- d :
BALL::TLine3< T > ,
BALL::BindingPocketProcessor::Sphere_
- D_1_ :
BALL::ConjugateGradientMinimizer
- D_4_ :
BALL::ConjugateGradientMinimizer
- dashed_bonds_ :
BALL::VIEW::AddBallAndStickModel
- dat_ :
BALL::Bruker2DFile
- data :
BALL::CIFFile::Datablock ,
BALL::GAMESSDatFile::block ,
BALL::QSAR::ValidationConfiguration ,
BALL::QSAR::PredictionConfiguration ,
BALL::QSAR::Model ,
BALL::VIEW::FrameBuffer ,
BALL::HashGridBox3< Item >
- data_ :
BALL::TRegularData1D< ValueType > ,
BALL::TRegularData2D< ValueType > ,
BALL::TRegularData3D< ValueType > ,
BALL::MMFF94AtomTypes ,
BALL::Spectrum< DataT, PeakT, PositionT > ,
BALL::NodeItem< Node, Edge > ,
BALL::EdgeItem< Node, Edge > ,
BALL::BinaryFileAdaptor< T > ,
BALL::VIEW::RegularData1DWidget ,
BALL::VIEW::RegularData2DWidget ,
BALL::NamedProperty ,
BALL::TContourLine< T >
- data_file :
BALL::QSAR::ModelConfiguration ,
BALL::QSAR::FeatureSelectionConfiguration
- data_folder_ :
BALL::PartialChargeBase ,
BALL::PartialChargeProcessor ,
BALL::QSAR::QSARData ,
BALL::SimpleBase
- dataAdress_ :
BALL::TFFT1D< ComplexTraits > ,
BALL::TFFT2D< ComplexTraits > ,
BALL::TFFT3D< ComplexTraits >
- database :
BALL::PDB::RecordSEQADV
- datablocks_ :
BALL::CIFFile
- datablocks_hash_ :
BALL::CIFFile
- dataitem :
BALL::CIFFile::Datacontent
- dataLength_ :
BALL::TFFT2D< ComplexTraits > ,
BALL::TFFT3D< ComplexTraits >
- dataset_ :
BALL::VIEW::DatasetMessage
- dataset_to_item_ :
BALL::VIEW::DatasetController
- dataset_type_ :
BALL::VIEW::DatasetMessage
- date :
BALL::PDB::RecordSPRSDE
- db_ :
BALL::DNAMutator
- db_id_code :
BALL::PDB::RecordSEQADV
- db_res :
BALL::PDB::RecordSEQADV
- db_seq :
BALL::PDB::RecordSEQADV
- dc_ :
BALL::MMFF94NonBonded
- DC_SOLUTE :
BALL::GeneralizedBornModel::Option ,
BALL::GeneralizedBornModel::Default
- dc_solute_ :
BALL::GeneralizedBornModel::GBParameters ,
BALL::GeneralizedBornModel
- DC_SOLVENT :
BALL::GeneralizedBornModel::Option ,
BALL::GeneralizedBornModel::Default
- dc_solvent_ :
BALL::GeneralizedBornModel::GBParameters ,
BALL::GeneralizedBornModel
- dcd_file_ :
BALL::VIEW::SimulationThread
- DEBYE :
BALL::FDPB::Boundary
- default_color_ :
BALL::VIEW::ColorProcessor
- default_communicator_ :
BALL::MPISupport
- default_correlation_cutoff :
BALL::QSAR::Registry
- DEFAULT_FRAGMENT_DB :
BALL::RotamerLibrary
- default_gridsearch_par1_start :
BALL::QSAR::Registry
- default_gridsearch_par2_start :
BALL::QSAR::Registry
- default_gridsearch_recursion :
BALL::QSAR::Registry
- default_gridsearch_steps :
BALL::QSAR::Registry
- default_gridsearch_stepwidth :
BALL::QSAR::Registry
- default_hydrogen_target_nucleus_factor_ :
BALL::HaighMallionShiftProcessor
- default_k :
BALL::QSAR::Registry
- default_kernel_par1 :
BALL::QSAR::Registry
- default_kernel_par2 :
BALL::QSAR::Registry
- DEFAULT_LIBRARY :
BALL::RotamerLibrary
- default_lights_ :
BALL::VIEW::LightSettings
- default_nested_folds :
BALL::QSAR::Registry
- default_no_boostrap_samples :
BALL::QSAR::Registry
- default_no_opt_steps_ :
BALL::QSAR::Model
- default_no_permutations :
BALL::QSAR::Registry
- default_num_steps_ :
BALL::DNAMutator
- default_page_ :
BALL::VIEW::HelpViewer
- default_peak_ :
BALL::Experiment< PeakListType >
- DEFAULT_PROCESSOR :
BALL::Composite
- default_rbf_par :
BALL::QSAR::Registry
- default_standard_ :
BALL::FragmentDB
- DEFAULT_UNARY_PREDICATE :
BALL::Composite
- default_valdition_fraction :
BALL::QSAR::Registry
- default_value_ :
BALL::CubicSpline1D ,
BALL::CubicSpline2D
- default_values_ :
BALL::VIEW::PreferencesEntry
- default_visible_ :
BALL::VIEW::ModularWidget
- DEG_PER_RAD :
BALL::Constant
- DEG_PHI :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- DEG_PSI :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- DEG_THETA :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- degree_ :
BALL::PiecewisePolynomial
- DEGREE_INTERVAL :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- delegate_ :
BALL::VIEW::HotkeyTable
- deletable_ :
BALL::VIEW::Message
- delete_action_ :
BALL::VIEW::MainControl
- delete_buffer_ :
BALL::LogStream
- DELETE_EXISTING_BONDS :
BALL::BuildBondsProcessor::Option ,
BALL::BuildBondsProcessor::Default
- delete_force_field_ :
BALL::ForceFieldEvaluation
- delete_id_ :
BALL::VIEW::MolecularControl
- DELETE_OVERESTIMATED_BONDS :
BALL::BuildBondsProcessor::Option ,
BALL::BuildBondsProcessor::Default
- DELIMITER_TAG :
BALL::KCFFile
- DELTA :
BALL::GeneralizedBornModel::Option ,
BALL::GeneralizedBornModel::Default
- delta :
BALL::FragmentDB::BuildBondsProcessor::Connection
- delta_ :
BALL::GeneralizedBornModel::GBParameters ,
BALL::GeneralizedBornModel
- delta_r :
BALL::MMFF94StretchBend::Stretch
- delta_theta :
BALL::MMFF94StretchBend::Bend
- demo_action_ :
BALL::VIEW::DemoTutorialDialog
- demo_mode_ :
BALL::VIEW::DemoTutorialDialog
- density_ :
BALL::SurfaceProcessor ,
BALL::TriangulatedSAS ,
BALL::TriangulatedSES ,
BALL::TriangulatedSurface
- deposition_date :
BALL::PDB::RecordHEADER
- depth_ :
BALL::SmartsMatcher ,
BALL::UCK ,
BALL::TBox3< T >
- depth_vector_ :
BALL::TBox3< T >
- description :
BALL::VIEW::PubChemDialog::ParsedResult_ ,
BALL::VIEW::EditableScene::EditOperation
- descriptions_ :
BALL::VIEW::AssignBondOrderResultsDialog ,
BALL::VIEW::PubChemDialog
- descriptor_IDs_ :
BALL::QSAR::Model
- descriptor_matrix :
BALL::QSAR::RegressionValidation::BackupData
- descriptor_matrix_ :
BALL::QSAR::Model ,
BALL::QSAR::QSARData
- descriptor_names_ :
BALL::QSAR::Model
- descriptor_source_model :
BALL::QSAR::ModelConfiguration
- descriptor_transformations_ :
BALL::QSAR::Model ,
BALL::QSAR::QSARData
- deselect_action_ :
BALL::VIEW::MolecularControl
- deselect_id_ :
BALL::VIEW::MolecularControl
- desolv_ligand_ :
BALL::PolarSolvation
- desolv_protein_ :
BALL::PolarSolvation
- details :
BALL::NMRStarFile::Sample ,
BALL::NMRStarFile::MonomericPolymer ,
BALL::NMRStarFile::MolecularSystem::RelatedDB
- deviation_sigma_ :
BALL::CCP4File
- device_ :
BALL::VIEW::DeviceEvent
- dG_free :
BALL::CharmmEEF1::Values
- dG_free_ :
BALL::CharmmEEF1
- dG_ref :
BALL::CharmmEEF1::Values
- dG_ref_ :
BALL::CharmmEEF1
- dH_ref :
BALL::CharmmEEF1::Values
- dH_ref_ :
BALL::CharmmEEF1
- diagram_color_ :
BALL::VIEW::RegularData1DWidget ,
BALL::VIEW::RegularData2DWidget
- dialog_ :
BALL::VIEW::RegularData3DController ,
BALL::VIEW::TrajectoryController ,
BALL::VIEW::VectorGridController ,
BALL::VIEW::CalculateFDPBThread
- dictionary_type :
BALL::MOL2File::SubstructureStruct
- DIELECTRIC_SMOOTHING :
BALL::FDPB::Option ,
BALL::FDPB::Default
- diffuse_ :
BALL::VIEW::Stage
- dimension_ :
BALL::TRegularData1D< ValueType > ,
BALL::TRegularData2D< ValueType > ,
BALL::TRegularData3D< ValueType > ,
BALL::ShiftModel2D ,
BALL::ShiftModel1D
- dimension_x_ :
BALL::HashGrid3< Item >
- dimension_y_ :
BALL::HashGrid3< Item >
- dimension_z_ :
BALL::HashGrid3< Item >
- DIPOLE :
BALL::FDPB::Boundary
- dir_ :
BALL::Directory
- direction_ :
BALL::VIEW::LightSource ,
BALL::EnergyMinimizer
- directory_path_ :
BALL::Directory
- dirent_ :
BALL::Directory
- disable_output_ :
BALL::LogStream
- discretization_steps_ :
BALL::QSAR::NBModel
- discretizeFeatures :
BALL::QSAR::ClassificationModel
- discretizeTestDataFeatures :
BALL::QSAR::ClassificationModel
- display_lists_ :
BALL::VIEW::GLRenderer
- display_lists_index_ :
BALL::VIEW::GLRenderer
- DISPLAYLIST_NOT_DEFINED :
BALL::VIEW::GLDisplayList
- dist :
BALL::FragmentDB::BuildBondsProcessor::Connection
- distance_ :
BALL::VIEW::AtomDistanceColorProcessor
- distance_action_ :
BALL::VIEW::MolecularControl
- DISTANCE_DEPENDENT_DIELECTRIC :
BALL::CharmmFF::Default ,
BALL::MMFF94::Default ,
BALL::AmberFF::Option ,
BALL::AmberFF::Default ,
BALL::CharmmFF::Option ,
BALL::MMFF94::Option
- DISTANCE_TOLERANCE :
BALL::CHPI::Default ,
BALL::CHPI::Option
- distance_tolerance_ :
BALL::CHPI
- DNA_base_radius_ :
BALL::VIEW::AddCartoonModel
- DNA_helix_radius_ :
BALL::VIEW::AddCartoonModel
- DNA_ladder_radius_ :
BALL::VIEW::AddCartoonModel
- do_resize_ :
BALL::VIEW::RenderSetup
- dock_alg_ :
BALL::VIEW::DockingThread ,
BALL::VIEW::DockingController
- dock_dialog_ :
BALL::VIEW::DockingController
- dock_res_ :
BALL::VIEW::DockResultDialog
- dock_result_dialog_ :
BALL::VIEW::DockingController
- docked_system_ :
BALL::DockResult ,
BALL::VIEW::DockResultDialog
- docking_algorithm_ :
BALL::DockResult
- docking_options_ :
BALL::DockResult
- docking_partner1_ :
BALL::VIEW::DockDialog
- docking_partner2_ :
BALL::VIEW::DockDialog
- docu_entries_ :
BALL::VIEW::HelpViewer
- done :
BALL::QSAR::FeatureSelectionConfiguration ,
BALL::QSAR::ModelConfiguration ,
BALL::QSAR::ValidationConfiguration ,
BALL::QSAR::InputPartitioningConfiguration ,
BALL::QSAR::InputConfiguration ,
BALL::QSAR::PredictionConfiguration
- donor_ :
BALL::HBondProcessor::HBond
- donor_acceptor :
BALL::MMFF94VDWParameters::VDWEntry
- donor_is_hydrogen_ :
BALL::HBondProcessor::HBond
- donor_occupied_ :
BALL::HBondShiftProcessor
- donors_ :
BALL::HBondShiftProcessor ,
BALL::HBondProcessor
- dot_size_ :
BALL::VIEW::GridVisualisation
- double_bond :
BALL::Kekuliser::AtomInfo
- drag_ :
BALL::VIEW::SnapshotVisualisationDialog
- draw_box :
BALL::VIEW::GridVisualisation
- draw_DNA_as_ladder_ :
BALL::VIEW::AddCartoonModel
- draw_ribbon_ :
BALL::VIEW::AddCartoonModel
- drawed_mesh_ :
BALL::VIEW::GLRenderer
- drawed_other_object_ :
BALL::VIEW::GLRenderer
- drawing_mode_ :
BALL::VIEW::GLRenderer ,
BALL::VIEW::Representation
- drawing_precision_ :
BALL::VIEW::ModelProcessor ,
BALL::VIEW::Representation ,
BALL::VIEW::GLRenderer
- dual_stereo_action_ :
BALL::VIEW::Scene
- dual_stereo_different_display_action_ :
BALL::VIEW::Scene
- dummy_chain_ :
BALL::VIEW::ChainColorProcessor ,
BALL::VIEW::AddBackboneModel
- dummy_data_item_ :
BALL::CIFFile::SaveFrame ,
BALL::CIFFile::Datablock
- dummy_indices_ :
BALL::CIFFile::Datablock
- dummy_molecule_ :
BALL::SMARTSPredicate ,
BALL::VIEW::MoleculeColorProcessor
- dummy_monomeric_polymer_ :
BALL::NMRStarFile
- dummy_NMR_spectrometer_ :
BALL::NMRStarFile
- dummy_protein_ :
BALL::VIEW::AddBackboneModel
- dummy_residue :
BALL::VIEW::ResidueNameColorProcessor
- dummy_residue_ :
BALL::VIEW::ResidueNumberColorProcessor ,
BALL::VIEW::ResidueTypeColorProcessor
- dummy_sample_ :
BALL::NMRStarFile
- dummy_sample_condition_ :
BALL::NMRStarFile
- dummy_saveframe_ :
BALL::CIFFile::Datablock ,
BALL::NMRStarFile
- dummy_saveframes_ :
BALL::CIFFile::Datablock
- dummy_shift_reference_set_ :
BALL::NMRStarFile
- dummy_ss_ :
BALL::VIEW::AddBackboneModel ,
BALL::VIEW::SecondaryStructureColorProcessor
- dynamic_rule :
BALL::MOL2File::SetStruct
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