Here are the classes, structs, unions and
interfaces with brief descriptions:
| BALL::AddHydrogenProcessor |
|
| BALL::Addition<
First, Second, DataType > |
|
| BALL::AmberBend |
|
| BALL::AmberEvaluation |
|
| BALL::AmberFF |
|
| BALL::AmberFF::Default |
|
| BALL::AmberFF::Option |
|
| BALL::AmberNonBonded |
|
| BALL::AmberStretch |
|
| BALL::AmberTorsion |
|
|
BALL::AmberTorsion::SingleAmberTorsion |
|
| BALL::AnisotropyShiftProcessor |
|
| BALL::AntechamberFile |
|
| BALL::AromaticBondsPredicate |
|
| BALL::AromaticityProcessor |
This processor provides methods for
detection and assignment of aromaticity |
|
BALL::AromaticityProcessor::Default |
Default values for
options |
| BALL::AromaticityProcessor::Option |
Option names |
| BALL::AromaticRingStacking |
|
|
BALL::AromaticRingStacking::Default |
|
| BALL::AromaticRingStacking::Option |
|
| BALL::AssignBaseProcessor |
Only used for deriving
interface |
| BALL::AssignBondOrderProcessor |
Assignment of bond orders from
topology information |
|
BALL::AssignBondOrderProcessor::Algorithm |
|
|
BALL::AssignBondOrderProcessor::Default |
Default values for
options |
|
BALL::AssignBondOrderProcessor::Heuristic |
|
|
BALL::AssignBondOrderProcessor::Option |
Option names |
|
BALL::AssignBondOrderProcessor::PQ_Entry_ |
|
|
BALL::AssignBondOrderProcessor::Solution_ |
|
| BALL::AssignChargeProcessor |
|
| BALL::AssignRadiusProcessor |
|
| BALL::AssignTypeNameProcessor |
|
| BALL::AssignTypeProcessor |
|
| BALL::Atom |
|
| BALL::Atom::BondIteratorTraits |
|
| BALL::AtomBijection |
|
| BALL::AtomContainer |
|
| BALL::AtomContainerIteratorTraits |
|
| BALL::AtomicPolarizabilities |
|
| BALL::AtomInformationContent |
|
| BALL::AtomIteratorTraits |
|
| BALL::AtomNamePredicate |
|
| BALL::AtomTypePredicate |
|
| BALL::AtomTyper |
|
| BALL::AtomTypes |
|
| BALL::AtomVector |
|
| BALL::AutoDeletable |
|
| BALL::AxialPredicate |
|
| BALL::BackBonePredicate |
|
| BALL::BalabanIndexJ |
|
| BALL::BALLPlugin |
|
| BALL::BaseFilterIterator<
Predicate, IteratorBase > |
|
| BALL::BaseIterator<
Container, DataType, Position, Traits > |
|
| BALL::BendComponent |
|
| BALL::BidirectionalFilterIterator<
Predicate, IteratorBidirectional > |
Mutable bidirectional iterator |
| BALL::BidirectionalIterator<
Container, DataType, Position, Traits > |
Mutable bidirectional iterator |
| BALL::BinaryFileAdaptor<
T > |
|
| BALL::BinaryFunctor<
FirstArgumentType, SecondArgumentType, ResultType
> |
|
| BALL::BinaryPredicate<
T1, T2 > |
|
| BALL::BinaryProcessor<
T1, T2 > |
|
| BALL::BindingPocketProcessor |
|
|
BALL::BindingPocketProcessor::Default |
|
|
BALL::BindingPocketProcessor::Option |
|
|
BALL::BindingPocketProcessor::Sphere_ |
|
|
BALL::BindingPocketProcessor::SphereComparator_ |
|
| BALL::Bit |
|
| BALL::Bit::IllegalOperation |
|
| BALL::BitVector |
|
| BALL::Bond |
|
| BALL::Bond::NotBound |
|
| BALL::BondPolarizabilities |
|
| BALL::BoundingBoxProcessor |
|
| BALL::Bruker1DFile |
|
| BALL::Bruker2DFile |
|
| BALL::BuildBondsProcessor |
|
| BALL::BuildBondsProcessor::Default |
Default values for
options |
| BALL::BuildBondsProcessor::Option |
Option names |
| BALL::BuriedPolar |
|
| BALL::BuriedPolar::Default |
|
| BALL::BuriedPolar::Option |
|
| BALL::CanonicalMD |
|
| BALL::CanonicalMD::AuxFactors |
Helper class containing auxiliary
factors |
| BALL::CCP4File |
|
| BALL::Chain |
|
| BALL::ChainIteratorTraits |
|
| BALL::ChainPredicate |
|
| BALL::ChargePredicate |
|
| BALL::ChargeRuleProcessor |
|
| BALL::CharmmBend |
|
| BALL::CharmmEEF1 |
|
| BALL::CharmmEEF1::Data |
|
| BALL::CharmmEEF1::Values |
|
| BALL::CharmmFF |
|
| BALL::CharmmFF::Default |
|
| BALL::CharmmFF::Option |
|
| BALL::CharmmImproperTorsion |
|
| BALL::CharmmNonBonded |
|
| BALL::CharmmStretch |
|
| BALL::CharmmTorsion |
|
|
BALL::CharmmTorsion::SingleCharmmTorsion |
|
| BALL::ChemScoreMetal |
|
| BALL::CHPI |
|
| BALL::CHPI::AromaticRing |
|
| BALL::CHPI::CHGroup |
|
| BALL::CHPI::Default |
|
| BALL::CHPI::Option |
|
| BALL::CIFFile |
|
| BALL::CIFFile::Datablock |
|
| BALL::CIFFile::Datacontent |
|
| BALL::CIFFile::Item |
|
| BALL::CIFFile::SaveFrame |
|
| BALL::CIFFile::State |
|
| BALL::ClaverieParameter |
|
| BALL::ClearChargeProcessor |
|
| BALL::ClearRadiusProcessor |
|
| BALL::ClearShiftProcessor |
|
| BALL::Client |
|
| BALL::Client::InvalidClient |
|
| BALL::Client::NoPersistentObject |
|
| BALL::ColumnIteratorTraits<
valuetype, mtraits > |
|
| BALL::Comparator<
T > |
|
| BALL::ComposedEnergyProcessor |
|
| BALL::Composite |
|
|
BALL::Composite::AncestorIteratorTraits |
|
|
BALL::Composite::ChildCompositeIteratorTraits |
|
|
BALL::Composite::CompositeIteratorTraits |
|
| BALL::CompositeIteratorTraits |
|
| BALL::Conformation4C1Predicate |
|
| BALL::ConformationSet |
|
| BALL::ConjugateGradientMinimizer |
|
|
BALL::ConjugateGradientMinimizer::Default |
|
|
BALL::ConjugateGradientMinimizer::Option |
|
| BALL::ConnectedComponentsProcessor |
|
| BALL::ConnectedToPredicate |
|
| BALL::ConnectedToPredicate::CTPNode |
|
|
BALL::ConnectedToPredicate::CTPNode::greater_ |
|
| BALL::ConnectivityBase |
|
| BALL::Constant |
|
| BALL::ConstantFunction<
constant_template > |
|
|
BALL::ConstBidirectionalFilterIterator< Predicate,
IteratorBidirectional > |
|
| BALL::ConstBidirectionalIterator<
Container, DataType, Position, Traits > |
|
| BALL::ConstForwardFilterIterator<
Predicate, IteratorForward > |
|
| BALL::ConstForwardIterator<
Container, DataType, Position, Traits > |
|
| BALL::ConstRandomAccessFilterIterator<
Predicate, IteratorRandomAccess > |
|
| BALL::ConstRandomAccessIterator<
Container, DataType, Position, Traits > |
|
| BALL::ConstReverseIterator<
Container, DataType, Position, Traits > |
|
| BALL::CosineTorsion |
|
| BALL::CosineTorsion::Data |
|
| BALL::CosineTorsion::SingleData |
|
| BALL::CosineTorsion::SingleValues |
|
| BALL::CosineTorsion::Values |
|
| BALL::CreateSpectrumProcessor |
|
| BALL::CrystalGenerator |
|
| BALL::CrystalInfo |
|
| BALL::CrystalInfo::Default |
|
| BALL::CrystalInfo::Option |
|
| BALL::CubicFunction<
Function, DataType > |
|
| BALL::CubicSpline1D |
|
| BALL::CubicSpline2D |
|
| BALL::DCDFile |
|
| BALL::Density |
|
| BALL::Descriptor |
|
| BALL::DiagonalIteratorTraits<
valuetype, mtraits > |
|
| BALL::Directory |
|
| BALL::Division<
First, Second, DataType > |
|
| BALL::DNAMutator |
|
| BALL::DockingAlgorithm |
|
| BALL::DockResult |
|
| BALL::DockResult::Compare_ |
|
| BALL::DockResult::Scoring_ |
|
| BALL::DoubleBondsPredicate |
|
| BALL::DoubleTraits |
|
| BALL::DSN6File |
|
| BALL::EdgeItem<
Node, Edge > |
|
| BALL::EFShiftProcessor |
|
|
BALL::ElectrostaticPotentialCalculator |
|
|
BALL::ElectrostaticPotentialCalculator::Default |
|
|
BALL::ElectrostaticPotentialCalculator::Option |
|
| BALL::Element |
|
| BALL::ElementColumnIteratorTraits<
valuetype, mtraits > |
|
| BALL::ElementPredicate |
|
| BALL::ElementRowIteratorTraits<
valuetype, mtraits > |
|
| BALL::Embeddable |
|
| BALL::EmpiricalHSShiftProcessor |
|
|
BALL::EmpiricalHSShiftProcessor::Default |
Default values for
options |
|
BALL::EmpiricalHSShiftProcessor::Option |
Option names |
|
BALL::EmpiricalHSShiftProcessor::PropertiesForShift_ |
|
|
BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_ |
|
| BALL::EnergeticEvaluation |
|
| BALL::EnergyMinimizer |
|
| BALL::EnergyMinimizer::Default |
|
| BALL::EnergyMinimizer::Option |
|
| BALL::EnergyProcessor |
|
| BALL::Enumerator<
Container, SiteIterator, Variant > |
|
| BALL::Enumerator<
Container, SiteIterator, Variant
>::IteratorTraits_ |
|
| BALL::EnumeratorIndex |
|
|
BALL::EnumeratorIndex::IncompatibleIndex |
|
| BALL::Exception::BufferOverflow |
|
| BALL::Exception::CUDAError |
|
| BALL::Exception::DivisionByZero |
|
| BALL::Exception::FileNotFound |
|
| BALL::Exception::FormatUnsupported |
|
| BALL::Exception::GeneralException |
|
|
BALL::Exception::GlobalExceptionHandler |
|
| BALL::Exception::IllegalPosition |
|
|
BALL::Exception::IllegalSelfOperation |
|
|
BALL::Exception::IllegalTreeOperation |
|
|
BALL::Exception::IncompatibleIterators |
|
| BALL::Exception::IndexOverflow |
|
| BALL::Exception::IndexUnderflow |
|
| BALL::Exception::InvalidArgument |
|
| BALL::Exception::InvalidFormat |
|
| BALL::Exception::InvalidIterator |
|
| BALL::Exception::InvalidOption |
Exception to
be thrown if an invalid option is given |
| BALL::Exception::InvalidRange |
|
| BALL::Exception::InvalidSize |
|
|
BALL::Exception::MatrixHasWrongDimension |
|
| BALL::Exception::MatrixIsSingular |
|
| BALL::Exception::MatrixNotQuadratic |
|
| BALL::Exception::MatrixNotRegular |
|
| BALL::Exception::NoBufferAvailable |
|
| BALL::Exception::NotImplemented |
|
| BALL::Exception::NullPointer |
|
| BALL::Exception::OutOfGrid |
|
| BALL::Exception::OutOfMemory |
|
| BALL::Exception::OutOfRange |
|
| BALL::Exception::ParseError |
|
| BALL::Exception::Postcondition |
|
| BALL::Exception::Precondition |
|
| BALL::Exception::SingularIterator |
|
| BALL::Exception::SizeUnderflow |
|
| BALL::Exception::TooManyBonds |
Exception to
be thrown if too many bonds for one atom |
| BALL::Exception::TooManyErrors |
Exception to
be thrown if too many errors occur, e.g. in ForceField |
| BALL::Exception::Uninitialized |
|
|
BALL::Exception::VectorHasWrongDimension |
|
| BALL::Experiment<
PeakListType > |
|
| BALL::Expression |
|
| BALL::ExpressionParser |
|
| BALL::ExpressionParser::State |
|
| BALL::ExpressionParser::SyntaxTree |
|
| BALL::ExpressionPredicate |
|
| BALL::ExpressionTree |
|
| BALL::Factory< T
> |
|
| BALL::FalsePredicate |
|
| BALL::FDPB |
|
| BALL::FDPB::Boundary |
|
| BALL::FDPB::ChargeDistribution |
|
| BALL::FDPB::Default |
|
| BALL::FDPB::DielectricSmoothing |
|
| BALL::FDPB::FastAtomStruct |
|
| BALL::FDPB::Option |
|
| BALL::FermiBaseFunction |
|
| BALL::File |
|
| BALL::File::CannotWrite |
|
| BALL::FileSystem |
|
| BALL::FloatTraits |
|
| BALL::ForceField |
|
| BALL::ForceFieldComponent |
|
| BALL::ForceFieldEvaluation |
|
| BALL::ForceFieldParameters |
|
| BALL::FormalCharge |
|
| BALL::ForwardFilterIterator<
Predicate, IteratorForward > |
|
| BALL::ForwardIterator<
Container, DataType, Position, Traits > |
|
| BALL::Fragment |
|
| BALL::FragmentDB |
|
|
BALL::FragmentDB::BuildBondsProcessor |
|
|
BALL::FragmentDB::BuildBondsProcessor::Connection |
|
| BALL::FragmentDB::NoFragmentNode |
|
|
BALL::FragmentDB::NormalizeNamesProcessor |
|
| BALL::FragmentDistanceCollector |
|
| BALL::FragmentIteratorTraits |
|
| BALL::FresnoTypes |
|
| BALL::GAFFCESParser |
|
| BALL::GAFFCESParser::APSMatcher |
|
|
BALL::GAFFCESParser::APSMatcher::APSTerm |
|
|
BALL::GAFFCESParser::CESelementConnectionPredicate |
|
|
BALL::GAFFCESParser::CESelementPredicate |
|
| BALL::GAFFCESParser::CESPredicate |
|
|
BALL::GAFFCESParser::CESwildcardsConnectionPredicate |
|
|
BALL::GAFFCESParser::CESwildcardsPredicate |
|
| BALL::GAFFCESParser::State |
|
| BALL::GAFFCESParser::TruePredicate |
|
| BALL::GAFFTypeProcessor |
|
| BALL::GAFFTypeProcessor::Default |
|
| BALL::GAFFTypeProcessor::Option |
|
|
BALL::GAFFTypeProcessor::TypeDefinition |
Nested class definitions |
| BALL::GAMESSDatFile |
|
| BALL::GAMESSDatFile::block |
|
| BALL::GAMESSDatFile::State |
|
| BALL::GAMESSLogFile |
|
| BALL::GAMESSLogFile::State |
|
| BALL::GeneralizedBornModel |
|
|
BALL::GeneralizedBornModel::Default |
|
|
BALL::GeneralizedBornModel::GBParameters |
|
| BALL::GeneralizedBornModel::Option |
|
| BALL::GenericMolFile |
|
| BALL::GeometricCenterProcessor |
|
| BALL::GeometricFit |
|
| BALL::GeometricFit::Default |
|
| BALL::GeometricFit::Option |
|
| BALL::GeometricFit::Peak_ |
|
|
BALL::GeometricFit::RotationAngles_ |
|
| BALL::GlobalInitializer |
|
| BALL::Gradient |
|
| BALL::GraphEdge<
Vertex, Edge, Face > |
|
| BALL::GraphFace<
Vertex, Edge, Face > |
|
| BALL::GraphTriangle<
Vertex, Edge, Face > |
|
| BALL::GraphVertex<
Vertex, Edge, Face > |
|
| BALL::HaighMallionShiftProcessor |
|
| BALL::HashFunction<
T > |
|
| BALL::HashGrid3<
Item > |
|
| BALL::HashGrid3<
Item >::BoxIteratorTraits |
|
| BALL::HashGridBox3<
Item > |
|
|
BALL::HashGridBox3< Item
>::BoxIteratorTraits |
|
|
BALL::HashGridBox3< Item
>::DataIteratorTraits |
|
| BALL::HashMap< Key, T
> |
HashMap class based on the STL map (containing serveral
convenience functions) |
| BALL::HashMap<
Key, T >::IllegalKey |
HashMap illegal key exception |
| BALL::HashSet< Key
> |
|
| BALL::HashSet<
Key >::IllegalKey |
|
| BALL::HashSet<
Key >::IteratorTraits |
|
| BALL::HashSet<
Key >::Node |
|
| BALL::HBondProcessor |
Computation of hydrogen bonds from
topology information |
| BALL::HBondProcessor::Default |
Default values for
options |
| BALL::HBondProcessor::HBond |
|
| BALL::HBondProcessor::Option |
Option names |
|
BALL::HBondProcessor::PredictionMethod |
Default values for
options |
| BALL::HBondProcessor::ResidueData |
|
| BALL::HBondShiftProcessor |
|
| BALL::HINFile |
|
| BALL::HybridisationProcessor |
|
|
BALL::HybridisationProcessor::AtomNames_ |
|
|
BALL::HybridisationProcessor::Default |
Default values for
options |
|
BALL::HybridisationProcessor::Elements_ |
|
|
BALL::HybridisationProcessor::Method |
|
|
BALL::HybridisationProcessor::Option |
Option names |
| BALL::HydrogenBond |
|
| BALL::HydrogenBond::Default |
|
| BALL::HydrogenBond::Option |
|
| BALL::HydrophobicVdWSurface |
|
| BALL::INIFile |
|
| BALL::INIFile::IteratorTraits_ |
Interface for the LineIterator |
| BALL::INIFile::Section |
|
| BALL::InRingPredicate |
|
| BALL::JCAMPFile |
|
| BALL::JCAMPFile::JCAMPValue |
|
| BALL::JohnsonBoveyShiftProcessor |
|
|
BALL::JohnsonBoveyShiftProcessor::Ring |
|
| BALL::KCFFile |
|
| BALL::Kekuliser |
|
| BALL::Kekuliser::AtomInfo |
|
| BALL::KernelPredicate<
T > |
Kernel predicate class |
| BALL::LennardJones |
|
| BALL::LennardJones::Data |
|
| BALL::LennardJones::Values |
|
| BALL::Limits< T
> |
|
| BALL::Limits<
bool > |
|
| BALL::Limits<
char > |
|
| BALL::Limits<
double > |
|
| BALL::Limits<
float > |
|
| BALL::Limits<
int > |
|
| BALL::Limits<
long > |
|
| BALL::Limits<
short > |
|
| BALL::Limits<
signed char > |
|
| BALL::Limits<
unsigned char > |
|
| BALL::Limits<
unsigned int > |
|
| BALL::Limits<
unsigned long > |
|
|
BALL::Limits< unsigned short > |
|
| BALL::LinearBaseFunction |
|
| BALL::LineBasedFile |
|
| BALL::LineSearch |
|
| BALL::Lipophilic |
|
| BALL::Lipophilic::Default |
|
| BALL::Lipophilic::Option |
|
| BALL::List< Value
> |
|
| BALL::LogStream |
|
| BALL::LogStreamBuf |
|
| BALL::LogStreamBuf::LoglineStruct |
|
| BALL::LogStreamBuf::StreamStruct |
|
| BALL::LogStreamNotifier |
|
| BALL::LongDoubleTraits |
|
| BALL::LowerTriangularTraits |
|
| BALL::Mainframe |
|
| BALL::MeanAtomInformationContent |
|
| BALL::MicroCanonicalMD |
|
| BALL::MicroCanonicalMD::AuxFactors |
|
| BALL::MMFF94 |
|
| BALL::MMFF94::Default |
|
| BALL::MMFF94::Option |
|
| BALL::MMFF94AtomType |
Class to store the values of an atom
type from MMFFPROP.PAR |
| BALL::MMFF94AtomTypeEquivalences |
|
| BALL::MMFF94AtomTyper |
|
|
BALL::MMFF94AtomTyper::AromaticType |
|
| BALL::MMFF94AtomTypes |
|
| BALL::MMFF94BendParameters |
|
| BALL::MMFF94ChargeProcessor |
|
| BALL::MMFF94ESParameters |
|
| BALL::MMFF94NonBonded |
|
|
BALL::MMFF94NonBonded::NonBondedPairData |
|
| BALL::MMFF94OutOfPlaneBend |
|
|
BALL::MMFF94OutOfPlaneBend::OutOfPlaneBend |
|
| BALL::MMFF94ParametersBase |
|
| BALL::MMFF94PlaneParameters |
|
| BALL::MMFF94StretchBend |
|
| BALL::MMFF94StretchBend::Bend |
See MMFFANG.PAR |
| BALL::MMFF94StretchBend::Stretch |
|
|
BALL::MMFF94StretchBend::StretchBend |
|
| BALL::MMFF94StretchBendParameters |
|
| BALL::MMFF94StretchParameters |
|
|
BALL::MMFF94StretchParameters::BondData |
|
|
BALL::MMFF94StretchParameters::EmpiricalBondData |
|
| BALL::MMFF94Torsion |
|
| BALL::MMFF94Torsion::Torsion |
See MMFFTOR.PAR |
| BALL::MMFF94TorsionParameters |
|
| BALL::MMFF94VDWParameters |
|
|
BALL::MMFF94VDWParameters::VDWEntry |
|
| BALL::MOL2File |
|
| BALL::MOL2File::AtomStruct |
|
| BALL::MOL2File::BondStruct |
|
| BALL::MOL2File::CommentStruct |
|
| BALL::MOL2File::MoleculeStruct |
|
| BALL::MOL2File::SetStruct |
A class used for storing TRIPOS
sets |
| BALL::MOL2File::SubstructureStruct |
|
| BALL::MolecularDynamics |
|
| BALL::MolecularDynamics::Default |
|
| BALL::MolecularDynamics::Option |
|
| BALL::MolecularInformation |
|
| BALL::MolecularWeight |
|
| BALL::Molecule |
|
| BALL::MoleculeIteratorTraits |
|
| BALL::MoleculeObjectCreator |
|
| BALL::MoleculePredicate |
|
| BALL::MOLFile |
|
| BALL::MOLFile::AtomStruct |
|
| BALL::MOLFile::BondStruct |
|
| BALL::MOLFile::CountsStruct |
|
| BALL::MOLFile::Property |
|
| BALL::MolFileFactory |
|
| BALL::MPISupport |
|
| BALL::MutableConstant<
DataType > |
|
| BALL::MutablePower<
Function, DataType > |
|
| BALL::NamedProperty |
|
| BALL::NegativePolarVdWSurface |
|
| BALL::NegativeVdWSurface |
|
| BALL::NMRAtomData |
|
| BALL::NMRAtomDataSet |
|
| BALL::NMRStarFile |
This class provides methods for
reading and assigning chemical shifts |
| BALL::NMRStarFile::BALLToBMRBMapper |
|
| BALL::NMRStarFile::EntryInformation |
|
| BALL::NMRStarFile::MolecularSystem |
|
|
BALL::NMRStarFile::MolecularSystem::ChemicalUnit |
|
|
BALL::NMRStarFile::MolecularSystem::RelatedDB |
|
| BALL::NMRStarFile::MonomericPolymer |
|
|
BALL::NMRStarFile::MonomericPolymer::HomologDB |
Database with homolog entries |
| BALL::NMRStarFile::NMRAtomData |
|
| BALL::NMRStarFile::NMRAtomDataSet |
|
| BALL::NMRStarFile::NMRSpectrometer |
|
| BALL::NMRStarFile::Sample |
|
|
BALL::NMRStarFile::Sample::Component |
|
| BALL::NMRStarFile::SampleCondition |
|
|
BALL::NMRStarFile::ShiftReferenceElement |
|
|
BALL::NMRStarFile::ShiftReferenceSet |
|
| BALL::NodeItem<
Node, Edge > |
|
| BALL::NonpolarSolvation |
|
| BALL::NonpolarSolvation::Default |
|
| BALL::NonpolarSolvation::Option |
|
| BALL::NucleicAcid |
|
| BALL::NucleicAcidIteratorTraits |
|
| BALL::NucleicAcidPredicate |
|
| BALL::Nucleotide |
|
| BALL::NucleotideIteratorTraits |
|
| BALL::NucleotidePredicate |
|
| BALL::NumberOfAromaticAtoms |
|
| BALL::NumberOfAromaticBonds |
|
| BALL::NumberOfAtoms |
|
| BALL::NumberOfBonds |
|
| BALL::NumberOfBondsPredicate |
|
| BALL::NumberOfBoron |
|
| BALL::NumberOfBromine |
|
| BALL::NumberOfCarbon |
|
| BALL::NumberOfChlorine |
|
| BALL::NumberOfDoubleBonds |
|
| BALL::NumberOfFlourine |
|
| BALL::NumberOfHeavyAtoms |
|
| BALL::NumberOfHeavyBonds |
|
| BALL::NumberOfHydrogen |
|
| BALL::NumberOfHydrogenBondAcceptors |
|
| BALL::NumberOfHydrogenBondDonors |
|
| BALL::NumberOfHydrophobicAtoms |
|
| BALL::NumberOfIodine |
|
| BALL::NumberOfNitrogen |
|
| BALL::NumberOfOxygen |
|
| BALL::NumberOfPhosphorus |
|
| BALL::NumberOfRotatableBonds |
|
| BALL::NumberOfRotatableSingleBonds |
|
| BALL::NumberOfSingleBonds |
|
| BALL::NumberOfSulfur |
|
| BALL::NumberOfTripleBonds |
|
| BALL::NumericalIntegrator<
Function, DataType > |
|
| BALL::NumericalSAS |
|
| BALL::NumericalSAS::Default |
|
| BALL::NumericalSAS::Option |
|
| BALL::Object |
|
| BALL::ObjectCreator |
|
| BALL::Options |
|
|
BALL::Pair6_12InteractionEnergyProcessor |
|
|
BALL::Pair6_12InteractionEnergyProcessor::Default |
|
|
BALL::Pair6_12InteractionEnergyProcessor::Option |
|
| BALL::Pair6_12RDFIntegrator |
|
|
BALL::Pair6_12RDFIntegrator::Default |
|
|
BALL::Pair6_12RDFIntegrator::Option |
|
|
BALL::PairExpInteractionEnergyProcessor |
|
|
BALL::PairExpInteractionEnergyProcessor::Default |
|
|
BALL::PairExpInteractionEnergyProcessor::Option |
|
| BALL::PairExpRDFIntegrator |
|
|
BALL::PairExpRDFIntegrator::Default |
|
| BALL::PairExpRDFIntegrator::Option |
|
| BALL::Parameters |
|
| BALL::ParameterSection |
|
| BALL::ParsedFunction<
arg > |
|
| BALL::PartialChargeBase |
|
| BALL::PartialChargeProcessor |
|
| BALL::Path |
|
| BALL::PCMCavFreeEnergyProcessor |
|
|
BALL::PCMCavFreeEnergyProcessor::Default |
|
|
BALL::PCMCavFreeEnergyProcessor::Option |
|
| BALL::PDB::AdditionalAtomInfo |
|
| BALL::PDB::BookKeeping |
|
| BALL::PDB::RecordANISOU |
|
| BALL::PDB::RecordATOM |
|
| BALL::PDB::RecordAUTHOR |
|
| BALL::PDB::RecordCAVEAT |
|
| BALL::PDB::RecordCISPEP |
|
| BALL::PDB::RecordCOMPND |
|
| BALL::PDB::RecordCONECT |
|
| BALL::PDB::RecordCRYST1 |
|
|
BALL::PDB::RecordCRYST1::UnitCell |
|
| BALL::PDB::RecordDBREF |
|
|
BALL::PDB::RecordDBREF::EndingDatabaseSegment |
|
|
BALL::PDB::RecordDBREF::EndingSequence |
|
|
BALL::PDB::RecordDBREF::InitialDatabaseSegment |
|
|
BALL::PDB::RecordDBREF::InitialSequence |
|
| BALL::PDB::RecordEND |
|
| BALL::PDB::RecordENDMDL |
|
| BALL::PDB::RecordEXPDTA |
|
| BALL::PDB::RecordFORMUL |
|
| BALL::PDB::RecordFTNOTE |
|
| BALL::PDB::RecordHEADER |
|
| BALL::PDB::RecordHELIX |
|
| BALL::PDB::RecordHET |
|
| BALL::PDB::RecordHETATM |
|
| BALL::PDB::RecordHETNAM |
|
| BALL::PDB::RecordHETSYN |
|
| BALL::PDB::RecordHYDBND |
|
|
BALL::PDB::RecordHYDBND::HydrogenAtom |
|
|
BALL::PDB::RecordHYDBND::HydrogenPartnerAtom |
|
| BALL::PDB::RecordJRNL |
|
| BALL::PDB::RecordKEYWDS |
|
| BALL::PDB::RecordLINK |
|
|
BALL::PDB::RecordLINK::LinkPartner |
|
| BALL::PDB::RecordMASTER |
|
| BALL::PDB::RecordMODEL |
|
| BALL::PDB::RecordMODRES |
|
| BALL::PDB::RecordMTRIX1 |
|
| BALL::PDB::RecordMTRIX2 |
|
| BALL::PDB::RecordMTRIX3 |
|
| BALL::PDB::RecordOBSLTE |
|
| BALL::PDB::RecordORIGX1 |
|
| BALL::PDB::RecordORIGX2 |
|
| BALL::PDB::RecordORIGX3 |
|
| BALL::PDB::RecordREMARK |
|
| BALL::PDB::RecordREVDAT |
|
| BALL::PDB::RecordSCALE1 |
|
| BALL::PDB::RecordSCALE2 |
|
| BALL::PDB::RecordSCALE3 |
|
| BALL::PDB::RecordSEQADV |
|
| BALL::PDB::RecordSEQRES |
|
| BALL::PDB::RecordSHEET |
|
| BALL::PDB::RecordSIGATM |
|
| BALL::PDB::RecordSIGUIJ |
|
| BALL::PDB::RecordSITE |
|
| BALL::PDB::RecordSLTBRG |
|
|
BALL::PDB::RecordSLTBRG::PartnerAtom |
|
| BALL::PDB::RecordSOURCE |
|
| BALL::PDB::RecordSPRSDE |
|
| BALL::PDB::RecordSSBOND |
|
| BALL::PDB::RecordTER |
|
| BALL::PDB::RecordTITLE |
|
| BALL::PDB::RecordTURN |
|
| BALL::PDB::RecordTVECT |
|
| BALL::PDB::RecordTypeFormat |
|
| BALL::PDB::RecordUNKNOWN |
|
| BALL::PDB::Residue |
|
| BALL::PDB::Structure |
|
| BALL::PDB::Structure::AtomEntry |
|
|
BALL::PDB::Structure::ConectAtomList |
|
| BALL::PDB::Structure::NCSMatrix |
|
|
BALL::PDB::Structure::UnitCellInfo |
|
| BALL::PDBAtom |
|
| BALL::PDBAtomIteratorTraits |
|
| BALL::PDBFile |
|
| BALL::PDBFile::Default |
|
| BALL::PDBFile::Option |
|
| BALL::PDBInfo |
|
| BALL::PDBRecords |
|
| BALL::Peak< PositionType
> |
|
| BALL::PeakList< PT
> |
|
| BALL::Peptides::AminoAcidDescriptor |
|
| BALL::Peptides::NameConverter |
This class provides conversion of
atom names between naming schemata |
|
BALL::Peptides::NameConverter::Default |
Default values for
options |
|
BALL::Peptides::NameConverter::Option |
Option names |
| BALL::Peptides::PeptideBuilder |
|
| BALL::PeriodicBoundary |
|
| BALL::PeriodicBoundary::Default |
Default values |
| BALL::PeriodicBoundary::Option |
|
| BALL::PersistenceManager |
|
| BALL::PersistentObject |
|
| BALL::PiecewiseFunction |
|
| BALL::PiecewisePolynomial |
|
| BALL::PierottiCavFreeEnergyProcessor |
|
|
BALL::PierottiCavFreeEnergyProcessor::Default |
|
|
BALL::PierottiCavFreeEnergyProcessor::Option |
|
| BALL::PluginHandler |
|
| BALL::PluginManager |
|
| BALL::PolarSolvation |
|
| BALL::PolarSolvation::Default |
|
| BALL::PolarSolvation::Option |
|
| BALL::PolarVdWSurface |
|
| BALL::PositivePolarVdWSurface |
|
| BALL::PositiveVdWSurface |
|
| BALL::Potential1210 |
|
| BALL::Potential1210::Data |
|
| BALL::Potential1210::Values |
|
| BALL::PreciseTime |
|
| BALL::PreferencesObject |
|
| BALL::PrincipalMomentOfInertia |
|
| BALL::PrincipalMomentOfInertiaX |
|
| BALL::PrincipalMomentOfInertiaY |
|
| BALL::PrincipalMomentOfInertiaZ |
|
| BALL::Processor |
|
| BALL::Product< First,
Second, DataType > |
|
| BALL::PropertyManager |
|
| BALL::Protein |
|
| BALL::ProteinIteratorTraits |
|
| BALL::ProteinPredicate |
|
| BALL::PTE_ |
|
| BALL::PTE_::SymbolToElement |
|
| BALL::PyColorRGBAVector |
|
| BALL::PyCompositeList |
|
| BALL::PyDatasetVector |
|
| BALL::PyIndexList |
|
| BALL::PyInterpreter |
|
| BALL::QSAR::ALLModel |
|
| BALL::QSAR::BayesModel |
|
| BALL::QSAR::ClassificationModel |
|
|
BALL::QSAR::ClassificationValidation |
|
| BALL::QSAR::ConfigIO |
|
|
BALL::QSAR::Exception::ConfigurationReadingError |
|
|
BALL::QSAR::Exception::FeatureSelectionParameterError |
|
|
BALL::QSAR::Exception::InconsistentUsage |
|
|
BALL::QSAR::Exception::InvalidActivityID |
|
|
BALL::QSAR::Exception::KernelParameterError |
|
|
BALL::QSAR::Exception::ModelParameterError |
|
|
BALL::QSAR::Exception::NoPCAVariance |
|
|
BALL::QSAR::Exception::PropertyError |
|
|
BALL::QSAR::Exception::SingularMatrixError |
|
|
BALL::QSAR::Exception::TooManyPLSComponents |
|
|
BALL::QSAR::Exception::WrongDataType |
|
|
BALL::QSAR::Exception::WrongFileFormat |
|
| BALL::QSAR::FeatureSelection |
|
|
BALL::QSAR::FeatureSelectionConfiguration |
|
| BALL::QSAR::FitModel |
|
| BALL::QSAR::GPModel |
|
| BALL::QSAR::InputConfiguration |
|
|
BALL::QSAR::InputPartitioningConfiguration |
|
| BALL::QSAR::Kernel |
|
| BALL::QSAR::KernelModel |
|
| BALL::QSAR::KNNModel |
|
| BALL::QSAR::KPCRModel |
|
| BALL::QSAR::KPLSModel |
|
| BALL::QSAR::LatentVariableModel |
|
| BALL::QSAR::LDAModel |
|
| BALL::QSAR::LibsvmModel |
|
|
BALL::QSAR::LibsvmModel::svm_model |
|
| BALL::QSAR::LinearModel |
|
| BALL::QSAR::LogitModel |
|
| BALL::QSAR::MLRModel |
|
| BALL::QSAR::Model |
|
| BALL::QSAR::ModelConfiguration |
|
| BALL::QSAR::ModelFactory<
T > |
|
| BALL::QSAR::NBModel |
|
| BALL::QSAR::NonLinearModel |
|
| BALL::QSAR::OPLSModel |
|
| BALL::QSAR::PCRModel |
|
| BALL::QSAR::PLSModel |
|
|
BALL::QSAR::PredictionConfiguration |
|
| BALL::QSAR::QSARData |
|
| BALL::QSAR::Registry |
|
| BALL::QSAR::RegistryEntry |
|
| BALL::QSAR::RegressionModel |
|
| BALL::QSAR::RegressionValidation |
|
|
BALL::QSAR::RegressionValidation::BackupData |
|
| BALL::QSAR::RRModel |
|
| BALL::QSAR::SNBModel |
|
| BALL::QSAR::Statistics |
|
| BALL::QSAR::SVMModel |
|
| BALL::QSAR::SVRModel |
|
| BALL::QSAR::Validation |
|
|
BALL::QSAR::ValidationConfiguration |
|
| BALL::QuadraticAngleBend |
|
| BALL::QuadraticAngleBend::Data |
|
| BALL::QuadraticAngleBend::Values |
|
| BALL::QuadraticBondStretch |
|
| BALL::QuadraticBondStretch::Data |
|
| BALL::QuadraticBondStretch::Values |
|
| BALL::QuadraticImproperTorsion |
|
|
BALL::QuadraticImproperTorsion::Data |
|
|
BALL::QuadraticImproperTorsion::Values |
|
| BALL::Quadruple<
T1, T2, T3, T4 > |
|
| BALL::RadialDistributionFunction |
|
| BALL::RadiusRuleProcessor |
|
| BALL::RandomAccessFilterIterator<
Predicate, IteratorRandomAccess > |
|
| BALL::RandomAccessIterator<
Container, DataType, Position, Traits > |
|
| BALL::RandomCoilShiftProcessor |
|
| BALL::RandomEvaluation |
|
| BALL::RandomNumberGenerator |
|
| BALL::RDFIntegrator |
|
| BALL::RDFParameter |
|
| BALL::RDFSection |
|
| BALL::Reciprocal<
Function, DataType > |
|
| BALL::ReconstructFragmentProcessor |
|
| BALL::ReducedSurface |
|
| BALL::RegularExpression |
|
| BALL::ReissCavFreeEnergyProcessor |
|
|
BALL::ReissCavFreeEnergyProcessor::Default |
|
|
BALL::ReissCavFreeEnergyProcessor::Option |
|
| BALL::RelHydrophobicVdWSurface |
|
| BALL::RelNegativePartialCharge |
|
| BALL::RelNegativePolarVdWSurface |
|
| BALL::RelNegativeVdWSurface |
|
| BALL::RelNumberOfRotatableBonds |
|
| BALL::RelNumberOfRotatableSingleBonds |
|
| BALL::RelPolarVdWSurface |
|
| BALL::RelPositivePartialCharge |
|
| BALL::RelPositivePolarVdWSurface |
|
| BALL::RelPositiveVdWSurface |
|
| BALL::Residue |
|
| BALL::ResidueChecker |
|
| BALL::ResidueIDPredicate |
|
| BALL::ResidueIteratorTraits |
|
| BALL::ResiduePredicate |
|
| BALL::ResidueRotamerSet |
|
|
BALL::ResidueRotamerSet::RotamerProbabilityGreaterThan_ |
|
| BALL::ResidueTorsions |
|
| BALL::ResidueTorsions::Data |
|
| BALL::ResourceEntry |
|
|
BALL::ResourceEntry::IteratorTraits_ |
|
| BALL::ResourceFile |
|
| BALL::ReverseIterator<
Container, DataType, Position, Traits > |
|
| BALL::RingAnalyser |
Methods for the analysis of the
structure of ringsystems |
| BALL::RingAnalyser::Ring |
|
| BALL::RingFinder |
|
| BALL::RingPerceptionProcessor |
|
|
BALL::RingPerceptionProcessor::Default |
Default
options for the ring perception |
|
BALL::RingPerceptionProcessor::Option |
Option names |
|
BALL::RingPerceptionProcessor::PathMessage_ |
|
|
BALL::RingPerceptionProcessor::TNode_ |
|
| BALL::RMSDMinimizer |
|
|
BALL::RMSDMinimizer::IncompatibleCoordinateSets |
|
|
BALL::RMSDMinimizer::TooFewCoordinates |
|
| BALL::RombergIntegrator<
Function, DataType > |
|
| BALL::Rotamer |
|
| BALL::RotamerLibrary |
Rotamer Library
Class |
| BALL::RotationalEntropyLoss |
|
|
BALL::RotationalEntropyLoss::Default |
|
|
BALL::RotationalEntropyLoss::Option |
|
| BALL::RowIteratorTraits<
valuetype, mtraits > |
|
| BALL::RSComputer |
|
| BALL::RSComputer::ProbePosition |
|
| BALL::RSEdge |
|
| BALL::RSFace |
|
| BALL::RSVertex |
|
| BALL::RuleEvaluator |
|
| BALL::RuleProcessor |
|
| BALL::SampleCondition |
|
| BALL::SASEdge |
|
| BALL::SASFace |
|
| BALL::SASTriangulator |
|
| BALL::SASVertex |
|
| BALL::ScoringBaseFunction |
|
| BALL::ScoringComponent |
|
| BALL::ScoringFunction |
|
| BALL::ScoringFunction::Default |
|
| BALL::ScoringFunction::Option |
|
| BALL::ScoringTypes |
|
| BALL::SCWRLRotamerFile |
Reads Dunbrack/SCWRL rotamer library
files |
| BALL::SDFile |
|
| BALL::SDGenerator |
|
| BALL::SDGenerator::AtomComparator |
|
| BALL::SDGenerator::Default |
Default values for
options |
| BALL::SDGenerator::Option |
Option names |
| BALL::SecondaryStructure |
|
|
BALL::SecondaryStructureIteratorTraits |
|
| BALL::SecondaryStructurePredicate |
|
| BALL::SecondaryStructureProcessor |
Secondary structure extraction from
3D structure |
| BALL::Selectable |
|
| BALL::SelectedPredicate |
|
| BALL::Selector |
|
| BALL::SESComputer |
|
| BALL::SESEdge |
|
| BALL::SESFace |
|
| BALL::SESSingularityCleaner |
|
|
BALL::SESSingularityCleaner::ProbeIntersection |
|
| BALL::SESTriangulator |
|
| BALL::SESVertex |
|
| BALL::ShiftedLVMMMinimizer |
|
|
BALL::ShiftedLVMMMinimizer::Default |
|
| BALL::ShiftedLVMMMinimizer::Option |
|
| BALL::ShiftModel |
|
| BALL::ShiftModel1D |
|
| BALL::ShiftModel2D |
|
| BALL::ShiftModule |
|
| BALL::ShiftReferenceElement |
|
| BALL::ShiftReferenceSet |
|
| BALL::SimpleBase |
|
| BALL::SimpleDownloader |
|
|
BALL::SimpleDownloaderHelper::BasicHelper |
|
|
BALL::SimpleDownloaderHelper::DLArrayHelper |
|
|
BALL::SimpleDownloaderHelper::DLHelper |
|
|
BALL::SimpleDownloaderHelper::DLThread |
|
| BALL::SimpleExperiment1D |
|
| BALL::SingleBondsPredicate |
|
| BALL::SizeOfSSSR |
|
| BALL::SLICKEnergy |
|
| BALL::SLICKEnergy::Default |
|
| BALL::SLICKEnergy::Option |
|
| BALL::SLICKScore |
|
| BALL::SLICKScore::Default |
|
| BALL::SLICKScore::Option |
|
| BALL::SmartsMatcher |
|
| BALL::SmartsMatcher::RecStruct_ |
Wrapper class which is used as an
interface in the matching code to the pool |
|
BALL::SmartsMatcher::RecStructCore_ |
Core structure of the recursive
matching algorithm for the object pool |
|
BALL::SmartsMatcher::RecStructPool_ |
Class which does the pool operations
of the
RecStructCore_ pool |
| BALL::SmartsParser |
|
| BALL::SmartsParser::SPAtom |
Smarts Parser Atom class |
|
BALL::SmartsParser::SPAtom::Property |
Property
struct of smarts parser atom |
|
BALL::SmartsParser::SPAtom::PropertyValue |
Possible types of the
properties |
| BALL::SmartsParser::SPBond |
Bond representation of
the smarts parser |
| BALL::SmartsParser::SPEdge |
Edge representation of the smarts
parser graph |
| BALL::SmartsParser::SPNode |
Representation of a node in the
smarts parser graph |
| BALL::SmartsParser::State |
Parser state (used by the parser
itself) |
| BALL::SMARTSPredicate |
|
| BALL::SmilesParser |
|
| BALL::SmilesParser::SPAtom |
|
| BALL::SmilesParser::SPBond |
|
| BALL::SmilesParser::State |
|
| BALL::SnapShot |
|
| BALL::SnapShotManager |
|
| BALL::SnapShotManager::Default |
Local class for handling default
values for the options |
| BALL::SnapShotManager::Option |
Local class for handling
options |
| BALL::SolventAccessibleSurface |
|
| BALL::SolventAtomDescriptor |
|
| BALL::SolventDescriptor |
|
| BALL::SolventExcludedSurface |
|
| BALL::SolventParameter |
|
| BALL::SolventPredicate |
|
| BALL::SortedPosition2 |
|
| BALL::SortedPosition3 |
|
| BALL::Sp2HybridizedPredicate |
|
| BALL::Sp3HybridizedPredicate |
|
| BALL::Spectrum<
DataT, PeakT, PositionT > |
|
| BALL::SpHybridizedPredicate |
|
| BALL::SquareFunction<
Function, DataType > |
|
| BALL::StandardTraits |
|
| BALL::SteepestDescentMinimizer |
|
| BALL::StrangLBFGSMinimizer |
|
|
BALL::StrangLBFGSMinimizer::Default |
|
| BALL::StrangLBFGSMinimizer::Option |
|
| BALL::StretchComponent |
|
| BALL::String |
|
| BALL::StringHashMap<
Value > |
|
| BALL::StructureMapper |
|
| BALL::Substring |
|
| BALL::Substring::InvalidSubstring |
|
| BALL::Substring::UnboundSubstring |
|
| BALL::Subtraction<
First, Second, DataType > |
|
| BALL::SurfaceBase |
|
| BALL::SurfaceProcessor |
|
| BALL::SymmetricTraits |
|
| BALL::System |
|
| BALL::TAngle< T
> |
|
| BALL::TBox3< T
> |
|
| BALL::TCircle3< T
> |
|
| BALL::TContour< T
> |
|
| BALL::TContourLine<
T > |
|
| BALL::TContourSurface<
T > |
|
| BALL::TContourSurface<
T >::Cube |
|
| BALL::TCPIOStream |
|
| BALL::TCPServer |
|
| BALL::TCPServerThread |
|
| BALL::Templates |
|
| BALL::TextPersistenceManager |
|
| BALL::TFFT1D<
ComplexTraits > |
|
| BALL::TFFT2D<
ComplexTraits > |
|
| BALL::TFFT3D<
ComplexTraits > |
|
| BALL::Timer |
|
| BALL::TimeStamp |
|
| BALL::TLine3< T
> |
|
| BALL::TMatrix4x4<
T > |
|
| BALL::TMolecularGraph<
Node, Edge > |
|
| BALL::TMutex<
MutexType > |
|
| BALL::TMutex<
QMutex > |
|
| BALL::TMutexLocker<
MutexLockerType, MutexType > |
|
| BALL::TotalNegativePartialCharge |
|
| BALL::TotalPositivePartialCharge |
|
| BALL::TPlane3< T
> |
|
| BALL::TQuaternion<
T > |
|
| BALL::TrajectoryFile |
|
| BALL::TransformationManager |
|
| BALL::TransformationProcessor |
|
| BALL::TranslationProcessor |
|
| BALL::TReadLocker<
ReadLockerType, ReadWriteLockType > |
|
| BALL::TReadWriteLock<
ReadWriteLockType > |
|
|
BALL::TReadWriteLock< QReadWriteLock > |
|
| BALL::TRegularData1D<
ValueType > |
|
|
BALL::TRegularData1D< ValueType
>::BlockValueType |
The block data type for reading and
writing binary data |
| BALL::TRegularData2D<
ValueType > |
|
|
BALL::TRegularData2D< ValueType
>::BlockValueType |
The block data type for reading and
writing binary data |
| BALL::TRegularData2D<
ValueType >::IndexType |
The index type used to refer to a
specific element in the grid (x-, and y-index) |
| BALL::TRegularData3D<
ValueType > |
|
|
BALL::TRegularData3D< ValueType
>::BlockValueType |
The block data type for reading and
writing binary data |
| BALL::TRegularData3D<
ValueType >::IndexType |
The index type used to refer to a
specific element in the grid (x-, y-, and z-index) |
| BALL::Triangle |
|
| BALL::TriangleEdge |
|
| BALL::TrianglePoint |
|
| BALL::TriangulatedSAS |
|
| BALL::TriangulatedSES |
|
| BALL::TriangulatedSphere |
|
| BALL::TriangulatedSphere::Face |
|
| BALL::TriangulatedSurface |
|
| BALL::Triple< T1, T2,
T3 > |
|
| BALL::TripleBondsPredicate |
|
| BALL::TRRFile |
|
| BALL::TRRFile::TRRHeader |
|
| BALL::TruePredicate |
|
| BALL::TSimpleBox3<
T > |
|
| BALL::TSphere3< T
> |
|
| BALL::TSurface< T
> |
|
| BALL::TSurface<
T >::Triangle |
|
| BALL::TVector2< T
> |
|
| BALL::TVector3< T
> |
|
| BALL::TVector4< T
> |
|
| BALL::TWriteLocker<
WriteLockerType, ReadWriteLockType > |
|
| BALL::TypenameRuleProcessor |
|
| BALL::TypeRuleProcessor |
|
| BALL::UCK |
|
| BALL::UhligCavFreeEnergyProcessor |
|
|
BALL::UhligCavFreeEnergyProcessor::Default |
|
|
BALL::UhligCavFreeEnergyProcessor::Option |
|
| BALL::UnaryFunctor<
ArgumentType, ResultType > |
|
| BALL::UnaryPredicate<
T > |
|
| BALL::UnaryProcessor<
T > |
|
| BALL::UpperTriangularTraits |
|
| BALL::VanDerWaals |
|
| BALL::VanDerWaals::Default |
|
| BALL::VanDerWaals::Option |
|
| BALL::VdWSurface |
|
| BALL::VdWVolume |
|
| BALL::VectorIteratorTraits<
valuetype > |
|
| BALL::VersionInfo |
|
| BALL::VertexAdjacency |
|
| BALL::VertexAdjacencyEquality |
|
| BALL::VIEW::AddBackboneModel |
|
|
BALL::VIEW::AddBackboneModel::ModelPart |
|
| BALL::VIEW::AddBallAndStickModel |
|
| BALL::VIEW::AddCartoonModel |
|
| BALL::VIEW::AddLineModel |
|
| BALL::VIEW::AddSurfaceModel |
|
| BALL::VIEW::AddVanDerWaalsModel |
|
|
BALL::VIEW::AmberConfigurationDialog |
|
| BALL::VIEW::AnimationThread |
|
|
BALL::VIEW::AssignBondOrderConfigurationDialog |
|
|
BALL::VIEW::AssignBondOrderResultsDialog |
|
|
BALL::VIEW::AtomBondModelBaseProcessor |
|
|
BALL::VIEW::AtomChargeColorProcessor |
|
|
BALL::VIEW::AtomDistanceColorProcessor |
|
| BALL::VIEW::AtomOverview |
|
|
BALL::VIEW::AtomOverview::ApplyProcessor |
|
|
BALL::VIEW::AtomOverview::OverviewProcessor |
|
| BALL::VIEW::BALLThread |
|
| BALL::VIEW::BondProperties |
|
| BALL::VIEW::Box |
|
| BALL::VIEW::BufferedRenderer |
|
| BALL::VIEW::ButtonEvent |
|
| BALL::VIEW::CalculateFDPBThread |
|
| BALL::VIEW::Camera |
|
| BALL::VIEW::CanvasWidget |
|
|
BALL::VIEW::CanvasWidget::PixmapItem |
|
| BALL::VIEW::ChainColorProcessor |
|
| BALL::VIEW::ChannelFormat |
|
|
BALL::VIEW::CharmmConfigurationDialog |
|
| BALL::VIEW::ClippingDialog |
|
| BALL::VIEW::ClippingPlane |
|
| BALL::VIEW::ColorButton |
|
| BALL::VIEW::ColorExtension2 |
|
| BALL::VIEW::ColorHSV |
|
| BALL::VIEW::ColoringSettingsDialog |
|
| BALL::VIEW::ColorMap |
|
| BALL::VIEW::ColorProcessor |
|
| BALL::VIEW::ColorRGBA |
|
| BALL::VIEW::ColorTable |
|
| BALL::VIEW::ColorUnit |
|
|
BALL::VIEW::ColorUnit::NotInHexFormat |
|
| BALL::VIEW::ColorUnitHue |
|
| BALL::VIEW::ComboBoxDelegate |
|
| BALL::VIEW::CompositeManager |
|
| BALL::VIEW::CompositeMessage |
|
| BALL::VIEW::CompositeProperties |
|
| BALL::VIEW::ConnectionObject |
|
| BALL::VIEW::ContourSurfaceDialog |
|
| BALL::VIEW::ControlSelectionMessage |
|
|
BALL::VIEW::CreateRepresentationMessage |
|
| BALL::VIEW::CustomColorProcessor |
|
| BALL::VIEW::Dataset |
|
| BALL::VIEW::DatasetControl |
|
| BALL::VIEW::DatasetController |
|
| BALL::VIEW::DatasetMessage |
|
| BALL::VIEW::DemoTutorialDialog |
|
| BALL::VIEW::DeselectControlsMessage |
|
| BALL::VIEW::DeviceEvent |
|
| BALL::VIEW::Disc |
|
| BALL::VIEW::DisplayProperties |
|
|
BALL::VIEW::DockableRegularData1DWidget |
|
|
BALL::VIEW::DockableRegularData2DWidget |
|
| BALL::VIEW::DockDialog |
|
| BALL::VIEW::DockingController |
|
| BALL::VIEW::DockingFinishedMessage |
Message to
notify docking has finished |
| BALL::VIEW::DockingThread |
Thread for Docking |
| BALL::VIEW::DockProgressDialog |
|
| BALL::VIEW::DockResultController |
|
| BALL::VIEW::DockResultDialog |
|
|
BALL::VIEW::DockResultDialog::Compare_ |
|
| BALL::VIEW::DockWidget |
|
| BALL::VIEW::DownloadElectronDensity |
|
| BALL::VIEW::DownloadPDBFile |
|
| BALL::VIEW::DragLogView |
|
| BALL::VIEW::EditableScene |
|
|
BALL::VIEW::EditableScene::EditOperation |
|
| BALL::VIEW::EditFunctions |
|
| BALL::VIEW::EditOperationDialog |
|
| BALL::VIEW::EditSettings |
|
| BALL::VIEW::EditSingleShortcut |
|
| BALL::VIEW::ElementColorProcessor |
|
| BALL::VIEW::EnergyMinimizerThread |
Thread for EnergyMinimization |
| BALL::VIEW::ExportGeometryDialog |
|
| BALL::VIEW::FakeDriver |
|
| BALL::VIEW::FDPBDialog |
|
| BALL::VIEW::FieldLineCreator |
|
| BALL::VIEW::FieldLinesDialog |
|
| BALL::VIEW::FileObserver |
|
|
BALL::VIEW::FinishedSimulationMessage |
|
| BALL::VIEW::ForceColorProcessor |
|
| BALL::VIEW::ForceModel |
|
| BALL::VIEW::FrameBuffer |
|
| BALL::VIEW::FrameBufferFormat |
|
| BALL::VIEW::GenericControl |
|
| BALL::VIEW::GenericSelectionMessage |
|
| BALL::VIEW::GeometricControl |
|
| BALL::VIEW::GeometricFitDialog |
|
| BALL::VIEW::GeometricObject |
|
|
BALL::VIEW::GeometricObjectSelectionMessage |
|
| BALL::VIEW::GLDisplayList |
|
|
BALL::VIEW::GLDisplayList::DisplayListRedeclaration |
|
|
BALL::VIEW::GLDisplayList::NestedDisplayList |
|
|
BALL::VIEW::GLDisplayList::NoDisplayListAvailable |
|
| BALL::VIEW::GLOffscreenTarget |
|
| BALL::VIEW::GLRenderer |
|
|
BALL::VIEW::GLRenderer::WrongModes |
|
| BALL::VIEW::GLRenderWindow |
|
| BALL::VIEW::GridColorWidget |
|
| BALL::VIEW::GridVisualisation |
|
| BALL::VIEW::GridVisualizationDialog |
|
| BALL::VIEW::HBondModelProcessor |
|
| BALL::VIEW::HeadTrackingEvent |
|
| BALL::VIEW::HelpViewer |
|
| BALL::VIEW::Hotkey |
|
| BALL::VIEW::HotkeyTable |
|
| BALL::VIEW::IconLoader |
|
| BALL::VIEW::InputDeviceDriver |
|
| BALL::VIEW::InputDevPluginHandler |
|
| BALL::VIEW::InputPlugin |
|
|
BALL::VIEW::InterpolateColorProcessor |
|
| BALL::VIEW::Label |
|
| BALL::VIEW::LabelDialog |
|
| BALL::VIEW::LabelModel |
|
| BALL::VIEW::LightSettings |
|
| BALL::VIEW::LightSource |
|
| BALL::VIEW::Line |
|
| BALL::VIEW::LogEvent |
Event class used for thread safe
output to logview |
| BALL::VIEW::LogView |
|
| BALL::VIEW::MainControl |
|
| BALL::VIEW::MainControlPreferences |
|
| BALL::VIEW::MaterialSettings |
|
| BALL::VIEW::MDSimulationThread |
Thread for MDSimulation |
| BALL::VIEW::Mesh |
|
| BALL::VIEW::MeshBuffer |
|
| BALL::VIEW::Message |
|
| BALL::VIEW::MessageEvent |
|
| BALL::VIEW::MinimizationDialog |
|
|
BALL::VIEW::MMFF94ConfigurationDialog |
|
| BALL::VIEW::ModelInformation |
|
| BALL::VIEW::ModelProcessor |
|
| BALL::VIEW::ModelSettingsDialog |
|
|
BALL::VIEW::ModifyRepresentationDialog |
|
| BALL::VIEW::ModularWidget |
|
| BALL::VIEW::MolecularControl |
|
|
BALL::VIEW::MolecularControl::MyTreeWidgetItem |
|
| BALL::VIEW::MolecularDynamicsDialog |
|
| BALL::VIEW::MolecularFileDialog |
|
| BALL::VIEW::MolecularStructure |
|
| BALL::VIEW::MolecularTaskMessage |
|
| BALL::VIEW::MoleculeColorProcessor |
|
| BALL::VIEW::MotionTrackingEvent |
|
| BALL::VIEW::MultiColorExtension |
|
| BALL::VIEW::MultiLine |
|
| BALL::VIEW::MyTextBrowser |
|
| BALL::VIEW::NetworkPreferences |
|
| BALL::VIEW::NewSelectionMessage |
|
| BALL::VIEW::OccupancyColorProcessor |
|
| BALL::VIEW::OpenBruker1DFile |
|
| BALL::VIEW::OpenBruker2DFile |
|
| BALL::VIEW::OpenSavePreferences |
|
| BALL::VIEW::ParsedFunctionDialog |
|
| BALL::VIEW::PeptideDialog |
|
| BALL::VIEW::PixelFormat |
|
| BALL::VIEW::PluginDialog |
|
| BALL::VIEW::PluginModel |
|
| BALL::VIEW::Point |
|
| BALL::VIEW::PositionColorProcessor |
|
| BALL::VIEW::POVRenderer |
|
|
BALL::VIEW::POVRenderer::POVRendererClippingPlane |
|
| BALL::VIEW::Preferences |
|
| BALL::VIEW::PreferencesEntry |
|
|
BALL::VIEW::PreferencesEntry::ExtendedPreferencesObject |
|
| BALL::VIEW::PTEDialog |
|
| BALL::VIEW::PubChemDialog |
|
|
BALL::VIEW::PubChemDialog::ParsedResult_ |
|
| BALL::VIEW::PythonHighlighter |
|
| BALL::VIEW::PythonSettings |
|
| BALL::VIEW::PythonValidator |
|
| BALL::VIEW::PyWidget |
|
| BALL::VIEW::PyWidget::MyLineEdit |
|
| BALL::VIEW::PyWidget::MyTextEdit |
|
| BALL::VIEW::QuadMesh |
|
| BALL::VIEW::QuadMesh::Quadruple |
|
|
BALL::VIEW::RaytraceableContourSurfaceDialog |
|
| BALL::VIEW::RaytraceableGrid |
|
|
BALL::VIEW::RaytraceableGridController |
|
|
BALL::VIEW::RegisterHelpSystemMessage |
|
| BALL::VIEW::RegularData1DWidget |
|
| BALL::VIEW::RegularData2DWidget |
|
| BALL::VIEW::RegularData3DController |
|
| BALL::VIEW::Renderer |
|
| BALL::VIEW::RenderSetup |
|
| BALL::VIEW::RenderTarget |
|
| BALL::VIEW::RenderWindow<
taPixelDatatype > |
|
| BALL::VIEW::Representation |
|
| BALL::VIEW::RepresentationManager |
|
| BALL::VIEW::RepresentationMessage |
Base class for all messages
concerning a Representation |
|
BALL::VIEW::ResidueNameColorProcessor |
|
|
BALL::VIEW::ResidueNumberColorProcessor |
|
|
BALL::VIEW::ResidueTypeColorProcessor |
|
| BALL::VIEW::Resolution |
|
| BALL::VIEW::RunGAMESSDialog |
|
| BALL::VIEW::RunPythonThread |
|
| BALL::VIEW::Scene |
|
| BALL::VIEW::SceneMessage |
|
| BALL::VIEW::SDWidget |
|
| BALL::VIEW::SDWidget::Default |
Default values for
options |
| BALL::VIEW::SDWidget::Option |
Option names |
|
BALL::VIEW::SecondaryStructureColorProcessor |
|
| BALL::VIEW::ServerPreferences |
|
| BALL::VIEW::ServerWidget |
|
|
BALL::VIEW::ServerWidget::BALLViewServer |
|
|
BALL::VIEW::ServerWidget::NotCompositeObject |
|
| BALL::VIEW::SetCamera |
|
| BALL::VIEW::SetClippingPlane |
|
| BALL::VIEW::ShortcutDialog |
|
| BALL::VIEW::ShortcutRegistry |
|
| BALL::VIEW::ShortcutTableModel |
|
| BALL::VIEW::ShortcutTableView |
|
|
BALL::VIEW::ShowDisplayPropertiesMessage |
|
| BALL::VIEW::ShowHelpMessage |
|
| BALL::VIEW::SimpleBox |
|
| BALL::VIEW::SimulationThread |
|
|
BALL::VIEW::SnapshotManagerInterface |
|
|
BALL::VIEW::SnapshotVisualisationDialog |
|
| BALL::VIEW::Sphere |
|
| BALL::VIEW::Stage |
|
|
BALL::VIEW::Stage::RaytracingMaterial |
|
| BALL::VIEW::StageSettings |
|
| BALL::VIEW::StereoSettingsDialog |
|
| BALL::VIEW::STLRenderer |
|
|
BALL::VIEW::SyncClippingPlanesMessage |
|
|
BALL::VIEW::TemperatureFactorColorProcessor |
|
| BALL::VIEW::TestFramework |
|
|
BALL::VIEW::TestFramework::MyEventThread |
|
|
BALL::VIEW::TestFramework::MyMouseEvent |
|
| BALL::VIEW::TilingRenderer |
|
| BALL::VIEW::TrajectoryController |
|
| BALL::VIEW::TransformationEvent6D |
|
| BALL::VIEW::TransformationMessage |
|
| BALL::VIEW::TreeWidget |
|
| BALL::VIEW::Tube |
|
| BALL::VIEW::TwoColoredLine |
|
| BALL::VIEW::TwoColoredTube |
|
| BALL::VIEW::UndoManagerDialog |
|
|
BALL::VIEW::UpdateRepresentationThread |
|
| BALL::VIEW::VectorGridController |
|
| BALL::VIEW::Vertex |
|
| BALL::VIEW::Vertex2 |
|
| BALL::VIEW::VIEWPlugin |
|
| BALL::VIEW::VRMLRenderer |
|
| BALL::Visitor< Host
> |
|
| BALL::XDRPersistenceManager |
|
| BALL::XYZFile |
|
| BALL::ZagrebIndex |
|
|
iostream |
|
| BALL_DEFAULT_MUTEX_TYPE |
|
| BALL_MAP_NAME |
|
| quaternion |
|
| hash<
BALL::SortedPosition2 > |
|
| hash<
BALL::SortedPosition3 > |
|
| MutexLockerType |
|
| QAbstractListModel |
|
| QAbstractTableModel |
|
| QCanvasRectangle |
|
| QCanvasView |
|
| QDialog |
|
| QDockWidget |
|
| QEvent |
|
| QGLWidget |
|
| QItemDelegate |
|
| QLineEdit |
|
| QMainWindow |
|
| QMouseEvent |
|
| QObject |
|
| QPaintDevice |
|
| QPushButton |
|
| QSyntaxHighlighter |
|
| QTableView |
|
| QTableWidget |
|
| QTextBrowser |
|
| QTextEdit |
|
| QThread |
|
| QTreeWidget |
|
| QTreeWidgetItem |
|
| QValidator |
|
| QWidget |
|
| ReadLockerType |
|
| ReadWriteLockType |
|
| binary_function |
|
| streambuf |
|
| unary_function |
|
| Ui::AboutDialog |
|
| Ui::AmberConfigurationDialogData |
|
| Ui::AtomOverviewData |
|
| Ui::BondPropertiesData |
|
| Ui::CharmmConfigurationDialogData |
|
| Ui::ClippingDialogData |
|
| Ui::ColoringSettingsDialogData |
|
| Ui::CompositePropertiesData |
|
| Ui::ContourSurfaceDialogData |
|
| Ui::DemoTutorialDialogData |
|
| Ui::DisplayPropertiesData |
|
| Ui::DockDialogData |
|
| Ui::DockProgressDialogData |
|
| Ui::DockResultDialogData |
|
| Ui::DownloadPDBFileData |
|
| Ui::EditSettingsData |
|
| Ui::FDPBDialogData |
|
| Ui::FieldLinesDialogData |
|
| Ui::GeometricFitDialogData |
|
| Ui::GridVisualizationDialogData |
|
| Ui::LabelDialogData |
|
| Ui::LightSettingsData |
|
| Ui::MainControlPreferencesData |
|
| Ui::MaterialSettingsData |
|
| Ui::MinimizationDialogData |
|
| Ui::MMFF94ConfigurationDialogData |
|
| Ui::ModelSettingsDialogData |
|
| Ui::ModifyRepresentationDialogData |
|
| Ui::MolecularDynamicsDialogData |
|
| Ui::NetworkPreferencesData |
|
| Ui::ParsedFunctionDialogData |
|
| Ui::PeptideDialogData |
|
| Ui::PreferencesData |
|
| Ui::PTEDialogData |
|
| Ui::PubChemDialogData |
|
| Ui::PythonSettingsData |
|
| Ui::SetCameraData |
|
| Ui::SetClippingData |
|
| Ui::SnapshotVisualisationDialogData |
|
| Ui::StageSettingsData |
|
| WriteLockerType |
|
