- b -
- back()
: BALL::PDBRecords
- back_pressed()
: BALL::VIEW::PeptideDialog
- BackTrackingState_()
: BALL::FPTBondOrderStrategy::BackTrackingState_
- backTransformPrediction()
: BALL::QSAR::Model
- backupTrainingResults()
: BALL::QSAR::RegressionValidation
- backward()
: BALL::DiagonalIteratorTraits< valuetype, mtraits >
, BALL::Composite::ChildCompositeIteratorTraits
, BALL::ElementColumnIteratorTraits< valuetype, mtraits >
, BALL::Composite::CompositeIteratorTraits
, BALL::ElementRowIteratorTraits< valuetype, mtraits >
, BALL::Atom::BondIteratorTraits
, BALL::RowIteratorTraits< valuetype, mtraits >
, BALL::Atom::BondIteratorTraits
, BALL::VectorIteratorTraits< valuetype >
, BALL::CompositeIteratorTraits
, BALL::VIEW::SnapshotVisualisationDialog
, BALL::ColumnIteratorTraits< valuetype, mtraits >
- backwardSelection()
: BALL::QSAR::FeatureSelection
- BagContentWriter()
: BALL::TreeWidth< UndirectedGraph >::BagContentWriter
- BalabanIndexJ()
: BALL::BalabanIndexJ
- balanceParameterChanged_()
: BALL::VIEW::AssignBondOrderConfigurationDialog
- BalducciPearlmanAlgorithm_()
: BALL::RingPerceptionProcessor
- BalducciPearlmanRingSelector_()
: BALL::RingPerceptionProcessor
- BALL_CREATE()
: BALL::PositiveVdWSurface
, BALL::BuildBondsProcessor
, BALL::ConnectedComponentsProcessor
, BALL::HBondProcessor
, BALL::HybridisationProcessor
, BALL::SideChainPlacementProcessor
- ballAndStickDashedBondsEnabled()
: BALL::VIEW::ModelSettingsDialog
- ballStickCylinderRadiusChanged()
: BALL::VIEW::ModelSettingsDialog
- ballStickSphereRadiusChanged()
: BALL::VIEW::ModelSettingsDialog
- BALLThread()
: BALL::VIEW::BALLThread
- BALLToBMRBMapper()
: BALL::NMRStarFile::BALLToBMRBMapper
- BALLVIEW_STATIC_ASSERT_TYPE_IS_INT_OR_FLOAT()
: BALL::VIEW::RenderWindow< taPixelDatatype >
- BALLViewServer()
: BALL::VIEW::ServerWidget::BALLViewServer
- BaseFilterIterator()
: BALL::BaseFilterIterator< Predicate, IteratorBase >
- BaseIterator()
: BALL::BaseIterator< Container, DataType, Position, Traits >
- baseName()
: BALL::FileSystem
- BasicHelper()
: BALL::SimpleDownloaderHelper::BasicHelper
- BayesModel()
: BALL::QSAR::BayesModel
- before()
: BALL::String
- begin()
: BALL::Enumerator< Container, SiteIterator, Variant >
, BALL::ConstForwardIterator< Container, DataType, Position, Traits >
, BALL::ForwardIterator< Container, DataType, Position, Traits >
, BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
, BALL::RandomAccessIterator< Container, DataType, Position, Traits >
, BALL::HashSet< Key >
, BALL::TRegularData1D< ValueType >
, BALL::TRegularData2D< ValueType >
, BALL::TRegularData3D< ValueType >
, BALL::PDBRecords
, BALL::ResourceEntry
, BALL::ResourceFile
, BALL::ExpressionParser::SyntaxTree
, BALL::ConnectedToPredicate::CTPNode
, BALL::ConstBidirectionalFilterIterator< Predicate, IteratorBidirectional >
, BALL::BidirectionalFilterIterator< Predicate, IteratorBidirectional >
, BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
, BALL::BidirectionalIterator< Container, DataType, Position, Traits >
, BALL::ConstForwardFilterIterator< Predicate, IteratorForward >
, BALL::ForwardFilterIterator< Predicate, IteratorForward >
, BALL::ConstForwardIterator< Container, DataType, Position, Traits >
, BALL::ForwardIterator< Container, DataType, Position, Traits >
, BALL::ConstRandomAccessFilterIterator< Predicate, IteratorRandomAccess >
, BALL::RandomAccessFilterIterator< Predicate, IteratorRandomAccess >
, BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
, BALL::RandomAccessIterator< Container, DataType, Position, Traits >
, BALL::ConstReverseIterator< Container, DataType, Position, Traits >
, BALL::ReverseIterator< Container, DataType, Position, Traits >
, BALL::AtomVector
, BALL::Gradient
, BALL::FPTBondOrderStrategy::DPTable_
, BALL::ResidueRotamerSet
, BALL::NodeItem< Node, Edge >
, BALL::SmartsParser::SPNode
, BALL::VIEW::CompositeManager
, BALL::VIEW::RepresentationManager
, BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
, BALL::BidirectionalIterator< Container, DataType, Position, Traits >
- beginAncestor()
: BALL::Composite
- beginBond()
: BALL::Atom
- beginBox()
: BALL::HashGridBox3< Item >
, BALL::HashGrid3< Item >
- beginChildComposite()
: BALL::Composite
- beginComposite()
: BALL::Composite
- beginContactFace()
: BALL::SolventExcludedSurface
- beginData()
: BALL::HashGridBox3< Item >
- beginEdge()
: BALL::GraphFace< Vertex, Edge, Face >
, BALL::GraphVertex< Vertex, Edge, Face >
, BALL::TSimpleMolecularGraph< Node, Edge >
, BALL::SolventExcludedSurface
, BALL::TriangulatedSurface
- beginEdit()
: BALL::VIEW::ColorTable
- beginEntry()
: BALL::QSAR::Registry
- beginFace()
: BALL::GraphVertex< Vertex, Edge, Face >
- beginNamedProperty()
: BALL::PropertyManager
- beginNode()
: BALL::TSimpleMolecularGraph< Node, Edge >
- beginOrientation()
: BALL::SASFace
- beginPoint()
: BALL::TriangulatedSurface
- beginSingularEdge()
: BALL::SolventExcludedSurface
- beginSphericFace()
: BALL::SolventExcludedSurface
- beginToricFace()
: BALL::SolventExcludedSurface
- beginTriangle()
: BALL::TriangulatedSurface
- beginVertex()
: BALL::GraphFace< Vertex, Edge, Face >
, BALL::SolventExcludedSurface
- Bend()
: BALL::MMFF94StretchBend::Bend
- BendComponent()
: BALL::BendComponent
- bestEntry()
: BALL::FPTBondOrderStrategy::DPTable_
- bestPenalty()
: BALL::FPTBondOrderStrategy::DPTable_
- BidirectionalFilterIterator()
: BALL::BidirectionalFilterIterator< Predicate, IteratorBidirectional >
- BidirectionalIterator()
: BALL::BidirectionalIterator< Container, DataType, Position, Traits >
- BinaryFileAdaptor()
: BALL::BinaryFileAdaptor< T >
- BinaryProcessor()
: BALL::BinaryProcessor< T1, T2 >
- binaryProjectsEnabled()
: BALL::VIEW::OpenSavePreferences
- binaryRead()
: BALL::TRegularData1D< ValueType >
, BALL::VIEW::Mesh
, BALL::TRegularData2D< ValueType >
, BALL::TRegularData3D< ValueType >
, BALL::Spectrum< DataT, PeakT, PositionT >
- binaryWrite()
: BALL::TRegularData1D< ValueType >
, BALL::TRegularData2D< ValueType >
, BALL::TRegularData3D< ValueType >
, BALL::Spectrum< DataT, PeakT, PositionT >
, BALL::VIEW::RaytraceableGrid
, BALL::VIEW::Mesh
- binaryWriteRaw()
: BALL::TRegularData3D< ValueType >
- bind()
: BALL::Substring
- BindingPocketProcessor()
: BALL::BindingPocketProcessor
- Bit()
: BALL::Bit
- BitVector()
: BALL::BitVector
- bitwiseAnd()
: BALL::BitVector
- bitwiseOr()
: BALL::BitVector
- bitwiseXor()
: BALL::BitVector
- block_()
: BALL::BitVector
- blowUp()
: BALL::TriangulatedSurface
- Bond()
: BALL::Bond
- BondData()
: BALL::MMFF94StretchParameters::BondData
- bondIndexFor()
: BALL::FPTBondOrderStrategy::DPBackTracking_
- BondIteratorTraits()
: BALL::Atom::BondIteratorTraits
- BondOrderAssignment()
: BALL::BondOrderAssignment
- BondOrderAssignmentStrategy()
: BALL::BondOrderAssignmentStrategy
- bondOrderMatch_()
: BALL::ConnectedToPredicate
- BondPolarizabilities()
: BALL::BondPolarizabilities
- bondProperties()
: BALL::VIEW::MolecularControl
- BondProperties()
: BALL::VIEW::BondProperties
- bondSelected()
: BALL::VIEW::BondProperties
- BookKeeping()
: BALL::PDB::BookKeeping
- BoolEditorWidget()
: BALL::VIEW::BoolEditorWidget
- bootstrap()
: BALL::QSAR::RegressionValidation
, BALL::QSAR::ClassificationValidation
, BALL::QSAR::Validation
- bootstrap1()
: BALL::QSAR::RegressionValidation
- bound_()
: BALL::LogStream
- Box()
: BALL::VIEW::Box
- BoxIteratorTraits()
: BALL::HashGrid3< Item >::BoxIteratorTraits
, BALL::HashGridBox3< Item >::BoxIteratorTraits
, BALL::HashGrid3< Item >::BoxIteratorTraits
, BALL::HashGridBox3< Item >::BoxIteratorTraits
- branch_()
: BALL::TreeWidthImplementation< EditableGraph >::TreeDecompositionBuilder< OriginalGraphType >
- branchAndBound()
: BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >
- BranchAndBoundBondOrderStrategy()
: BALL::BranchAndBoundBondOrderStrategy
- branchState()
: BALL::FPTBondOrderStrategy::DPBackTracking_
- browseChargesData()
: BALL::VIEW::DockDialog
, BALL::VIEW::FDPBDialog
- browseChargesRules()
: BALL::VIEW::DockDialog
, BALL::VIEW::FDPBDialog
- browseExportFile_()
: BALL::VIEW::ShortcutDialog
- browseFiles()
: BALL::VIEW::ExportGeometryDialog
- browseImportFile_()
: BALL::VIEW::ShortcutDialog
- browseParameterFiles()
: BALL::VIEW::CharmmConfigurationDialog
, BALL::VIEW::MMFF94ConfigurationDialog
, BALL::VIEW::AmberConfigurationDialog
- browseParameterFiles_()
: BALL::VIEW::AssignBondOrderConfigurationDialog
- browseRadiiData()
: BALL::VIEW::FDPBDialog
, BALL::VIEW::DockDialog
- browseRadiiRules()
: BALL::VIEW::DockDialog
, BALL::VIEW::FDPBDialog
- Bruker1DFile()
: BALL::Bruker1DFile
- Bruker2DFile()
: BALL::Bruker2DFile
- BufferedRenderer()
: BALL::VIEW::BufferedRenderer
- bufferingDependentRender_()
: BALL::VIEW::GLRenderer
- BufferOverflow()
: BALL::Exception::BufferOverflow
- bufferRepresentation()
: BALL::VIEW::RenderSetup
, BALL::VIEW::Renderer
, BALL::VIEW::TilingRenderer
, BALL::VIEW::GLRenderer
- bufferTrajectory()
: BALL::VIEW::TrajectoryController
- buildAll_()
: BALL::MOL2File
- buildAmbiguousTriangles()
: BALL::SESTriangulator
- buildASU_()
: BALL::CrystalGenerator
- buildBitset()
: BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >
- buildBondModels_()
: BALL::VIEW::AtomBondModelBaseProcessor
- buildBonds()
: BALL::VIEW::MolecularControl
, BALL::VIEW::MolecularStructure
- buildBondsHashGrid3_()
: BALL::BuildBondsProcessor
- BuildBondsProcessor()
: BALL::BuildBondsProcessor
, BALL::FragmentDB::BuildBondsProcessor
, BALL::BuildBondsProcessor
- buildConnection_()
: BALL::FragmentDB::BuildBondsProcessor
- buildContextMenu()
: BALL::VIEW::VectorGridController
, BALL::VIEW::DockResultController
, BALL::VIEW::RegularData3DController
, BALL::VIEW::DatasetController
, BALL::VIEW::RaytraceableGridController
, BALL::VIEW::TrajectoryController
, BALL::VIEW::GeometricControl
- buildContextMenu_()
: BALL::VIEW::MolecularControl
- buildEdge()
: BALL::SESSingularityCleaner
- buildEndcaps()
: BALL::VIEW::MolecularStructure
- buildEndEdge()
: BALL::SESSingularityCleaner
- buildEndEdges()
: BALL::SESSingularityCleaner
- buildFirstTriangle()
: BALL::SESTriangulator
- buildFourTriangles()
: BALL::TriangulatedSphere
- buildFragmentBonds()
: BALL::FragmentDB::BuildBondsProcessor
- buildHeaderTemplate_()
: BALL::VIEW::PubChemDialog
- buildInformationTemplates_()
: BALL::VIEW::PubChemDialog
- buildInterFragmentBonds()
: BALL::FragmentDB::BuildBondsProcessor
- buildJoin_()
: BALL::TreeWidthImplementation< EditableGraph >::TreeDecompositionBuilder< OriginalGraphType >
- buildLeaf_()
: BALL::TreeWidthImplementation< EditableGraph >::TreeDecompositionBuilder< OriginalGraphType >
- buildLinkage_()
: BALL::TreeWidthImplementation< EditableGraph >::TreeDecompositionBuilder< OriginalGraphType >
- buildOpenPolygon_()
: BALL::SDGenerator
- buildPathArray_()
: BALL::Path
- buildPeptide()
: BALL::VIEW::MolecularStructure
- buildRegularPolygon_()
: BALL::SDGenerator
- buildRoot_()
: BALL::TreeWidthImplementation< EditableGraph >::TreeDecompositionBuilder< OriginalGraphType >
- buildSingle_()
: BALL::TreeWidthImplementation< EditableGraph >::TreeDecompositionBuilder< OriginalGraphType >
- buildSphericTriangles()
: BALL::SESTriangulator
- buildTable_()
: BALL::AssignRadiusProcessor
- buildTemplateSpheres()
: BALL::SESTriangulator
, BALL::SASTriangulator
- buildTriangles()
: BALL::SESTriangulator
- buildUnambiguousTriangle()
: BALL::SESTriangulator
- buildUnitCell_()
: BALL::CrystalGenerator
- buildVectorOfNonBondedAtomPairs()
: BALL::CharmmNonBonded
, BALL::AmberNonBonded
- BuriedPolar()
: BALL::BuriedPolar
- button()
: BALL::VIEW::ButtonEvent
- ButtonEvent()
: BALL::VIEW::ButtonEvent
- buttonPressEvent()
: BALL::VIEW::Scene
- buttonReleaseEvent()
: BALL::VIEW::Scene
- buttons()
: BALL::VIEW::ButtonEvent