStructs::PrecalculatedAveragine
max_isotope_probability_ : TheoreticalSpectrumGenerator
max_iteration_ : LevMarqFitter1D , OptimizePick , PrecursorIonSelection , TwoDOptimization
max_iterations_ : TraceFitter
max_iters_ : AbsoluteQuantitation
max_length : DBSearchParam
max_length_ : LogWindow
max_line_width_ : IndentedStream
max_lines_ : IndentedStream
max_mass_ : FLASHDeconvAlgorithm
max_missing_trace_peaks_ : FeatureFinderAlgorithmPicked
max_mm_ : ACTrie
max_mm_leftover : ACSpawn
max_mods_per_peptide_ : ModificationDefinitionsSet , SequestInfile
max_mz_ : CompNovoIdentificationBase , FLASHDeconvAlgorithm
max_mz_cutoff_ : IsotopeWaveletTransform< PeakType >
max_neutrals_ : MassExplainer
max_num_peaks_considered_ : MapAlignmentAlgorithmPoseClustering
max_num_peaks_per_pattern_ : IsotopeWaveletTransform< PeakType >
max_number_aa_per_decomp_ : CompNovoIdentificationBase
max_number_pivot_ : CompNovoIdentificationBase
max_occurrences_ : ModificationDefinition
max_pairwise_log_fc_ : MapAlignmentAlgorithmKD
max_peak : FeatureFinderAlgorithmPickedHelperStructs::MassTrace
max_peak_distance_ : TwoDOptimization
max_pep_lens_ : SequestOutfile
max_peptide_length_ : AScore
max_permutations_ : AScore
max_precursor_charge_ : XQuestResultXMLHandler , OpenPepXLAlgorithm , OpenPepXLLFAlgorithm , XTandemInfile
max_precursor_isotope_deviation_ : IsobaricChannelExtractor
max_precursor_mass_threashold_ : TargetedSpectraExtractor
max_prefix_loss_leftover : ACSpawn
max_rt : ConfidenceScoring::RTNorm_ , FeatureFinderAlgorithmPickedHelperStructs::MassTrace
max_rt_ : FLASHDeconvAlgorithm
max_rt_span_ : FeatureFinderAlgorithmPicked
max_scan_size_ : IsotopeWaveletTransform< PeakType >
max_score : IDDecoyProbability::Transformation_
max_score_ : XQuestResultXMLHandler , PrecursorIonSelection , XFDRAlgorithm , XQuestResultXMLFile
max_series_ : SpectrumAnnotator
max_size_ : NucleicAcidSearchEngine::HasInvalidLength , IsInIsolationWindowSizeRange< SpectrumType >
max_snr_abs_charge_ : PeakGroup
max_span_ : MassExplainer
max_subscore_number_ : CompNovoIdentificationBase
max_tag_length_ : Tagger
MAX_TIME : LogStreamBuf
max_trace : FeatureFinderAlgorithmPickedHelperStructs::MassTraces
max_trace_length_ : MassTraceDetection
max_valid_evalue_ : XTandemInfile
max_variable_mods_per_peptide_ : OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
maximal_data_pool_size_ : PeakFileOptions
maximal_mz_measurement_limit_ : IonizationSimulation
maxptmsize_ : InspectInfile
mc_result_ : MissedCleavages
MDF_ALL : SpectrumMetaDataLookup
MDF_MSLEVEL : SpectrumMetaDataLookup
MDF_NATIVEID : SpectrumMetaDataLookup
MDF_PRECURSORCHARGE : SpectrumMetaDataLookup
MDF_PRECURSORMZ : SpectrumMetaDataLookup
MDF_PRECURSORRT : SpectrumMetaDataLookup
MDF_RT : SpectrumMetaDataLookup
MDF_SCANNUMBER : SpectrumMetaDataLookup
me_ : IsotopeWavelet
mean : SummaryStatistics< T > , SignalToNoiseEstimator< Container >::GaussianEstimate
mean_ : IsotopeModel , AsymmetricStatistics< RealT > , BasicStatistics< RealT >
mean_error : HyperScore::PSMDetail , SimpleSearchEngineAlgorithm::AnnotatedHit_
mean_residuals_ : LinearRegression
measure_ : IDMapper
measurement_start_ : Plot2DCanvas , PlotCanvas
measurement_start_point_px_ : Plot1DCanvas
median : SummaryStatistics< T >
median_absolute_mass_error_fragment_peaks_ppm : SiriusMzTabWriter::SiriusAdapterHit
median_mass_error_fragment_peaks_ppm : SiriusMzTabWriter::SiriusAdapterHit
medium_channel_arginine_label_ : SILACLabeler
MEDIUM_CHANNEL_ID_ : O18Labeler
medium_channel_label_ : ICPLLabeler
medium_channel_lysine_label_ : SILACLabeler
MEDIUM_FEATURE_MAPID_ : ICPLLabeler , SILACLabeler
mem_after : SysInfo::MemUsage
mem_after_peak : SysInfo::MemUsage
mem_before : SysInfo::MemUsage
mem_before_peak : SysInfo::MemUsage
menu_ : TOPPViewBase
menu_items_ : TOPPViewMenu
merge_spectra_ : MetaboliteSpectralMatching
message_label_ : TOPPASBase , TOPPViewBase
message_level : LPWrapper::SolverParam
meta : MzMLHandlerHelper::BinaryData , SimProtein
meta_ : MetaInfoInterface
meta_data_ : MzTab::CMMzTabStream , MzTab::IDMzTabStream , MzTab
meta_id_descs_ : MzDataHandler
meta_indices_ : DataFilters
meta_ms_experiment_ : CachedmzML , OnDiscMSExperiment
meta_name : DataFilters::DataFilter
meta_value_qc : MRMFeatureQC::ComponentGroupQCs , MRMFeatureQC::ComponentQCs
metabuttons_ : MetaInfoVisualizer
metadata_ : SpectrumMetaDataLookup
metadata_only_ : FeatureFileOptions , PeakFileOptions
metainfodescription_name_ : MetaInfoDescriptionVisualizer
metainfoptr_ : MetaInfoVisualizer
metalabels_ : MetaInfoVisualizer
metavalue_key_ : HasMetaValue< MetaContainer >
methionine_cleavage_ : IDFilter::DigestionFilter
method_ : Normalizer , PeakPickerMRM
method_of_combination_ : AcquisitionInfo
methods_ : HasActivationMethod< SpectrumType >
metric_ : GridBasedClustering< Metric >
mi_contrast_matrix_ : MRMScoring
mi_matrix_ : MRMScoring
mi_precursor_combined_matrix_ : MRMScoring
mi_precursor_contrast_matrix_ : MRMScoring
mi_precursor_matrix_ : MRMScoring
mi_score : OpenSwath_Scores
MIC : MorpheusScore::Result
min : SummaryStatistics< T >
min_ : AxisWidget , BiGaussModel , DBoundingBox< D > , DRange< D > , EGHModel , EmgModel , GaussModel , InIntensityRange< PeakType > , InMzRange< PeakType > , InRTRange< SpectrumType > , DIntervalBase< D > , Histogram< ValueType, BinSizeType > , RangeBase , RangeStats< VALUE_TYPE >
min_aa_weight_ : CompNovoIdentificationBase
min_abs_charge_ : FLASHDeconvAlgorithm , PeakGroup
min_charge : FLASHDeconvHelperStructs::MassFeature
min_charge_ : Tagger
min_cleavages_ : IDFilter::PeptideDigestionFilter
min_correlation_coefficient_ : AbsoluteQuantitation
min_detect_ : DetectabilitySimulation
min_element_ : DistanceMatrix< Value >
min_energy_ : IsInCollisionEnergyRange< SpectrumType >
min_float : Param::ParamEntry , ParameterInformation
min_fragment_mz_ : TargetedSpectraExtractor
min_fwhm_ : ElutionPeakDetection
min_gap_ : Tagger
min_int : Param::ParamEntry , ParameterInformation
min_iso_size_ : FLASHDeconvAlgorithm
min_isotope_cosine_ : FLASHDeconvAlgorithm , MassFeatureTrace
min_isotope_fit_ : FeatureFinderAlgorithmPicked
min_length : DBSearchParam
min_mass_ : FLASHDeconvAlgorithm , FLASHDeconvHelperStructs::PrecalculatedAveragine
min_match_score_ : TargetedSpectraExtractor
MIN_MZ_ : BinnedSpectrum
min_mz_ : CompNovoIdentificationBase , FLASHDeconvAlgorithm
min_negative_isotope_index_ : PeakGroup
min_nr_diffs_per_bin_ : QTClusterFinder
min_peak_width_ : FeatureFinderAlgorithmMetaboIdent , FeatureFinderIdentificationAlgorithm , MRMTransitionGroupPicker
min_pep_ids_ : PrecursorIonSelection
min_points_ : AbsoluteQuantitation
min_precursor_charge_ : XQuestResultXMLHandler , OpenPepXLAlgorithm , OpenPepXLLFAlgorithm
min_precursor_intensity_ : IsobaricChannelExtractor
min_precursor_purity_ : IsobaricChannelExtractor
min_prob_ : IsotopePatternGenerator
min_qual_ : MRMTransitionGroupPicker
min_reporter_intensity_ : IsobaricChannelExtractor
min_required_elements_ : SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
min_rt : ConfidenceScoring::RTNorm_
min_rt_ : FLASHDeconvAlgorithm
min_rt_span_ : FeatureFinderAlgorithmPicked
min_run_occur_ : MapAlignmentAlgorithmIdentification
min_sample_rate_ : MassTraceDetection
min_score : IDDecoyProbability::Transformation_
min_score_ : XQuestResultXMLHandler , MapAlignmentAlgorithmIdentification , QTClusterFinder , XFDRAlgorithm , XQuestResultXMLFile
min_select_score_ : TargetedSpectraExtractor
min_shared_ : ConsensusIDAlgorithmPEPIons
min_size_ : NucleicAcidSearchEngine::HasInvalidLength , IsInIsolationWindowSizeRange< SpectrumType >
min_spacing_ : IsotopeWaveletTransform< PeakType >
min_spectra_ : FeatureFinderAlgorithmPicked
min_support_ : ConsensusIDAlgorithm
min_support_peak_count_ : FLASHDeconvAlgorithm
min_tag_length_ : Tagger
min_trace_length_ : MassTraceDetection
min_trace_score_ : FeatureFinderAlgorithmPicked
min_upper_edge_dist : ChromExtractParams
minimal_mz_measurement_limit_ : IonizationSimulation
minimal_protein_list_accessions_ : PSProteinInference
minor_version_ : MascotXMLHandler
mip_gap : LPWrapper::SolverParam
mirror_mode_ : Plot1DCanvas
mismatchscore_ : MapAlignmentAlgorithmSpectrumAlignment
missed_cleavages : DBSearchParam , ProteinIdentification::SearchParameters
missed_cleavages_ : EnzymaticDigestion , MascotInfile , MultiplexDeltaMassesGenerator , OpenPepXLAlgorithm , OpenPepXLLFAlgorithm , ProteinIdentificationVisualizer
missed_cleavages_mean : IdentificationSummary::Result
missing_ : PeakPickerHiRes , PeakPickerMaxima
missing_decoy_action_ : PeptideIndexing
mixture_ : MSstatsFile::MSstatsTMTLine_
ml1_ : AcqusHandler
ml1s_ : TOFCalibration
ml2_ : AcqusHandler
ml2s_ : TOFCalibration
ml3_ : AcqusHandler
ml3s_ : TOFCalibration
mm_max_ : PeptideIndexing
mod_ : ModificationDefinition
mod_combinations : RNPxlModificationMassesResult
mod_def_set_ : OMSSAXMLFile , XTandemXMLFile
mod_group_map_ : MascotGenericFile
mod_identifier_ : MzTabModification
mod_masses : RNPxlModificationMassesResult
mod_tol_ : PepXMLFile
mode_ : HasScanMode< SpectrumType >
model_ : Instrument , InstrumentVisualizer , PSLPFormulation , SimpleSVM , SVMWrapper , TransformationDescription , TransformationModelLowess
model_data_ : EnzymaticDigestionLogModel
model_param_ : MapAlignmentAlgorithmTreeGuided
model_type_ : MapAlignmentAlgorithmTreeGuided , TransformationDescription , TransformationXMLFile
modifiable : LayerDataBase
modification : MzTabModificationMetaData
modification_ : UnimodXMLHandler , Residue
modification_names_ : ModificationsDB
modification_param_cvs : MzIdentMLDOMHandler::ModificationParam
modification_parameter : MzIdentMLDOMHandler::SpectrumIdentificationProtocol
modificationAA_ : ModificationVisualizer , TaggingVisualizer
modificationmass_ : ModificationVisualizer , TaggingVisualizer
modificationname_ : ModificationVisualizer , TaggingVisualizer
modifications : MQExporterHelper::MQCommonOutputs , MzTabNucleicAcidSectionRow , MzTabOligonucleotideSectionRow , MzTabOSMSectionRow , MzTabPeptideSectionRow , MzTabProteinSectionRow , MzTabPSMSectionRow , MzTabSmallMoleculeSectionRow , LightCompound , Peptide
modifications_ : UnimodXMLHandler , OMSSAXMLFile , ProteinHit , XTandemInfile
modifications_fixed_ : SimpleSearchEngineAlgorithm
modifications_max_variable_mods_per_peptide_ : SimpleSearchEngineAlgorithm
modifications_per_peptide_ : InspectInfile
modifications_variable_ : SimpleSearchEngineAlgorithm
modificationspecificity_ : ModificationVisualizer , TaggingVisualizer
modified : LayerDataBase
modified_ : ParamEditor
modified_peptides_ : MascotXMLHandler
modify_strings_ : SVOutStream
mods : Peptide
mods_ : MascotInfile , ModificationsDB , MSQuantifications::Assay , PepNovoInfile
mods_and_keys_ : PepNovoInfile
mods_map_ : OMSSAXMLFile
mods_to_num_ : OMSSAXMLFile
mol_multiplier_ : AdductInfo
molecular_formula : CsiFingerIdMzTabWriter::CsiAdapterHit , MetaboTargetedAssay , Compound
molecule_type : DBSearchParam , ParentSequence
mono_mass_ : UnimodXMLHandler , ResidueModification , Ribonucleotide
mono_mass_delta : Peptide::Modification
mono_weight_ : Element , Residue
monoisotopic_mass_ : PeakGroup
monoisotopic_mz_ : ExtendedIsotopeFitter1D , ExtendedIsotopeModel , IsotopeModel
months : XQuestResultXMLHandler
mouse_move_begin_ : Plot3DOpenGLCanvas
mouse_move_end_ : Plot3DOpenGLCanvas
moving_annotations_ : Plot1DCanvas
moving_splitter_ : HistogramWidget
mp_ : SvmTheoreticalSpectrumGenerator
mrm_features_ : MRMTransitionGroup< ChromatogramType, TransitionType >
mrmfeature_ : MRMFeatureOpenMS
ms1 : SwathMap
ms1_consumer_ : CachedSwathFileConsumer , MzMLSwathFileConsumer
ms1_im_ : SwathMapMassCorrection
ms1_isotope_correlation : OpenSwath_Scores
ms1_isotope_overlap : OpenSwath_Scores
ms1_map_ : FullSwathFileConsumer , MRMFeatureFinderScoring , OpenSwathWorkflowBase
ms1_mi_combined_score : OpenSwath_Scores
ms1_mi_contrast_score : OpenSwath_Scores
ms1_mi_score : OpenSwath_Scores
ms1_ppm_score : OpenSwath_Scores
ms1_spectra_seen_ : SwathQC
ms1_xcorr_coelution_combined_score : OpenSwath_Scores
ms1_xcorr_coelution_contrast_score : OpenSwath_Scores
ms1_xcorr_coelution_score : OpenSwath_Scores
ms1_xcorr_shape_combined_score : OpenSwath_Scores
ms1_xcorr_shape_contrast_score : OpenSwath_Scores
ms1_xcorr_shape_score : OpenSwath_Scores
ms2_included_ : Ms2SpectrumStats
ms2_presence : Ms2SpectrumStats::ScanEvent
ms_data_ : FeatureFinderAlgorithmMetaboIdent , FeatureFinderIdentificationAlgorithm
ms_experiment_ : SpectrumAccessOpenMS
ms_level : SpectrumMeta , InternalCalibration::LockMass , MzTabMSmallMoleculeEvidenceSectionRow , SpectrumMetaDataLookup::SpectrumMetaData , OSSpectrumMeta
ms_level_ : FLASHDeconvAlgorithm , AreaIterator< ValueT, ReferenceT, PointerT, SpectrumIteratorT, PeakIteratorT >::Param , MSSpectrum
ms_levels_ : MSExperiment , PeakFileOptions , PeakPickerHiRes
ms_run : MzTabMetaData , MzTabMMetaData
ms_run_ : MzTabSpectraRef
ms_run_path_ : XQuestResultXMLHandler
ms_run_ref : MzTabAssayMetaData , MzTabMAssayMetaData
ms_runs_ : MzTab::CMMzTabStream , MzTab::IDMzTabStream
msd_group : ProteinResolver::PeptideEntry , ProteinResolver::ProteinEntry
msd_groups : ProteinResolver::ISDGroup
msds : ProteinResolver::ResolverResult
msfile_section_ : ExperimentalDesign
msgf_id_ : DigestionEnzymeProtein
msms_mz : MQExporterHelper::MQCommonOutputs
msp_ : MSPGenericFile_friend
msq_ : MzQuantMLHandler
mt : FLASHDeconvHelperStructs::MassFeature
mt_snr_filtering_ : ElutionPeakDetection
mtx_ : File::TemporaryFiles_
mu_ : PrecursorIonSelectionPreprocessing
multicharge_ : InspectInfile
mw_ : HistogramDialog
my_matrix_ : NeedlemanWunsch
mz : ChromatogramExtractorAlgorithm::ExtractionCoordinates , CsiFingerIdMzTabWriter::CsiAdapterIdentification , FeatureFinderAlgorithmIsotopeWavelet::BoxElement , FLASHDeconvHelperStructs::LogMzPeak , Observation , RNPxlFragmentAnnotationHelper::FragmentAnnotationDetail_ , InternalCalibration::LockMass , IsotopeWaveletTransform< PeakType >::BoxElement , PeakCandidate , PeptideHit::PeakAnnotation , SimpleTSGXLMS::SimplePeak , SiriusMzTabWriter::SiriusAdapterIdentification
MZ_ : InclusionExclusionList::IEWindow
mz_ : MascotInfile , MultiplexFilteredPeak , MultiplexSatelliteProfile , PeptideIdentification , PepXMLFile , PrecursorVisualizer , Product , TraMLProduct
mz_32_bit_ : PeakFileOptions
mz_as_ppm_ : InclusionExclusionList::WindowDistance_
MZ_AXIS_TITLE : PlotWidget
MZ_begin : IsotopeWaveletTransform< PeakType >::BoxElement
mz_bin_min_value_ : FLASHDeconvAlgorithm
mz_bins_ : FLASHDeconvAlgorithm
mz_correction_function_ : SwathMapMassCorrection
MZ_end : IsotopeWaveletTransform< PeakType >::BoxElement
mz_error_mean_ : RawMSSignalSimulation
mz_error_ppm_ : AccurateMassSearchResult
mz_error_stddev_ : RawMSSignalSimulation
mz_error_unit_ : MetaboliteSpectralMatching
mz_extraction_window : ChromExtractParams
mz_extraction_window_ : SwathMapMassCorrection
mz_extraction_window_ppm_ : SwathMapMassCorrection
mz_heavy_ : XQuestResultXMLHandler
mz_idx_ : MultiplexFilteredPeak , MultiplexSatelliteCentroided
mz_left_ : InPrecursorMZRange< SpectrumType >
mz_light_ : XQuestResultXMLHandler
mz_max : FeatureFinderAlgorithmMetaboIdent::MassTraceBounds , PeakPickerHiRes::PeakBoundary , PeakPickerMaxima::PeakCandidate
mz_max_ : InclusionExclusionList::WindowDistance_ , PeakWidthEstimator , SpectraMerger::SpectraDistance_
mz_min : FeatureFinderAlgorithmMetaboIdent::MassTraceBounds , PeakPickerHiRes::PeakBoundary
mz_min_ : PeakWidthEstimator
mz_model : Summary
mz_position : PeakShape
mz_ppm_ : FeatureGroupingAlgorithmKD , MapAlignmentAlgorithmKD
mz_precursor : ChromatogramExtractorAlgorithm::ExtractionCoordinates
mz_range_ : FeatureFileOptions , PeakFileOptions
mz_raw_ : MzCalibration
mz_ref_ : MzCalibration
mz_right_ : InPrecursorMZRange< SpectrumType >
mz_score : FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
mz_shifts_ : MultiplexIsotopicPeakPattern
mz_start : SignalToNoiseEstimatorMedianRapid::NoiseEstimator
mz_stdev : Summary
mz_tab_id : MzTabMetaData , MzTabMMetaData
mz_tab_mode : MzTabMetaData
mz_tab_type : MzTabMetaData
mz_tab_version : MzTabMetaData , MzTabMMetaData
mz_tol_ : FeatureGroupingAlgorithmKD , MapAlignmentAlgorithmKD
mz_tolerance_ : IDMapper , MultiplexFiltering , PrecursorIonSelection , TargetedSpectraExtractor
mz_tolerance_unit_ : PrecursorIonSelection
mz_tolerance_unit_in_ppm_ : MultiplexFiltering
mz_unit_is_Da_ : TargetedSpectraExtractor
mz_window_ : FeatureFinderAlgorithmMetaboIdent , FeatureFinderIdentificationAlgorithm
mz_window_ppm_ : FeatureFinderAlgorithmMetaboIdent , FeatureFinderIdentificationAlgorithm
mzid_parser_ : MzIdentMLDOMHandler
mzs_ : FIAMSDataProcessor