- B :
BALL::LennardJones::Values ,
BALL::Potential1210::Values
- b :
BALL::PDB::Structure::UnitCellInfo ,
BALL::SortedPosition3 ,
BALL::TSimpleBox3< T > ,
BALL::PDB::RecordCRYST1::UnitCell ,
BALL::BindingPocketProcessor::Sphere_ ,
BALL::SortedPosition2
- B64Chars_ :
BALL::String
- b_ :
BALL::FermiBaseFunction
- B_ :
BALL::LennardJones ,
BALL::Potential1210 ,
BALL::Pair6_12RDFIntegrator ,
BALL::StructureMapper
- b_count :
BALL::BindingPocketProcessor::Sphere_
- b_i_ :
BALL::ConjugateGradientMinimizer
- backbone_ :
BALL::VIEW::AddBackboneModel
- backbone_dependent_ :
BALL::RotamerLibrary
- backbone_h_bond_pairs_ :
BALL::HBondProcessor
- background_color_ :
BALL::VIEW::Stage ,
BALL::VIEW::RegularData1DWidget ,
BALL::VIEW::RegularData2DWidget
- backup_ :
BALL::VIEW::DockDialog ,
BALL::VIEW::GeometricFitDialog
- backup_data_ :
BALL::QSAR::RegressionValidation
- backup_path_ :
BALL::Directory
- backward_ :
BALL::VIEW::MyTextBrowser
- ball_and_stick_ :
BALL::VIEW::AddBallAndStickModel
- BALL_keywords :
BALL::VIEW::PythonHighlighter
- BALL_patterns :
BALL::VIEW::PythonHighlighter
- ball_radius_ :
BALL::VIEW::AddBallAndStickModel
- ball_to_bmrb_map_ :
BALL::NMRStarFile::BALLToBMRBMapper
- base_dir_ :
BALL::VIEW::HelpViewer
- base_function_ :
BALL::ScoringFunction
- BASE_FUNCTION_TYPE :
BALL::ScoringFunction::Option ,
BALL::ScoringFunction::Default
- base_multipliers_ :
BALL::EnumeratorIndex
- base_size_ :
BALL::VIEW::ForceModel
- bases_ :
BALL::DNAMutator
- basestats :
BALL::VIEW::ExportGeometryDialog
- basic_color_ :
BALL::VIEW::ResidueTypeColorProcessor
- basis_options_ :
BALL::GAMESSLogFile
- basis_size :
BALL::GAMESSLogFile
- BATH_RELAXATION_TIME :
BALL::MolecularDynamics::Option ,
BALL::MolecularDynamics::Default
- bath_relaxation_time_ :
BALL::CanonicalMD
- bb_dep_sets_ :
BALL::RotamerLibrary
- bb_indep_sets_ :
BALL::RotamerLibrary
- BC_grid_ :
BALL::BindingPocketProcessor
- BC_threshold_ :
BALL::BindingPocketProcessor
- BCC_ :
BALL::RingPerceptionProcessor
- beeing_rendered_ :
BALL::VIEW::RepresentationManager
- beeing_updated_ :
BALL::VIEW::RepresentationManager
- beep :
BALL::RingPerceptionProcessor::PathMessage_
- bend_ :
BALL::BendComponent
- bend_c_ :
BALL::MMFF94StretchBend
- bend_elements_ :
BALL::MMFF94StretchBend
- bend_enabled_ :
BALL::MMFF94StretchBend
- bend_energy_ :
BALL::MMFF94StretchBend
- bend_index :
BALL::MMFF94StretchBend::StretchBend
- bend_parameters_ :
BALL::BendComponent ,
BALL::MMFF94StretchBend
- bend_z_ :
BALL::MMFF94StretchBend
- bends_ :
BALL::MMFF94OutOfPlaneBend ,
BALL::MMFF94StretchBend
- BEST_NUM :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- beta :
BALL::PDB::RecordCRYST1::UnitCell ,
BALL::PDB::Structure::UnitCellInfo
- beta_ :
BALL::CCP4File ,
BALL::DSN6File ,
BALL::LineSearch ,
BALL::CrystalInfo
- BETWEEN_PLUGINDIR_SEPERATOR :
BALL::PluginManager
- BETWEEN_SC_SEPERATOR :
BALL::VIEW::ShortcutRegistry
- bfreqf1_ :
BALL::Bruker2DFile
- bfreqf2_ :
BALL::Bruker2DFile
- BGR_24 :
BALL::VIEW::PixelFormat
- BGR_32 :
BALL::VIEW::PixelFormat
- BGRA_32 :
BALL::VIEW::PixelFormat
- bigX :
BALL::VIEW::VRMLRenderer
- bigY :
BALL::VIEW::VRMLRenderer
- bigZ :
BALL::VIEW::VRMLRenderer
- Bij_ :
BALL::LennardJones
- bijection_ :
BALL::StructureMapper
- bind_distance_offset_ :
BALL::RotationalEntropyLoss
- bitset_ :
BALL::BitVector
- bitSize :
BALL::VIEW::ChannelFormat
- bitvector_ :
BALL::PropertyManager ,
BALL::Bit
- bitvector_muteable_ :
BALL::Bit
- block_definition_ :
BALL::AssignBondOrderProcessor
- block_to_length_ :
BALL::AssignBondOrderProcessor
- block_to_start_idx_ :
BALL::AssignBondOrderProcessor
- block_to_start_valence_ :
BALL::AssignBondOrderProcessor
- blockname :
BALL::GAMESSDatFile::block
- blocks_ :
BALL::GAMESSDatFile
- BlockSize :
BALL::BitVector
- blue_ :
BALL::VIEW::ColorRGBA
- BMRB_accession_code :
BALL::NMRStarFile::EntryInformation
- bmrb_to_ball_map_ :
BALL::NMRStarFile::BALLToBMRBMapper
- BOHR_RADIUS :
BALL::Constant
- BOLTZMANN :
BALL::Constant
- bond :
BALL::VIEW::EditableScene::EditOperation
- bond_ :
BALL::Atom ,
BALL::EdgeItem< Node, Edge > ,
BALL::SmartsParser::SPEdge
- bond_action_ :
BALL::VIEW::EditableScene
- bond_angles_ :
BALL::HybridisationProcessor
- bond_atom :
BALL::PDB::RecordCONECT
- bond_fixed_ :
BALL::AssignBondOrderProcessor
- bond_format_ :
BALL::MOLFile
- BOND_LENGTH_C_O :
BALL::HBondProcessor
- BOND_LENGTH_N_H :
BALL::HBondProcessor
- bond_length_normalization_factor :
BALL::AssignBondOrderProcessor::PQ_Entry_
- bond_length_normalization_factor_ :
BALL::AssignBondOrderProcessor
- bond_length_penalty :
BALL::AssignBondOrderProcessor::Solution_
- BOND_LENGTH_WEIGHTING :
BALL::AssignBondOrderProcessor::Default ,
BALL::AssignBondOrderProcessor::Option
- bond_lengths_ :
BALL::BuildBondsProcessor
- bond_lengths_penalties_ :
BALL::AssignBondOrderProcessor
- bond_list_ :
BALL::EFShiftProcessor
- bond_order_ :
BALL::Bond ,
BALL::SmartsParser::SPBond ,
BALL::VIEW::EditableScene
- bond_order_dialog_ :
BALL::VIEW::MolecularStructure
- bond_order_processor_ :
BALL::VIEW::AssignBondOrderResultsDialog
- bond_order_results_dialog_ :
BALL::VIEW::MolecularStructure
- bond_orders :
BALL::AssignBondOrderProcessor::Solution_ ,
BALL::AssignBondOrderProcessor::PQ_Entry_
- bond_parameters_ :
BALL::MMFF94
- bond_propertes_action_ :
BALL::VIEW::MolecularControl
- BOND_REACTING_CENTER_STATUS :
BALL::MOLFile::Property
- BOND_STEREO :
BALL::MOLFile::Property
- bond_to_edge_ :
BALL::TMolecularGraph< Node, Edge >
- bond_to_index_ :
BALL::RingPerceptionProcessor ,
BALL::AssignBondOrderProcessor
- BOND_TOPOLOGY :
BALL::MOLFile::Property
- bond_type_ :
BALL::ConnectedToPredicate::CTPNode ,
BALL::Bond
- BONDLENGTHS_FILENAME :
BALL::BuildBondsProcessor::Option ,
BALL::BuildBondsProcessor::Default
- bondorders_action_ :
BALL::VIEW::EditableScene
- bonds :
BALL::PDB::Structure::ConectAtomList
- bonds_ :
BALL::MOL2File ,
BALL::MMFF94
- bonds_built_ :
BALL::FragmentDB::BuildBondsProcessor
- book_keeping_ :
BALL::PDBFile
- bool_value :
BALL::SmartsParser::SPAtom::PropertyValue
- bootstrap_samples :
BALL::QSAR::ValidationConfiguration
- BORDER :
BALL::FDPB::Default ,
BALL::FDPB::Option
- border_ :
BALL::VIEW::TilingRenderer
- born_radii_ :
BALL::GeneralizedBornModel
- bottom_ :
BALL::VIEW::GLRenderer
- bound_ :
BALL::Composite::CompositeIteratorTraits ,
BALL::HashSet< Key >::IteratorTraits ,
BALL::Atom::BondIteratorTraits ,
BALL::ResourceEntry::IteratorTraits_ ,
BALL::Enumerator< Container, SiteIterator, Variant
>::IteratorTraits_ ,
BALL::Composite::ChildCompositeIteratorTraits ,
BALL::Composite::AncestorIteratorTraits ,
BALL::HashGrid3< Item >::BoxIteratorTraits ,
BALL::HashGridBox3< Item >::BoxIteratorTraits ,
BALL::HashGridBox3< Item >::DataIteratorTraits ,
BALL::Substring ,
BALL::CompositeIteratorTraits ,
BALL::DiagonalIteratorTraits< valuetype, mtraits >
,
BALL::ElementRowIteratorTraits< valuetype, mtraits
> ,
BALL::INIFile::IteratorTraits_ ,
BALL::ColumnIteratorTraits< valuetype, mtraits > ,
BALL::RowIteratorTraits< valuetype, mtraits > ,
BALL::VectorIteratorTraits< valuetype > ,
BALL::ElementColumnIteratorTraits< valuetype, mtraits
>
- BOUNDARY :
BALL::FDPB::Default ,
BALL::FDPB::Option
- boundary_points_ :
BALL::FDPB
- bounding_box_ :
BALL::ReducedSurface
- bounding_box_data_size :
BALL::TRRFile::TRRHeader
- BOUNDING_BOX_LOWER :
BALL::FDPB::Option
- BOUNDING_BOX_UPPER :
BALL::FDPB::Option
- box1_ :
BALL::TRRFile
- box2_ :
BALL::TRRFile
- box3_ :
BALL::TRRFile
- box_ :
BALL::HINFile ,
BALL::HashGrid3< Item > ,
BALL::PeriodicBoundary
- bp_ligand_ :
BALL::BuriedPolar
- BP_R1_OFFSET :
BALL::BuriedPolar::Option ,
BALL::BuriedPolar::Default
- BP_R2_OFFSET :
BALL::BuriedPolar::Option ,
BALL::BuriedPolar::Default
- bp_receptor_ :
BALL::BuriedPolar
- BRANCH_AND_BOUND :
BALL::AssignBondOrderProcessor::Algorithm
- BRANCH_AND_BOUND_CUTOFF :
BALL::AssignBondOrderProcessor::Option ,
BALL::AssignBondOrderProcessor::Default
- branch_designator_ :
BALL::PDBAtom
- browser_ :
BALL::VIEW::HelpViewer
- bt :
BALL::TRegularData1D< ValueType >::BlockValueType ,
BALL::TRegularData2D< ValueType >::BlockValueType ,
BALL::TRegularData3D< ValueType
>::BlockValueType
- bucket_ :
BALL::HashSet< Key > ,
BALL::HashSet< Key >::IteratorTraits
- buffer :
BALL::SmilesParser::State ,
BALL::ExpressionParser::State ,
BALL::SmartsParser::State
- buffer_ :
BALL::VIEW::MeshBuffer ,
BALL::MOL2File
- buffer_counter_ :
BALL::SnapShotManager
- buffered_parameters_ :
BALL::MMFF94PlaneParameters ,
BALL::MMFF94StretchParameters ,
BALL::MMFF94TorsionParameters ,
BALL::MMFF94StretchBendParameters ,
BALL::MMFF94BendParameters
- bufferFormat :
BALL::VIEW::BufferedRenderer
- build_bonds :
BALL::FragmentDB
- build_bonds_id_ :
BALL::VIEW::MolecularStructure
- build_peptide_id_ :
BALL::VIEW::MolecularStructure
- bulk_water_dc_ :
BALL::PolarSolvation
- BURIAL_COUNT_RADIUS :
BALL::BindingPocketProcessor::Option ,
BALL::BindingPocketProcessor::Default
- BURIAL_COUNT_THRESHOLD :
BALL::BindingPocketProcessor::Option ,
BALL::BindingPocketProcessor::Default
- BURIAL_COUNT_THRESHOLD_HYDROGEN_FREE :
BALL::BindingPocketProcessor::Option ,
BALL::BindingPocketProcessor::Default
- busy_ :
BALL::VIEW::MeshBuffer
- button_ :
BALL::VIEW::TestFramework
- button_state :
BALL::VIEW::Hotkey
- buttons_ :
BALL::VIEW::ButtonEvent ,
BALL::VIEW::TestFramework
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