| adapt_char_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| adapt_double_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| adapt_float_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| adapt_size_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
|
append(const SnapShot &snapshot) |
BALL::TRRFile |
[virtual] |
| box1_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| box2_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| box3_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
|
clear() |
BALL::TRRFile |
[virtual] |
| close() |
BALL::File |
|
| copy(String
source_name, String destination_name, Size
buffer_size=4096) |
BALL::File |
[static] |
| copyTo(const
String &destination_name, Size buffer_size=4096) |
BALL::File |
|
| createTemporaryFilename(String
&temporary) |
BALL::File |
[static] |
| disableTransformation(Transformation
transformation) (defined in BALL::File) |
BALL::File |
[static] |
| enableTransformation(Transformation
transformation) (defined in BALL::File) |
BALL::File |
[static] |
| File() |
BALL::File |
|
| File(const
String &name, OpenMode open_mode=std::ios::in) |
BALL::File |
|
| File(const
File &file) |
BALL::File |
|
|
flushToDisk(const std::vector< SnapShot >
&buffer) |
BALL::TRRFile |
[virtual] |
| getBoundingBoxX() const (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| getBoundingBoxY() const (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| getBoundingBoxZ() const (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| getFileStream() |
BALL::File |
|
| getName()
const |
BALL::File |
|
|
getNumberOfAtoms() const |
BALL::TrajectoryFile |
|
|
getNumberOfSnapShots() const |
BALL::TrajectoryFile |
|
| getOpenMode()
const |
BALL::File |
|
| getOriginalName() const (defined in BALL::File) |
BALL::File |
|
| getPrecision() const (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| getSize() |
BALL::File |
|
| getSize(String
name) |
BALL::File |
[static] |
| getTimestep() const (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| getTransformationManager() |
BALL::File |
|
| getTransformationManager()
const |
BALL::File |
|
| getType(String
name, bool trace_link) |
BALL::File |
[static] |
| getType(bool
trace_link) const |
BALL::File |
|
| has_forces_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| has_velocities_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| hasForces() const (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| hasVelocities() const (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| header_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
|
init() |
BALL::TRRFile |
[virtual] |
| is_open_ (defined in BALL::File) |
BALL::File |
[protected] |
| is_temporary_ (defined in BALL::File) |
BALL::File |
[protected] |
| isAccessible(String
name) |
BALL::File |
[static] |
| isAccessible()
const |
BALL::File |
|
| isCanonized()
const |
BALL::File |
|
| isClosed()
const |
BALL::File |
|
| isExecutable(String
name) |
BALL::File |
[static] |
| isExecutable()
const |
BALL::File |
|
| isOpen()
const |
BALL::File |
|
| isReadable(String
name) |
BALL::File |
[static] |
| isReadable()
const |
BALL::File |
|
| isTransformationEnabled(Transformation
transformation) (defined in BALL::File) |
BALL::File |
[static] |
| isValid()
const |
BALL::File |
|
| isWritable(String
name) |
BALL::File |
[static] |
| isWritable()
const |
BALL::File |
|
| MODE_APP |
BALL::File |
[static] |
| MODE_ATE |
BALL::File |
[static] |
| MODE_BINARY |
BALL::File |
[static] |
| MODE_IN |
BALL::File |
[static] |
| MODE_OUT |
BALL::File |
[static] |
| MODE_TRUNC |
BALL::File |
[static] |
| move(const
String &source_name, const String
&destination_name) |
BALL::File |
[static] |
| moveTo(const
String &destination_name) |
BALL::File |
|
| name_ (defined in BALL::File) |
BALL::File |
[protected] |
| number_of_atoms_ (defined in BALL::TrajectoryFile) |
BALL::TrajectoryFile |
[protected] |
| number_of_snapshots_ (defined in BALL::TrajectoryFile) |
BALL::TrajectoryFile |
[protected] |
| open(const
String &name, File::OpenMode
open_mode=std::ios::in) |
BALL::File |
|
| open_mode_ (defined in BALL::File) |
BALL::File |
[protected] |
| OpenMode
typedef |
BALL::File |
|
| operator!=(const
File &file) const |
BALL::File |
|
|
operator=(const TRRFile &file) |
BALL::TRRFile |
|
|
BALL::TrajectoryFile::operator=(const TrajectoryFile
&file) |
BALL::TrajectoryFile |
|
| BALL::File::operator=(const
File &file) |
BALL::File |
|
|
operator==(const TRRFile &file) const |
BALL::TRRFile |
|
|
BALL::TrajectoryFile::operator==(const TrajectoryFile
&file) const |
BALL::TrajectoryFile |
|
| BALL::File::operator==(const
File &file) const |
BALL::File |
|
|
operator>>(SnapShotManager &ssm) |
BALL::TRRFile |
[virtual] |
| original_name_ (defined in BALL::File) |
BALL::File |
[protected] |
| precision_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
|
read(SnapShot &snapshot) |
BALL::TRRFile |
[virtual] |
|
readHeader() |
BALL::TrajectoryFile |
[virtual] |
|
readNextHeader(TRRHeader &header) |
BALL::TRRFile |
[virtual] |
| registerTransformation(const String
&pattern, const String &exec) (defined in BALL::File) |
BALL::File |
[static] |
| remove(String
name) |
BALL::File |
[static] |
| remove() |
BALL::File |
|
| rename(String
old_path, String new_path) |
BALL::File |
[static] |
| renameTo(const
String &new_path) |
BALL::File |
|
| reopen() |
BALL::File |
|
| reopen(File::OpenMode
open_mode) |
BALL::File |
|
| setBoundingBox(const Vector3 &x, const
Vector3 &y, const Vector3 &z) (defined in BALL::TRRFile) |
BALL::TRRFile |
|
| setForceStorage(bool storage) (defined in
BALL::TRRFile) |
BALL::TRRFile |
|
| setName(const
String &name) |
BALL::File |
|
| setPrecision(const Size precision) (defined in
BALL::TRRFile) |
BALL::TRRFile |
|
| setTimestep(float timestep) (defined in
BALL::TRRFile) |
BALL::TRRFile |
|
| setVelocityStorage(bool storage) (defined in
BALL::TRRFile) |
BALL::TRRFile |
|
| timestep_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
| timestep_index_ (defined in BALL::TRRFile) |
BALL::TRRFile |
[protected] |
|
TrajectoryFile() |
BALL::TrajectoryFile |
|
|
TrajectoryFile(const TrajectoryFile &file) |
BALL::TrajectoryFile |
|
|
TrajectoryFile(const String &filename,
File::OpenMode open_mode=std::ios::in) |
BALL::TrajectoryFile |
|
| Transformation
enum name |
BALL::File |
|
| TRANSFORMATION__EXEC enum value (defined in
BALL::File) |
BALL::File |
|
| TRANSFORMATION__FILTER enum value (defined in
BALL::File) |
BALL::File |
|
| TRANSFORMATION__URL enum value (defined in
BALL::File) |
BALL::File |
|
| TRANSFORMATION_EXEC_PREFIX |
BALL::File |
[static] |
| TRANSFORMATION_FILE_PREFIX |
BALL::File |
[static] |
| TRANSFORMATION_FTP_PREFIX |
BALL::File |
[static] |
| TRANSFORMATION_HTTP_PREFIX |
BALL::File |
[static] |
| transformation_manager_ (defined in BALL::File) |
BALL::File |
[protected, static] |
| transformation_methods_ (defined in BALL::File) |
BALL::File |
[protected, static] |
|
TRRFile() |
BALL::TRRFile |
|
|
TRRFile(const TRRFile &file) |
BALL::TRRFile |
|
|
TRRFile(const String &name, File::OpenMode
open_mode=std::ios::in) |
BALL::TRRFile |
|
| truncate(String
path, Size size=0) |
BALL::File |
[static] |
| truncate(Size
size=0) |
BALL::File |
|
| Type
enum name |
BALL::File |
|
| TYPE__BLOCK_SPECIAL_FILE enum value (defined in
BALL::File) |
BALL::File |
|
| TYPE__CHAR_SPECIAL_FILE enum value (defined in
BALL::File) |
BALL::File |
|
| TYPE__DIRECTORY enum value (defined in BALL::File) |
BALL::File |
|
| TYPE__FIFO_SPECIAL_FILE enum value (defined in
BALL::File) |
BALL::File |
|
| TYPE__REGULAR_FILE enum value (defined in
BALL::File) |
BALL::File |
|
| TYPE__SOCKET enum value (defined in BALL::File) |
BALL::File |
|
| TYPE__SYMBOLIC_LINK enum value (defined in
BALL::File) |
BALL::File |
|
| TYPE__UNKNOWN enum value (defined in BALL::File) |
BALL::File |
|
| unregisterTransformation(const String
&pattern) (defined in BALL::File) |
BALL::File |
[static] |
|
writeHeader() |
BALL::TrajectoryFile |
[virtual] |
|
writeNextHeader(const TRRHeader &header) |
BALL::TRRFile |
[virtual] |
| ~File() |
BALL::File |
[virtual] |
|
~TrajectoryFile() |
BALL::TrajectoryFile |
[virtual] |
|
~TRRFile() |
BALL::TRRFile |
[virtual] |
