- V :
BALL::AmberTorsion::SingleAmberTorsion ,
BALL::CharmmTorsion::SingleCharmmTorsion ,
BALL::CosineTorsion::SingleValues ,
BALL::CharmmEEF1::Values
- v1 :
BALL::TSurface< T >::Triangle ,
BALL::MMFF94Torsion::Torsion
- v2 :
BALL::MMFF94Torsion::Torsion ,
BALL::TSurface< T >::Triangle
- v3 :
BALL::TSurface< T >::Triangle ,
BALL::MMFF94Torsion::Torsion
- V_ :
BALL::CharmmEEF1
- vacuum_dc_ :
BALL::PolarSolvation
- VACUUM_PERMEABILITY :
BALL::Constant
- VACUUM_PERMITTIVITY :
BALL::Constant
- val :
BALL::MMFF94AtomType
- val_type :
BALL::QSAR::ValidationConfiguration
- valence :
BALL::MOLFile::AtomStruct
- valid :
BALL::MMFF94AtomType ,
BALL::MMFF94VDWParameters::VDWEntry ,
BALL::AssignBondOrderProcessor::Solution_
- valid_ :
BALL::MolecularDynamics ,
BALL::EnergyMinimizer ,
BALL::ShiftModel ,
BALL::ShiftModel1D ,
BALL::ShiftModel2D ,
BALL::ShiftModule ,
BALL::PyInterpreter ,
BALL::SolventDescriptor ,
BALL::AssignBondOrderProcessor ,
BALL::FragmentDB ,
BALL::EnergyProcessor ,
BALL::HybridisationProcessor ,
BALL::RadialDistributionFunction ,
BALL::INIFile ,
BALL::RDFIntegrator ,
BALL::ResidueRotamerSet ,
BALL::NMRStarFile ,
BALL::VIEW::PyWidget ,
BALL::Parameters ,
BALL::ParameterSection ,
BALL::PiecewiseFunction ,
BALL::RandomNumberGenerator ,
BALL::ForceField ,
BALL::Gradient ,
BALL::RuleEvaluator ,
BALL::RuleProcessor
- valid_pattern_ :
BALL::RegularExpression
- validation :
BALL::QSAR::ClassificationModel ,
BALL::QSAR::RegressionModel
- validation_data :
BALL::QSAR::ValidationConfiguration
- validation_fraction :
BALL::QSAR::InputConfiguration ,
BALL::QSAR::InputPartitioningConfiguration
- validation_names :
BALL::QSAR::Registry
- validation_statistic_ :
BALL::QSAR::Validation
- validator_ :
BALL::VIEW::PyWidget
- value :
BALL::HashSet< Key >::Node ,
BALL::MOL2File::CommentStruct ,
BALL::TAngle< T > ,
BALL::GeometricFit::Peak_
- value_ :
BALL::VIEW::ColorUnitHue ,
BALL::ResourceEntry ,
BALL::SmartsParser::SPAtom::Property ,
BALL::VIEW::ColorHSV ,
BALL::VIEW::ColorUnit
- value_index_ :
BALL::QuadraticAngleBend
- VALUE_NA :
BALL::Peptides::NameConverter
- value_unit :
BALL::NMRStarFile::Sample::Component
- values :
BALL::TContourSurface< T >::Cube ,
BALL::CIFFile::Item ,
BALL::NMRStarFile::SampleCondition ,
BALL::CharmmEEF1::Data ,
BALL::CosineTorsion::Values ,
BALL::CosineTorsion::Data ,
BALL::CosineTorsion::SingleData ,
BALL::LennardJones::Data ,
BALL::Potential1210::Data ,
BALL::QuadraticAngleBend::Data ,
BALL::QuadraticBondStretch::Data ,
BALL::QuadraticImproperTorsion::Data
- values_ :
BALL::QuadraticAngleBend
- van_der_waals_ :
BALL::AmberNonBonded
- van_der_waals_parameters_ :
BALL::CharmmNonBonded
- van_der_waals_parameters_14_ :
BALL::CharmmNonBonded
- van_der_waals_radius_ : BALL::Element
- variable_names_ :
BALL::ParameterSection
- variant_sites_ :
BALL::Enumerator< Container, SiteIterator, Variant
>
- VDW :
BALL::SLICKEnergy::Option ,
BALL::SLICKEnergy::Default ,
BALL::SLICKScore::Option ,
BALL::SLICKScore::Default
- VDW_CUT_OFF :
BALL::VanDerWaals::Option ,
BALL::VanDerWaals::Default
- vdw_cut_off_ :
BALL::MMFF94NonBonded
- VDW_CUT_ON :
BALL::VanDerWaals::Option ,
BALL::VanDerWaals::Default
- vdw_cut_on_ :
BALL::MMFF94NonBonded
- VDW_CUTOFF :
BALL::AmberFF::Option ,
BALL::AmberFF::Default ,
BALL::CharmmFF::Option ,
BALL::CharmmFF::Default ,
BALL::MMFF94::Option ,
BALL::MMFF94::Default
- VDW_CUTON :
BALL::AmberFF::Option ,
BALL::AmberFF::Default ,
BALL::CharmmFF::Option ,
BALL::CharmmFF::Default ,
BALL::MMFF94::Option ,
BALL::MMFF94::Default
- vdw_enabled_ :
BALL::MMFF94NonBonded
- vdw_energy :
BALL::MMFF94NonBonded::NonBondedPairData
- vdw_energy_ :
BALL::AmberNonBonded ,
BALL::CharmmNonBonded ,
BALL::MMFF94NonBonded
- vdw_factor_ :
BALL::SurfaceProcessor
- vdw_ligand_ :
BALL::VanDerWaals
- VDW_METHOD :
BALL::VanDerWaals::Option ,
BALL::VanDerWaals::Default
- vdw_parameters_ :
BALL::MMFF94NonBonded
- vdw_receptor_ :
BALL::VanDerWaals
- VDW_SOFTENING_LIMIT :
BALL::VanDerWaals::Option ,
BALL::VanDerWaals::Default
- vdw_solvent_ :
BALL::NonpolarSolvation
- vdw_system_ :
BALL::VanDerWaals
- vector_ :
BALL::ColumnIteratorTraits< valuetype, mtraits > ,
BALL::DiagonalIteratorTraits< valuetype, mtraits >
,
BALL::RowIteratorTraits< valuetype, mtraits >
- vector_grid_ :
BALL::VIEW::FieldLineCreator
- velocity_ :
BALL::Atom
- velocity_data_size :
BALL::TRRFile::TRRHeader
- VERBOSITY :
BALL::HydrogenBond::Option ,
BALL::Pair6_12RDFIntegrator::Default ,
BALL::PDBFile::Option ,
BALL::PDBFile::Default ,
BALL::EmpiricalHSShiftProcessor::Option ,
BALL::EmpiricalHSShiftProcessor::Default ,
BALL::ScoringFunction::Option ,
BALL::FDPB::Default ,
BALL::AromaticRingStacking::Option ,
BALL::AromaticRingStacking::Default ,
BALL::BuriedPolar::Option ,
BALL::CHPI::Option ,
BALL::CHPI::Default ,
BALL::ReissCavFreeEnergyProcessor::Default ,
BALL::PCMCavFreeEnergyProcessor::Default ,
BALL::Lipophilic::Option ,
BALL::Lipophilic::Default ,
BALL::NonpolarSolvation::Option ,
BALL::PolarSolvation::Option ,
BALL::PolarSolvation::Default ,
BALL::GeneralizedBornModel::Default ,
BALL::PierottiCavFreeEnergyProcessor::Default ,
BALL::VanDerWaals::Option ,
BALL::VanDerWaals::Default ,
BALL::PierottiCavFreeEnergyProcessor::Option ,
BALL::PCMCavFreeEnergyProcessor::Option ,
BALL::GeneralizedBornModel::Option ,
BALL::Pair6_12InteractionEnergyProcessor::Option ,
BALL::Pair6_12InteractionEnergyProcessor::Default ,
BALL::PairExpRDFIntegrator::Default ,
BALL::HydrogenBond::Default ,
BALL::PairExpInteractionEnergyProcessor::Option ,
BALL::PairExpInteractionEnergyProcessor::Default ,
BALL::PairExpRDFIntegrator::Option ,
BALL::Pair6_12RDFIntegrator::Option ,
BALL::FDPB::Option ,
BALL::ReissCavFreeEnergyProcessor::Option ,
BALL::UhligCavFreeEnergyProcessor::Option ,
BALL::RotationalEntropyLoss::Option ,
BALL::RotationalEntropyLoss::Default ,
BALL::NonpolarSolvation::Default ,
BALL::UhligCavFreeEnergyProcessor::Default ,
BALL::BuriedPolar::Default ,
BALL::ScoringFunction::Default ,
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- verbosity_ :
BALL::NonpolarSolvation ,
BALL::PDBFile ,
BALL::CubicSpline1D ,
BALL::DCDFile ,
BALL::EmpiricalHSShiftProcessor::PropertiesForShift_ ,
BALL::CHPI ,
BALL::VanDerWaals ,
BALL::BuriedPolar ,
BALL::PolarSolvation ,
BALL::Lipophilic ,
BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_ ,
BALL::CubicSpline2D ,
BALL::EmpiricalHSShiftProcessor
- VERBOSITY_LEVEL_CRITICAL :
BALL::CubicSpline1D ,
BALL::EmpiricalHSShiftProcessor ,
BALL::CubicSpline2D
- VERBOSITY_LEVEL_DEBUG :
BALL::CubicSpline1D ,
BALL::EmpiricalHSShiftProcessor ,
BALL::CubicSpline2D
- version :
BALL::MOLFile::CountsStruct
- VERSION :
BALL::TRRFile::TRRHeader
- version_ :
BALL::ParameterSection
- vertex :
BALL::VIEW::QuadMesh ,
BALL::TSurface< T >
- vertex1_ :
BALL::VIEW::Vertex2 ,
BALL::VIEW::Vertex
- vertex1_ptr_ :
BALL::VIEW::Vertex ,
BALL::VIEW::Vertex2
- vertex2_ :
BALL::VIEW::Vertex2
- vertex2_ptr_ :
BALL::VIEW::Vertex2
- vertex_ :
BALL::GraphTriangle< Vertex, Edge, Face > ,
BALL::GraphFace< Vertex, Edge, Face > ,
BALL::GraphEdge< Vertex, Edge, Face >
- vertex_grid_ :
BALL::SESComputer ,
BALL::SESSingularityCleaner
- vertices :
BALL::VIEW::MultiLine
- vertices_ :
BALL::SolventExcludedSurface ,
BALL::RSComputer ,
BALL::ReducedSurface ,
BALL::SolventAccessibleSurface ,
BALL::VIEW::ModifyRepresentationDialog ,
BALL::VIEW::MeshBuffer
- view_point_ :
BALL::VIEW::Camera
- view_vector_ :
BALL::VIEW::Camera
- vir_size :
BALL::TRRFile::TRRHeader
- virtual_bond_ :
BALL::AssignBondOrderProcessor
- virtual_bond_index_to_atom_ :
BALL::AssignBondOrderProcessor
- virtual_bond_index_to_number_of_virtual_hydrogens_ :
BALL::AssignBondOrderProcessor
- visited_ :
BALL::RingPerceptionProcessor
- visited_atoms :
BALL::SmartsMatcher::RecStruct_ ,
BALL::SmartsMatcher::RecStructCore_
- visited_bonds :
BALL::SmartsMatcher::RecStruct_ ,
BALL::SmartsMatcher::RecStructCore_
- visited_bonds_ :
BALL::RingPerceptionProcessor ,
BALL::RingFinder
- visited_edges :
BALL::SmartsMatcher::RecStructCore_ ,
BALL::SmartsMatcher::RecStruct_
- volume_width_ :
BALL::VIEW::Renderer
- vrml_ :
BALL::VIEW::ExportGeometryDialog
- vrml_nr_ :
BALL::VIEW::Scene
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