BALL: Class Members

- r -

R : BALL::Constant
r : BALL::FDPB::FastAtomStruct
r0 : BALL::MMFF94StretchBend::Stretch , BALL::QuadraticBondStretch::Values , BALL::MMFF94StretchParameters::EmpiricalBondData
r0_ : BALL::QuadraticBondStretch
r0_normal : BALL::MMFF94StretchParameters::BondData
r0_sbmb : BALL::MMFF94StretchParameters::BondData
r1_ : BALL::ChemScoreMetal
r1_offset_ : BALL::BuriedPolar , BALL::Lipophilic
r2_ : BALL::ChemScoreMetal
R2_ : BALL::QSAR::RegressionValidation
r2_offset_ : BALL::BuriedPolar , BALL::Lipophilic
r_direction_ : BALL::VIEW::LightSource
R_ij_o_ : BALL::PairExpRDFIntegrator
r_max_ : BALL::ReducedSurface
r_min : BALL::CharmmEEF1::Values
R_min_ : BALL::CharmmEEF1
r_position_ : BALL::VIEW::LightSource
RAD_PER_DEG : BALL::Constant
radii : BALL::MMFF94StretchParameters
radii_ : BALL::ElectrostaticPotentialCalculator
radius : BALL::TCircle3< T > , BALL::TSphere3< T > , BALL::JohnsonBoveyShiftProcessor::Ring , BALL::SolventAtomDescriptor , BALL::BindingPocketProcessor::Sphere_
radius_ : BALL::VIEW::Tube , BALL::VIEW::TwoColoredTube , BALL::Atom , BALL::VIEW::HBondModelProcessor
radius_a_ : BALL::GeometricFit
radius_b_ : BALL::GeometricFit
RADIUS_CARBON : BALL::BindingPocketProcessor::Option , BALL::BindingPocketProcessor::Default
radius_factor_ : BALL::VIEW::AddVanDerWaalsModel
RADIUS_HYDROGEN : BALL::BindingPocketProcessor::Option , BALL::BindingPocketProcessor::Default
RADIUS_NITROGEN : BALL::BindingPocketProcessor::Option , BALL::BindingPocketProcessor::Default
radius_of_torus_ : BALL::RSEdge
radius_offset_ : BALL::SurfaceProcessor
RADIUS_OXYGEN : BALL::BindingPocketProcessor::Option , BALL::BindingPocketProcessor::Default
radius_processor_ : BALL::VIEW::DockDialog , BALL::VIEW::FDPBDialog
radius_rule_processor_ : BALL::VIEW::DockDialog , BALL::VIEW::FDPBDialog
RADIUS_SULFUR : BALL::BindingPocketProcessor::Option , BALL::BindingPocketProcessor::Default
range_ : BALL::PiecewiseFunction
rank_ : BALL::MPISupport
rb_ : BALL::VIEW::Scene
rdf_ : BALL::RDFIntegrator , BALL::RDFSection
RDF_FILENAME : BALL::Pair6_12InteractionEnergyProcessor::Option , BALL::Pair6_12InteractionEnergyProcessor::Default , BALL::PairExpInteractionEnergyProcessor::Option , BALL::PairExpInteractionEnergyProcessor::Default
rdf_indices_ : BALL::RDFParameter
rdf_integrator_ : BALL::Pair6_12InteractionEnergyProcessor
rdf_list_ : BALL::RDFParameter
rdf_parameter_ : BALL::Pair6_12InteractionEnergyProcessor , BALL::PairExpInteractionEnergyProcessor
reacting_center_status : BALL::MOLFile::BondStruct
reaction_component_number : BALL::MOLFile::AtomStruct
reaction_component_type : BALL::MOLFile::AtomStruct
reaction_field_energy_ : BALL::FDPB
read_all_pdb_models_ : BALL::VIEW::MolecularFileDialog
read_atoms_ : BALL::SDFile
read_sd_descriptors : BALL::QSAR::InputConfiguration
read_start_ : BALL::GAFFCESParser
REAL : BALL::RegularExpression
real_renderer_ : BALL::VIEW::TilingRenderer
rebuild_ : BALL::VIEW::Representation
rec_edges_ : BALL::SmartsParser
rec_matches_ : BALL::SmartsMatcher
rec_struct_core_ : BALL::SmartsMatcher::RecStruct_
rec_struct_pool_ : BALL::SmartsMatcher::RecStructPool_
receive_updates_ : BALL::VIEW::RenderSetup
received_composite_ : BALL::VIEW::ServerWidget::BALLViewServer
receiver_ : BALL::VIEW::InputDeviceDriver
receiverLock : BALL::VIEW::InputDeviceDriver
receptor_ : BALL::NonpolarSolvation , BALL::RotationalEntropyLoss
receptor_rings_ : BALL::AromaticRingStacking
recieve_buffer : BALL::RingPerceptionProcessor::TNode_
record_animation_action_ : BALL::VIEW::Scene
record_fields_ : BALL::PDBFile
record_name : BALL::PDB::RecordSCALE1 , BALL::PDB::RecordSCALE2 , BALL::PDB::RecordSCALE3 , BALL::PDB::RecordSEQADV , BALL::PDB::RecordSEQRES , BALL::PDB::RecordSHEET , BALL::PDB::RecordSIGATM , BALL::PDB::RecordSIGUIJ , BALL::PDB::RecordSITE , BALL::PDB::RecordSLTBRG , BALL::PDB::RecordSOURCE , BALL::PDB::RecordSPRSDE , BALL::PDB::RecordSSBOND , BALL::PDB::RecordTER , BALL::PDB::RecordTITLE , BALL::PDB::RecordTURN , BALL::PDB::RecordTVECT , BALL::PDB::RecordANISOU , BALL::PDB::RecordATOM , BALL::PDB::RecordAUTHOR , BALL::PDB::RecordCAVEAT , BALL::PDB::RecordCISPEP , BALL::PDB::RecordCOMPND , BALL::PDB::RecordCONECT , BALL::PDB::RecordCRYST1 , BALL::PDB::RecordDBREF , BALL::PDB::RecordEND , BALL::PDB::RecordENDMDL , BALL::PDB::RecordEXPDTA , BALL::PDB::RecordFORMUL , BALL::PDB::RecordFTNOTE , BALL::PDB::RecordHEADER , BALL::PDB::RecordHELIX , BALL::PDB::RecordHET , BALL::PDB::RecordHETATM , BALL::PDB::RecordHETNAM , BALL::PDB::RecordHETSYN , BALL::PDB::RecordHYDBND , BALL::PDB::RecordJRNL , BALL::PDB::RecordKEYWDS , BALL::PDB::RecordLINK , BALL::PDB::RecordMASTER , BALL::PDB::RecordMODEL , BALL::PDB::RecordMODRES , BALL::PDB::RecordMTRIX1 , BALL::PDB::RecordMTRIX2 , BALL::PDB::RecordMTRIX3 , BALL::PDB::RecordOBSLTE , BALL::PDB::RecordORIGX1 , BALL::PDB::RecordORIGX2 , BALL::PDB::RecordORIGX3 , BALL::PDB::RecordREMARK , BALL::PDB::RecordREVDAT
record_serial_number : BALL::PDB::RecordCISPEP
record_type : BALL::PDB::RecordTypeFormat , BALL::PDB::RecordANISOU , BALL::PDB::RecordATOM , BALL::PDB::RecordAUTHOR , BALL::PDB::RecordCAVEAT , BALL::PDB::RecordCISPEP , BALL::PDB::RecordCOMPND , BALL::PDB::RecordCONECT , BALL::PDB::RecordCRYST1 , BALL::PDB::RecordDBREF , BALL::PDB::RecordEND , BALL::PDB::RecordENDMDL , BALL::PDB::RecordEXPDTA , BALL::PDB::RecordFORMUL , BALL::PDB::RecordFTNOTE , BALL::PDB::RecordHEADER , BALL::PDB::RecordHELIX , BALL::PDB::RecordHET , BALL::PDB::RecordHETATM , BALL::PDB::RecordHETNAM , BALL::PDB::RecordHETSYN , BALL::PDB::RecordHYDBND , BALL::PDB::RecordJRNL , BALL::PDB::RecordKEYWDS , BALL::PDB::RecordLINK , BALL::PDB::RecordMASTER , BALL::PDB::RecordMODEL , BALL::PDB::RecordMODRES , BALL::PDB::RecordMTRIX1 , BALL::PDB::RecordMTRIX2 , BALL::PDB::RecordMTRIX3 , BALL::PDB::RecordOBSLTE , BALL::PDB::RecordORIGX1 , BALL::PDB::RecordORIGX2 , BALL::PDB::RecordORIGX3 , BALL::PDB::RecordREMARK , BALL::PDB::RecordREVDAT , BALL::PDB::RecordSCALE1 , BALL::PDB::RecordSCALE2 , BALL::PDB::RecordSCALE3 , BALL::PDB::RecordSEQADV , BALL::PDB::RecordSEQRES , BALL::PDB::RecordSHEET , BALL::PDB::RecordSIGATM , BALL::PDB::RecordSIGUIJ , BALL::PDB::RecordSITE , BALL::PDB::RecordSLTBRG , BALL::PDB::RecordSOURCE , BALL::PDB::RecordSPRSDE , BALL::PDB::RecordSSBOND , BALL::PDB::RecordTER , BALL::PDB::RecordTITLE , BALL::PDB::RecordTURN , BALL::PDB::RecordTVECT
recording_ : BALL::VIEW::TestFramework
records_ : BALL::PDBRecords
recursive_ : BALL::SmartsParser::SPNode , BALL::SmartsParser
red_ : BALL::VIEW::ColorRGBA
redock_partner1_ : BALL::VIEW::DockResultDialog
redock_partner2_ : BALL::VIEW::DockResultDialog
redraw_queue_ : BALL::SDGenerator
reduced_surface_ : BALL::SolventAccessibleSurface , BALL::SolventExcludedSurface
REESTIMATE_BONDORDERS_RINGS : BALL::BuildBondsProcessor::Option , BALL::BuildBondsProcessor::Default
reference : BALL::NMRStarFile::NMRAtomDataSet , BALL::NMRAtomDataSet , BALL::NMRStarFile::NMRAtomDataSet
reference_composite_ : BALL::FragmentDistanceCollector
reference_method : BALL::NMRStarFile::ShiftReferenceElement , BALL::ShiftReferenceElement , BALL::NMRStarFile::ShiftReferenceElement
reference_options_ : BALL::NMRStarFile
REFERENCE_TEMPERATURE : BALL::MolecularDynamics::Option , BALL::MolecularDynamics::Default
reference_temperature_ : BALL::MolecularDynamics
reference_type : BALL::NMRStarFile::ShiftReferenceElement , BALL::ShiftReferenceElement , BALL::NMRStarFile::ShiftReferenceElement
reflective_color : BALL::VIEW::Stage::RaytracingMaterial
reflective_intensity : BALL::VIEW::Stage::RaytracingMaterial
regex_ : BALL::RegularExpression
register_ : BALL::VIEW::RegisterHelpSystemMessage
registered_at_ : BALL::LogStreamNotifier
registered_models : BALL::QSAR::Registry
registered_modules_ : BALL::ShiftModel
registered_objects_ : BALL::VIEW::PreferencesEntry
registry_ : BALL::VIEW::ShortcutTableModel , BALL::QSAR::RegistryEntry
regr_model_ : BALL::QSAR::RegressionValidation
regression : BALL::QSAR::RegistryEntry
regression_statistics : BALL::QSAR::Registry
related_database_entries : BALL::NMRStarFile::MolecularSystem
relation_type : BALL::NMRStarFile::MolecularSystem::RelatedDB
relative_ : BALL::VIEW::LightSource
RELEASE_DATE_AND_TIME : BALL::VersionInfo
RELEASE_WHAT_STRING : BALL::VersionInfo
remark_number : BALL::PDB::RecordREMARK
remark_records : BALL::PDB::BookKeeping
remoteness_indicator_ : BALL::PDBAtom
remove_correlated : BALL::QSAR::FeatureSelectionConfiguration
render_mode_ : BALL::VIEW::GLRenderer
render_mutex_ : BALL::VIEW::RenderSetup
render_timer_ : BALL::VIEW::MainControl
renderer : BALL::VIEW::RenderSetup
renderers_ : BALL::VIEW::Scene
rendering_paused_ : BALL::VIEW::RenderSetup
rep_ : BALL::VIEW::UpdateRepresentationThread , BALL::VIEW::ModifyRepresentationDialog , BALL::VIEW::DisplayProperties
rep_label_ : BALL::VIEW::MainControl
rep_label_delta_ : BALL::VIEW::MainControl
rep_label_nr_ : BALL::VIEW::MainControl
rep_to_buffers_ : BALL::VIEW::GLRenderer
replacing_entry_code : BALL::PDB::RecordOBSLTE
reply_ : BALL::SimpleDownloaderHelper::BasicHelper
representation_ : BALL::VIEW::RepresentationMessage , BALL::RadialDistributionFunction
representation_to_item_ : BALL::VIEW::GeometricControl
representations_ : BALL::VIEW::RepresentationManager , BALL::VIEW::POVRenderer
reps : BALL::VIEW::ExportGeometryDialog
reps_ : BALL::VIEW::ClippingPlane
res : BALL::HBondProcessor::ResidueData
residue : BALL::PDB::RecordHETATM , BALL::PDB::RecordHYDBND::HydrogenAtom , BALL::PDB::RecordLINK::LinkPartner , BALL::PDB::RecordSIGUIJ , BALL::PDB::RecordATOM , BALL::PDB::RecordCISPEP , BALL::PDB::RecordHET , BALL::PDB::RecordHYDBND::HydrogenPartnerAtom , BALL::PDB::RecordSEQADV , BALL::PDB::RecordSIGATM , BALL::PDB::RecordSLTBRG::PartnerAtom , BALL::PDB::RecordTER , BALL::PDB::RecordANISOU , BALL::PDB::RecordMODRES , BALL::PDB::RecordSITE , BALL::PDB::Structure::AtomEntry
residue_data_ : BALL::HBondProcessor
residue_id : BALL::PDB::AdditionalAtomInfo
residue_in_current_strand : BALL::PDB::RecordSHEET
residue_in_previous_strand : BALL::PDB::RecordSHEET
residue_insertion_code : BALL::PDB::AdditionalAtomInfo
residue_label : BALL::NMRAtomData , BALL::NMRStarFile::NMRAtomData
residue_map_ : BALL::PDBFile , BALL::VIEW::ResidueNumberColorProcessor
residue_name : BALL::ResidueTorsions::Data , BALL::PDB::RecordSEQRES , BALL::PDB::AdditionalAtomInfo
residue_name_ : BALL::PDBFile
residue_ptr_to_position_ : BALL::HBondProcessor
residue_seq_code : BALL::NMRAtomData , BALL::NMRStarFile::NMRAtomData
residue_sequence : BALL::NMRStarFile::MonomericPolymer
residue_sequence_number_ : BALL::PDBFile
residue_torsions_ : BALL::CharmmTorsion
residues : BALL::VIEW::AddBackboneModel::ModelPart
residues_by_index : BALL::NMRStarFile::MonomericPolymer
residues_to_be_rendered_ : BALL::VIEW::AddBackboneModel
residues_with_rings_ : BALL::JohnsonBoveyShiftProcessor
resize_to_parent_ : BALL::VIEW::SDWidget
restart_ : BALL::TCPServer
restart_frequency_ : BALL::ConjugateGradientMinimizer
result_ : BALL::SimpleDownloaderHelper::DLArrayHelper , BALL::SimpleDownloaderHelper::DLThread , BALL::RombergIntegrator< Function, DataType >
results : BALL::FDPB
results_ : BALL::VIEW::PyWidget
return_average_ : BALL::CubicSpline2D , BALL::CubicSpline1D
RGB_24 : BALL::VIEW::PixelFormat
RGB_32 : BALL::VIEW::PixelFormat
RGB_3_2_2 : BALL::VIEW::PixelFormat
RGBA_32 : BALL::VIEW::PixelFormat
RGBF_96 : BALL::VIEW::PixelFormat
rho : BALL::QSAR::LibsvmModel::svm_model
rho_ : BALL::StrangLBFGSMinimizer
RHO_0 : BALL::GeneralizedBornModel::Default , BALL::GeneralizedBornModel::Option
rho_0_ : BALL::GeneralizedBornModel::GBParameters , BALL::GeneralizedBornModel
ribbon_height_ : BALL::VIEW::AddBackboneModel
ribbon_mode_ : BALL::VIEW::AddBackboneModel
ribbon_radius_ : BALL::VIEW::AddCartoonModel
ribbon_width_ : BALL::VIEW::AddCartoonModel , BALL::VIEW::AddBackboneModel
right_ : BALL::VIEW::GLRenderer
right_vector_ : BALL::TBox3< T > , BALL::VIEW::Camera
rij : BALL::MMFF94NonBonded::NonBondedPairData
rij_ : BALL::MMFF94VDWParameters
rij_7 : BALL::MMFF94NonBonded::NonBondedPairData
rij_7_ : BALL::MMFF94VDWParameters
ring_analyser_ : BALL::SDGenerator
ring_atoms_ : BALL::VIEW::AtomBondModelBaseProcessor , BALL::RingFinder , BALL::HaighMallionShiftProcessor , BALL::CHPI::AromaticRing , BALL::AddHydrogenProcessor
ring_bonds_ : BALL::VIEW::AddBallAndStickModel
ring_connections_ : BALL::SmartsParser
ring_proc_ : BALL::SMARTSPredicate
ring_systems_ : BALL::RingAnalyser
rings_ : BALL::RingAnalyser , BALL::MMFF94 , BALL::VIEW::AtomBondModelBaseProcessor , BALL::Kekuliser , BALL::RingPerceptionProcessor , BALL::AtomTyper , BALL::JohnsonBoveyShiftProcessor
rings_per_bond_ : BALL::RingAnalyser
rms : BALL::Gradient
RMS_CRITERION : BALL::FDPB::Default , BALL::FDPB::Option
rmsd_ : BALL::StructureMapper
root : BALL::GAFFCESParser
root_ : BALL::SmartsParser , BALL::VIEW::AssignBondOrderResultsDialog , BALL::ResourceFile
root_atom : BALL::MOL2File::SubstructureStruct
root_predicate : BALL::GAFFCESParser
ROT_ALGORITHM : BALL::RotationalEntropyLoss::Option , BALL::RotationalEntropyLoss::Default
ROT_BIND_OFFSET : BALL::RotationalEntropyLoss::Default , BALL::RotationalEntropyLoss::Option
ROT_GRID_SPACING : BALL::RotationalEntropyLoss::Default , BALL::RotationalEntropyLoss::Option
ROT_METHOD : BALL::RotationalEntropyLoss::Option , BALL::RotationalEntropyLoss::Default
rotamers_ : BALL::ResidueRotamerSet
rotatable_bonds_ : BALL::RotationalEntropyLoss
rotate_action_ : BALL::VIEW::Scene
rotation_ : BALL::VIEW::STLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::TransformationEvent6D , BALL::VIEW::VRMLRenderer
row_ : BALL::VIEW::AtomOverview::ApplyProcessor
row_averages_ : BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
row_axis_ : BALL::CCP4File
row_spacing_ : BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
rs_ : BALL::RSComputer , BALL::MMFF94VDWParameters
rsedge_ : BALL::SESFace , BALL::SESEdge
rsface_ : BALL::SESFace
rsvertex_ : BALL::SESFace
rt_contour_surface_dialog_ : BALL::VIEW::RaytraceableGridController
rt_material_ : BALL::VIEW::Stage
rule_map_ : BALL::RuleEvaluator
rule_times : BALL::AtomTyper
rule_types_ : BALL::MMFF94ChargeProcessor
rules_ : BALL::AtomTyper
run_test : BALL::VIEW::TestFramework
running_ : BALL::VIEW::PyWidget
running_plugins_ : BALL::PluginHandler
runtime_ : BALL::VIEW::TestFramework