Here is a list of all class members with links to the classes they belong to:

- d -

• d : BALL::TLine3< T > , BALL::BindingPocketProcessor::Sphere_
• D_1_ : BALL::ConjugateGradientMinimizer
• D_4_ : BALL::ConjugateGradientMinimizer
• dashed_bonds_ : BALL::VIEW::AddBallAndStickModel
• dashedBondsEnabled() : BALL::VIEW::AddBallAndStickModel
• dat_ : BALL::Bruker2DFile
• Data() : BALL::ResidueTorsions::Data
• data : BALL::VIEW::FrameBuffer , BALL::VIEW::PluginModel
• Data() : BALL::ResidueTorsions::Data
• data() : BALL::VIEW::Message , BALL::VIEW::ShortcutTableModel , BALL::HashGridBox3< Item > , BALL::CIFFile::Datablock , BALL::GAMESSDatFile::block , BALL::QSAR::ValidationConfiguration , BALL::QSAR::PredictionConfiguration , BALL::QSAR::Model
• data_ : BALL::VIEW::Message , BALL::VIEW::RegularData1DWidget , BALL::VIEW::RegularData2DWidget , BALL::NamedProperty , BALL::TContourLine< T > , BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType > , BALL::MMFF94AtomTypes , BALL::Spectrum< DataT, PeakT, PositionT > , BALL::QSAR::AutomaticModelCreator , BALL::NodeItem< Node, Edge > , BALL::EdgeItem< Node, Edge > , BALL::BinaryFileAdaptor< T > , BALL::SimpleDownloaderHelper::UPThread
• data_file : BALL::QSAR::ModelConfiguration , BALL::QSAR::FeatureSelectionConfiguration
• data_folder_ : BALL::ML::MLData , BALL::PartialChargeBase , BALL::PartialChargeProcessor , BALL::QSAR::QSARData , BALL::SimpleBase
• dataAdress_ : BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• database : BALL::PDB::RecordSEQADV
• datablocks_ : BALL::CIFFile
• datablocks_hash_ : BALL::CIFFile
• DataContainer : BALL::HashGridBox3< Item >
• Datacontent() : BALL::CIFFile::Datacontent
• dataitem : BALL::CIFFile::Datacontent
• DataIterator : BALL::HashGridBox3< Item >
• DataIteratorPosition : BALL::HashGridBox3< Item >
• DataIteratorTraits : BALL::HashGridBox3< Item > , BALL::HashGridBox3< Item >::DataIteratorTraits
• dataLength_ : BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• Dataset() : BALL::VIEW::Dataset
• dataset_ : BALL::VIEW::DatasetMessage
• dataset_to_item_ : BALL::VIEW::DatasetController
• dataset_type_ : BALL::VIEW::DatasetMessage
• DatasetControl : BALL::VIEW::DatasetController , BALL::VIEW::DatasetControl
• DatasetController() : BALL::VIEW::DatasetController
• DatasetMessage() : BALL::VIEW::DatasetMessage
• dataTransferProgress() : BALL::PubChemDownloader
• DataType : BALL::BaseFilterIterator< Predicate, IteratorBase > , BALL::ConstBidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::BidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::ConstForwardFilterIterator< Predicate, IteratorForward > , BALL::ForwardFilterIterator< Predicate, IteratorForward > , BALL::ConstRandomAccessFilterIterator< Predicate, IteratorRandomAccess > , BALL::Spectrum< DataT, PeakT, PositionT >
• date : BALL::PDB::RecordSPRSDE
• Db : BALL::Element
• db_ : BALL::DNAMutator
• db_id_code : BALL::PDB::RecordSEQADV
• db_res : BALL::PDB::RecordSEQADV
• db_seq : BALL::PDB::RecordSEQADV
• dc_ : BALL::MMFF94NonBonded
• DC_SOLUTE : BALL::GeneralizedBornModel::Option , BALL::GeneralizedBornModel::Default
• dc_solute_ : BALL::GeneralizedBornModel::GBParameters , BALL::GeneralizedBornModel
• DC_SOLVENT : BALL::GeneralizedBornModel::Option , BALL::GeneralizedBornModel::Default
• dc_solvent_ : BALL::GeneralizedBornModel::GBParameters , BALL::GeneralizedBornModel
• dcd_file_ : BALL::VIEW::SimulationThread
• DCDFile() : BALL::DCDFile
• deactivate() : BALL::BALLPlugin , BALL::TCPServer , BALL::TCPServerThread , BALL::VIEW::ServerWidget
• DEBYE : BALL::FDPB::Boundary
• decodeBase64() : BALL::String
• DEFAULT : BALL::VIEW::DockingController , BALL::VIEW::EditableScene::EditOperation
• default_color_ : BALL::VIEW::ColorProcessor , BALL::VIEW::ColorButton
• DEFAULT_COLOR_FOR_OUTSIDE_COLORS : BALL::VIEW::InterpolateColorProcessor
• default_communicator_ : BALL::MPISupport
• default_correlation_cutoff : BALL::QSAR::Registry
• DEFAULT_FRAGMENT_DB : BALL::RotamerLibrary
• default_gridsearch_par1_start : BALL::QSAR::Registry
• default_gridsearch_par2_start : BALL::QSAR::Registry
• default_gridsearch_recursion : BALL::QSAR::Registry
• default_gridsearch_steps : BALL::QSAR::Registry
• default_gridsearch_stepwidth : BALL::QSAR::Registry
• default_hydrogen_target_nucleus_factor_ : BALL::HaighMallionShiftProcessor
• default_k : BALL::QSAR::Registry
• default_kernel_par1 : BALL::QSAR::Registry
• default_kernel_par2 : BALL::QSAR::Registry
• DEFAULT_LIBRARY : BALL::RotamerLibrary
• default_lights_ : BALL::VIEW::LightSettings
• default_nested_folds : BALL::QSAR::Registry
• default_no_boostrap_samples : BALL::QSAR::Registry
• default_no_opt_steps_ : BALL::QSAR::Model
• default_no_permutations : BALL::QSAR::Registry
• default_num_steps_ : BALL::DNAMutator
• default_page_ : BALL::VIEW::HelpViewer
• default_peak_ : BALL::Experiment< PeakListType >
• DEFAULT_PROCESSOR : BALL::Composite
• default_rbf_par : BALL::QSAR::Registry
• default_standard_ : BALL::FragmentDB
• DEFAULT_UNARY_PREDICATE : BALL::Composite
• default_valdition_fraction : BALL::QSAR::Registry
• default_value_ : BALL::CubicSpline1D , BALL::CubicSpline2D
• default_values_ : BALL::VIEW::PreferencesEntry
• default_visible_ : BALL::VIEW::ModularWidget
• defaultAssign_() : BALL::Enumerator< Container, SiteIterator, Variant >
• defaultsPressed() : BALL::VIEW::LightSettings
• DEG_PER_RAD : BALL::Constant
• DEG_PHI : BALL::GeometricFit::Option , BALL::GeometricFit::Default
• DEG_PSI : BALL::GeometricFit::Option , BALL::GeometricFit::Default
• DEG_THETA : BALL::GeometricFit::Option , BALL::GeometricFit::Default
• DEGREE : BALL::SmartsParser::SPAtom
• degree_ : BALL::PiecewisePolynomial
• DEGREE_INTERVAL : BALL::GeometricFit::Option , BALL::GeometricFit::Default
• delegate_ : BALL::VIEW::HotkeyTable
• deletable_ : BALL::VIEW::Message
• delete_action_ : BALL::VIEW::MainControl
• delete_buffer_ : BALL::LogStream
• DELETE_ENTRY : BALL::VIEW::MolecularControl
• DELETE_EXISTING_BONDS : BALL::BuildBondsProcessor::Option , BALL::BuildBondsProcessor::Default
• delete_force_field_ : BALL::ForceFieldEvaluation
• delete_id_ : BALL::VIEW::MolecularControl
• DELETE_OVERESTIMATED_BONDS : BALL::BuildBondsProcessor::Option , BALL::BuildBondsProcessor::Default
• deleteAtom_() : BALL::VIEW::EditableScene
• deleteBond_() : BALL::VIEW::EditableScene
• deleteBuckets_() : BALL::HashSet< Key >
• deleteChildrenList_() : BALL::Composite
• deleteClicked() : BALL::VIEW::MainControl
• deleteColumn_() : BALL::VIEW::DockResultDialog
• deleteCurrentItems() : BALL::VIEW::DatasetControl , BALL::VIEW::GenericControl , BALL::VIEW::GeometricControl , BALL::VIEW::MolecularControl
• deleted_properties_ : BALL::VIEW::PropertyEditor
• deleteDataset() : BALL::VIEW::DatasetController
• deleteDataset_() : BALL::VIEW::DatasetController , BALL::VIEW::RegularData3DController , BALL::VIEW::TrajectoryController , BALL::VIEW::DockResultController , BALL::VIEW::VectorGridController , BALL::VIEW::RaytraceableGridController
• deleteDatasets() : BALL::VIEW::DatasetController
• deleteDescriptorIDs() : BALL::QSAR::Model
• deleteEdge() : BALL::TMolecularGraph< Node, Edge >
• deleteEdge_() : BALL::NodeItem< Node, Edge >
• deleteEntry() : BALL::ResourceEntry
• deleteEntryArray() : BALL::ResourceEntry
• deleteIsolatedEdges() : BALL::TriangulatedSurface
• deleteIsolatedPoints() : BALL::TriangulatedSurface
• deleteLine() : BALL::INIFile
• deleteNode() : BALL::TMolecularGraph< Node, Edge >
• deleteNode_() : BALL::HashSet< Key >
• deleteOverestimatedBonds_() : BALL::BuildBondsProcessor
• deleteProperty() : BALL::VIEW::PropEditorWidget
• deleteProperty_() : BALL::VIEW::PropertyEditor
• deleteRotamer() : BALL::ResidueRotamerSet
• deleteRotamers() : BALL::ResidueRotamerSet
• deleteScoring() : BALL::DockResult
• deleteSection() : BALL::INIFile
• deleteSimilarFaces() : BALL::ReducedSurface
• deleteSmallSingularToricFace() : BALL::SolventExcludedSurface
• deleteSmallToricFace() : BALL::SolventExcludedSurface
• deleteTexture() : BALL::VIEW::GLRenderWindow
• deleteVariants() : BALL::Enumerator< Container, SiteIterator, Variant >
• DELIMITER_TAG : BALL::KCFFile
• DELOCALIZED_BOND : BALL::GAFFCESParser::APSMatcher
• DELOCALIZED_BOND_TO_PARENT : BALL::GAFFCESParser::APSMatcher
• DELTA : BALL::GeneralizedBornModel::Option , BALL::GeneralizedBornModel::Default
• delta : BALL::FragmentDB::BuildBondsProcessor::Connection
• delta_ : BALL::GeneralizedBornModel::GBParameters , BALL::GeneralizedBornModel
• delta_r : BALL::MMFF94StretchBend::Stretch
• delta_theta : BALL::MMFF94StretchBend::Bend
• demo_action_ : BALL::VIEW::DemoTutorialDialog
• demo_mode_ : BALL::VIEW::DemoTutorialDialog
• DemoTutorialDialog() : BALL::VIEW::DemoTutorialDialog
• Density() : BALL::Density
• density_ : BALL::SurfaceProcessor , BALL::TriangulatedSAS , BALL::TriangulatedSES , BALL::TriangulatedSurface
• DEPOSITED : BALL::SDGenerator
• deposition_date : BALL::PDB::RecordHEADER
• depositPFU_() : BALL::SDGenerator
• depth_ : BALL::TBox3< T > , BALL::SmartsMatcher , BALL::UCK
• DEPTH_CHANNEL : BALL::VIEW::ChannelFormat
• depth_vector_ : BALL::TBox3< T >
• description : BALL::VIEW::PubChemDialog::ParsedResult_ , BALL::VIEW::EditableScene::EditOperation
• descriptions_ : BALL::VIEW::AssignBondOrderResultsDialog , BALL::VIEW::PubChemDialog
• Descriptor() : BALL::Descriptor
• descriptor_IDs_ : BALL::QSAR::Model
• descriptor_matrix : BALL::QSAR::RegressionValidation::BackupData
• descriptor_matrix_ : BALL::ML::MLData , BALL::QSAR::Model , BALL::QSAR::QSARData
• descriptor_names_ : BALL::QSAR::Model
• descriptor_source_model : BALL::QSAR::ModelConfiguration
• descriptor_transformations_ : BALL::ML::MLData , BALL::QSAR::Model , BALL::QSAR::QSARData
• deselect() : BALL::VIEW::MolecularControl
• DESELECT : BALL::VIEW::MolecularControl
• deselect() : BALL::Composite , BALL::Selectable
• deselect_() : BALL::Composite , BALL::VIEW::EditableScene
• deselect_action_ : BALL::VIEW::MolecularControl
• deselect_id_ : BALL::VIEW::MolecularControl
• deselectCompositeRecursive() : BALL::VIEW::MainControl
• DeselectControlsMessage() : BALL::VIEW::DeselectControlsMessage
• DESELECTED_COMPOSITE : BALL::VIEW::CompositeMessage
• deselectOtherControls_() : BALL::VIEW::GenericControl
• desolv_ligand_ : BALL::PolarSolvation
• desolv_protein_ : BALL::PolarSolvation
• destroy() : BALL::Composite , BALL::PropertyManager , BALL::HashGridBox3< Item > , BALL::HashGrid3< Item > , BALL::HashSet< Key > , BALL::List< Value > , BALL::RegularExpression , BALL::String , BALL::Substring , BALL::StringHashMap< Value > , BALL::ResourceEntry , BALL::ResourceFile , BALL::Atom , BALL::AtomContainer , BALL::Bond , BALL::NucleicAcid , BALL::Nucleotide , BALL::PDBAtom , BALL::Protein , BALL::Residue , BALL::SecondaryStructure , BALL::ConnectedToPredicate::CTPNode , BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits > , BALL::RuleProcessor , BALL::FDPB , BALL::FragmentDB , BALL::SmartsMatcher::RecStructPool_ , BALL::Directory , BALL::VIEW::ConnectionObject , BALL::VIEW::ModularWidget
• destroy_() : BALL::GeometricFit
• destroyBond() : BALL::Atom
• destroyBonds() : BALL::Atom , BALL::AtomContainer
• destroyGrids() : BALL::FDPB
• desynchronize_() : BALL::Directory
• details : BALL::NMRStarFile::Sample , BALL::NMRStarFile::MonomericPolymer , BALL::NMRStarFile::MolecularSystem::RelatedDB
• determineMethodOfAtomPairGeneration() : BALL::AmberNonBonded , BALL::CharmmNonBonded , BALL::MMFF94NonBonded
• determineSelection_() : BALL::Composite
• deviation_sigma_ : BALL::CCP4File
• device_ : BALL::VIEW::DeviceEvent
• DeviceEvent() : BALL::VIEW::DeviceEvent
• dfs() : BALL::RingFinder
• DFSBCC_() : BALL::RingPerceptionProcessor
• dG_free : BALL::CharmmEEF1::Values
• dG_free_ : BALL::CharmmEEF1
• dG_ref : BALL::CharmmEEF1::Values
• dG_ref_ : BALL::CharmmEEF1
• dH_ref : BALL::CharmmEEF1::Values
• dH_ref_ : BALL::CharmmEEF1
• DiagonalIteratorTraits() : BALL::DiagonalIteratorTraits< valuetype, mtraits >
• diagram_color_ : BALL::VIEW::RegularData1DWidget , BALL::VIEW::RegularData2DWidget
• dialog_ : BALL::VIEW::RegularData3DController , BALL::VIEW::TrajectoryController , BALL::VIEW::VectorGridController , BALL::VIEW::CalculateFDPBThread
• dialogButtonClicked_() : BALL::VIEW::AssignBondOrderConfigurationDialog
• dialogButtonsClicked_() : BALL::VIEW::Preferences
• dictionary_type : BALL::MOL2File::SubstructureStruct
• DIELECTRIC_SMOOTHING : BALL::FDPB::Option , BALL::FDPB::Default
• difference() : BALL::Spectrum< DataT, PeakT, PositionT >
• difference_type : BALL::BaseIterator< Container, DataType, Position, Traits > , BALL::HashSet< Key > , BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType > , BALL::PDBRecords , BALL::BaseFilterIterator< Predicate, IteratorBase > , BALL::BaseIterator< Container, DataType, Position, Traits > , BALL::ConstBidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::BidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::ConstForwardFilterIterator< Predicate, IteratorForward > , BALL::ForwardFilterIterator< Predicate, IteratorForward > , BALL::ConstRandomAccessFilterIterator< Predicate, IteratorRandomAccess > , BALL::RandomAccessFilterIterator< Predicate, IteratorRandomAccess > , BALL::VIEW::CompositeManager
• differenceSpectrum() : BALL::Spectrum< DataT, PeakT, PositionT >
• DifferenceType : BALL::PDBRecords
• diffuse_ : BALL::VIEW::Stage
• dimension_ : BALL::ShiftModel2D , BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType > , BALL::ShiftModel1D
• dimension_x_ : BALL::HashGrid3< Item >
• dimension_y_ : BALL::HashGrid3< Item >
• dimension_z_ : BALL::HashGrid3< Item >
• DIPOLE : BALL::FDPB::Boundary
• dir_ : BALL::Directory
• DIRECT_RENDERING : BALL::VIEW::GLRenderer
• direction_ : BALL::EnergyMinimizer , BALL::VIEW::LightSource
• DIRECTIONAL : BALL::VIEW::LightSource
• Directory() : BALL::Directory
• directory_path_ : BALL::Directory
• directorySelectionChanged() : BALL::VIEW::PluginDialog
• dirent_ : BALL::Directory
• disable() : BALL::PeriodicBoundary , BALL::ResidueChecker
• disable_output_ : BALL::LogStream
• disableAtoms() : BALL::SDFile
• disabled : BALL::LogStreamBuf::StreamStruct
• disableLoggingToFile() : BALL::VIEW::MainControl
• disableOutput() : BALL::LogStream
• disableSelection() : BALL::ForceField , BALL::ResidueChecker
• disableTransformation() : BALL::File
• disableVelocityStorage() : BALL::DCDFile
• Disc() : BALL::VIEW::Disc
• DISCRETE__CHI : BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
• DISCRETE__DISCRETE : BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
• DISCRETE__REAL : BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
• discretization_steps_ : BALL::QSAR::NBModel
• discretizeFeatures : BALL::QSAR::ClassificationModel
• discretizeTestDataFeatures : BALL::QSAR::ClassificationModel
• discretizeY() : BALL::ML::MLData , BALL::QSAR::QSARData
• DISPLAY : BALL::VIEW::MainControl
• DISPLAY_ANIMATION : BALL::VIEW::MainControl
• DISPLAY_CREATE : BALL::VIEW::MainControl
• display_lists_ : BALL::VIEW::GLRenderer
• display_lists_index_ : BALL::VIEW::GLRenderer
• DISPLAY_LISTS_RENDERING : BALL::VIEW::GLRenderer
• DISPLAY_STEREO : BALL::VIEW::MainControl
• DISPLAY_VIEWPOINT : BALL::VIEW::MainControl
• DISPLAYLIST_NOT_DEFINED : BALL::VIEW::GLDisplayList
• DisplayListHashMap : BALL::VIEW::GLRenderer
• DisplayListRedeclaration() : BALL::VIEW::GLDisplayList::DisplayListRedeclaration
• displayMatrix() : BALL::ML::MLData , BALL::QSAR::QSARData
• DisplayProperties() : BALL::VIEW::DisplayProperties
• dist : BALL::FragmentDB::BuildBondsProcessor::Connection
• distance() : BALL::QSAR::Statistics
• Distance : BALL::ColumnIteratorTraits< valuetype, mtraits > , BALL::DiagonalIteratorTraits< valuetype, mtraits > , BALL::ElementColumnIteratorTraits< valuetype, mtraits > , BALL::ElementRowIteratorTraits< valuetype, mtraits > , BALL::RowIteratorTraits< valuetype, mtraits > , BALL::VectorIteratorTraits< valuetype >
• distance() : BALL::QSAR::Statistics
• distance_ : BALL::VIEW::AtomDistanceColorProcessor
• distance_action_ : BALL::VIEW::MolecularControl
• DISTANCE_DEPENDENT_DIELECTRIC : BALL::CharmmFF::Default , BALL::AmberFF::Option , BALL::AmberFF::Default , BALL::CharmmFF::Option , BALL::MMFF94::Option , BALL::MMFF94::Default
• DISTANCE_TOLERANCE : BALL::CHPI::Option , BALL::CHPI::Default
• distance_tolerance_ : BALL::CHPI
• distributeDatapoints() : BALL::MPISupport
• Division() : BALL::Division< First, Second, DataType >
• DivisionByZero() : BALL::Exception::DivisionByZero
• dl_ : BALL::PubChemDownloader
• DLArrayHelper() : BALL::SimpleDownloaderHelper::DLArrayHelper
• DLHelper() : BALL::SimpleDownloaderHelper::DLHelper
• DLThread() : BALL::SimpleDownloaderHelper::DLThread
• DNA_base_radius_ : BALL::VIEW::AddCartoonModel
• DNA_helix_radius_ : BALL::VIEW::AddCartoonModel
• DNA_ladder_radius_ : BALL::VIEW::AddCartoonModel
• DNAMutator() : BALL::DNAMutator
• do_resize_ : BALL::VIEW::RenderSetup
• dock_alg_ : BALL::VIEW::DockingThread , BALL::VIEW::DockingController
• dock_dialog_ : BALL::VIEW::DockingController
• dock_res_ : BALL::VIEW::DockResultDialog
• dock_result_dialog_ : BALL::VIEW::DockingController
• DockableRegularData1DWidget() : BALL::VIEW::DockableRegularData1DWidget
• DockableRegularData2DWidget() : BALL::VIEW::DockableRegularData2DWidget
• DockDialog() : BALL::VIEW::DockDialog
• docked_system_ : BALL::VIEW::DockResultDialog , BALL::DockResult
• docking_algorithm_ : BALL::DockResult
• docking_options_ : BALL::DockResult
• docking_partner1_ : BALL::VIEW::DockDialog
• docking_partner2_ : BALL::VIEW::DockDialog
• DockingController() : BALL::VIEW::DockingController
• DockingFinishedMessage() : BALL::VIEW::DockingFinishedMessage
• DockingThread() : BALL::VIEW::DockingThread
• DockProgressDialog() : BALL::VIEW::DockProgressDialog
• DockResult() : BALL::DockResult
• DockResultController() : BALL::VIEW::DockResultController
• DockResultDialog() : BALL::VIEW::DockResultDialog
• DockWidget() : BALL::VIEW::DockWidget
• docu_entries_ : BALL::VIEW::HelpViewer
• doFFT() : BALL::TFFT3D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT1D< ComplexTraits >
• doiFFT() : BALL::TFFT2D< ComplexTraits > , BALL::TFFT1D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• doMatch_() : BALL::FragmentDB::NormalizeNamesProcessor
• done : BALL::QSAR::InputConfiguration , BALL::QSAR::InputPartitioningConfiguration , BALL::QSAR::PredictionConfiguration , BALL::QSAR::ValidationConfiguration , BALL::QSAR::ModelConfiguration , BALL::QSAR::FeatureSelectionConfiguration , BALL::SimpleDownloaderHelper::QFtpHackHelper
• donor_ : BALL::HBondProcessor::HBond
• donor_acceptor : BALL::MMFF94VDWParameters::VDWEntry
• donor_is_hydrogen_ : BALL::HBondProcessor::HBond
• donor_occupied_ : BALL::HBondShiftProcessor
• donorIsHydrogen() : BALL::HBondProcessor::HBond
• donors_ : BALL::HBondProcessor , BALL::HBondShiftProcessor
• doPreTranslation_() : BALL::GeometricFit
• dot_size_ : BALL::VIEW::GridVisualisation
• DOTS : BALL::VIEW::GridVisualisation
• DOUBLE : BALL::SmartsParser::SPBond , BALL::NamedProperty
• double_bond : BALL::Kekuliser::AtomInfo
• DOUBLE_BOND : BALL::GAFFCESParser::APSMatcher
• DOUBLE_BOND_TO_PARENT : BALL::GAFFCESParser::APSMatcher
• DoubleEditorWidget() : BALL::VIEW::DoubleEditorWidget
• download_() : BALL::SimpleDownloader
• DownloadElectronDensity() : BALL::VIEW::DownloadElectronDensity
• downloadEnded_() : BALL::VIEW::DownloadPDBFile , BALL::VIEW::DownloadElectronDensity
• downloader_ : BALL::VIEW::PubChemDialog
• downloadFinished() : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::PubChemDialog , BALL::PubChemDownloader , BALL::VIEW::DownloadPDBFile , BALL::PubChemDownloader
• DownloadHelper() : BALL::VIEW::PubChemDialogPrivate::DownloadHelper
• DownloadPDBFile() : BALL::VIEW::DownloadPDBFile
• downloadProgress() : BALL::VIEW::DownloadElectronDensity , BALL::PubChemDownloader , BALL::VIEW::DownloadPDBFile
• downloadSDF() : BALL::PubChemDownloader
• downloadStarted_() : BALL::VIEW::DownloadPDBFile , BALL::VIEW::DownloadElectronDensity
• downloadToBuffer() : BALL::SimpleDownloader
• downloadToFile() : BALL::SimpleDownloader
• downwardClicked() : BALL::VIEW::DockResultDialog
• drag_ : BALL::VIEW::SnapshotVisualisationDialog
• dragEnterEvent() : BALL::VIEW::Scene , BALL::VIEW::DockWidget
• DragLogView() : BALL::VIEW::DragLogView
• draw() : BALL::VIEW::GLDisplayList , BALL::VIEW::MeshBuffer
• draw_box : BALL::VIEW::GridVisualisation
• draw_DNA_as_ladder_ : BALL::VIEW::AddCartoonModel
• draw_ribbon_ : BALL::VIEW::AddCartoonModel
• drawBuffered() : BALL::VIEW::GLRenderer
• drawDNAAsLadderModel() : BALL::VIEW::AddCartoonModel
• drawed_mesh_ : BALL::VIEW::GLRenderer
• drawed_other_object_ : BALL::VIEW::GLRenderer
• drawFrame_() : BALL::VIEW::SDWidget
• drawing_mode_ : BALL::VIEW::Representation , BALL::VIEW::GLRenderer
• drawing_precision_ : BALL::VIEW::Representation , BALL::VIEW::GLRenderer , BALL::VIEW::ModelProcessor
• drawRiboseAtoms_() : BALL::VIEW::AddCartoonModel
• drawShape() : BALL::VIEW::CanvasWidget::PixmapItem
• drawStrand_() : BALL::VIEW::AddCartoonModel
• dropEvent() : BALL::VIEW::DockWidget , BALL::VIEW::Scene
• DSN6File() : BALL::DSN6File
• dual_stereo_action_ : BALL::VIEW::Scene
• dual_stereo_different_display_action_ : BALL::VIEW::Scene
• DUAL_VIEW_DIFFERENT_DISPLAY_STEREO : BALL::VIEW::GLRenderer
• DUAL_VIEW_STEREO : BALL::VIEW::GLRenderer
• DUBNIUM : BALL::Element
• dummy() : BALL::Visitor< Host >
• dummy_chain_ : BALL::VIEW::AddBackboneModel , BALL::VIEW::ChainColorProcessor
• dummy_data_item_ : BALL::CIFFile::SaveFrame , BALL::CIFFile::Datablock
• dummy_indices_ : BALL::CIFFile::Datablock
• dummy_molecule_ : BALL::VIEW::MoleculeColorProcessor , BALL::SMARTSPredicate
• dummy_monomeric_polymer_ : BALL::NMRStarFile
• dummy_NMR_spectrometer_ : BALL::NMRStarFile
• dummy_protein_ : BALL::VIEW::AddBackboneModel
• dummy_residue : BALL::VIEW::ResidueNameColorProcessor
• dummy_residue_ : BALL::VIEW::ResidueTypeColorProcessor , BALL::VIEW::ResidueNumberColorProcessor
• dummy_sample_ : BALL::NMRStarFile
• dummy_sample_condition_ : BALL::NMRStarFile
• dummy_saveframe_ : BALL::CIFFile::Datablock , BALL::NMRStarFile
• dummy_saveframes_ : BALL::CIFFile::Datablock
• dummy_shift_reference_set_ : BALL::NMRStarFile
• dummy_ss_ : BALL::VIEW::SecondaryStructureColorProcessor , BALL::VIEW::AddBackboneModel
• dummySlot() : BALL::VIEW::Scene
• dump() : BALL::HashGridBox3< Item > , BALL::VIEW::TwoColoredLine , BALL::VIEW::ColorHSV , BALL::VIEW::MultiColorExtension , BALL::Selectable , BALL::String , BALL::VIEW::Stage , BALL::Embeddable , BALL::Object , BALL::ResourceEntry , BALL::VIEW::AddLineModel , BALL::LogStreamBuf , BALL::TAngle< T > , BALL::HashGrid3< Item > , BALL::Nucleotide , BALL::RegularExpression , BALL::AtomContainer , BALL::Atom , BALL::TPlane3< T > , BALL::VIEW::AddBackboneModel , BALL::VIEW::Vertex2 , BALL::CHPI::AromaticRing , BALL::VIEW::Label , BALL::VIEW::Sphere , BALL::VIEW::Camera , BALL::VIEW::GLRenderer , BALL::SecondaryStructure , BALL::VIEW::ModularWidget , BALL::VIEW::PreferencesEntry , BALL::VIEW::Mesh , BALL::TBox3< T > , BALL::PDBAtom , BALL::VIEW::LightSource , BALL::Residue , BALL::VIEW::ServerWidget , BALL::TVector4< T > , BALL::VIEW::MainControl , BALL::VIEW::RepresentationManager , BALL::VectorIteratorTraits< valuetype > , BALL::Options , BALL::ColumnIteratorTraits< valuetype, mtraits > , BALL::VIEW::ColorMap , BALL::PiecewisePolynomial , BALL::Chain , BALL::VIEW::Representation , BALL::Pair6_12RDFIntegrator , BALL::VIEW::ColorRGBA , BALL::VIEW::PyWidget , BALL::HashSet< Key > , BALL::Fragment , BALL::VIEW::ColorUnitHue , BALL::RuleProcessor , BALL::VIEW::Point , BALL::VIEW::ColorUnit , BALL::VIEW::AddSurfaceModel , BALL::RowIteratorTraits< valuetype, mtraits > , BALL::VIEW::Dataset , BALL::VIEW::Box , BALL::Timer , BALL::VIEW::ColorProcessor , BALL::PropertyManager , BALL::NucleicAcid , BALL::VIEW::ColorExtension2 , BALL::VIEW::AddVanDerWaalsModel , BALL::VIEW::AtomBondModelBaseProcessor , BALL::VIEW::AddBallAndStickModel , BALL::Composite , BALL::RuleEvaluator , BALL::Substring , BALL::ExpressionTree , BALL::CHPI::CHGroup , BALL::TVector2< T > , BALL::TQuaternion< T > , BALL::Molecule , BALL::VIEW::Disc , BALL::VIEW::ConnectionObject , BALL::Protein , BALL::TVector3< T > , BALL::TSimpleBox3< T > , BALL::VIEW::Vertex , BALL::VIEW::SimpleBox , BALL::TCircle3< T > , BALL::VIEW::CompositeManager , BALL::DiagonalIteratorTraits< valuetype, mtraits > , BALL::ConnectedToPredicate , BALL::PiecewiseFunction , BALL::TMatrix4x4< T > , BALL::VIEW::TwoColoredTube , BALL::Bond , BALL::ResourceFile , BALL::ExpressionParser::SyntaxTree , BALL::PairExpRDFIntegrator , BALL::VIEW::MultiLine , BALL::ElementColumnIteratorTraits< valuetype, mtraits > , BALL::RadialDistributionFunction , BALL::SmartsMatcher::RecStruct_ , BALL::VIEW::Scene , BALL::ElementRowIteratorTraits< valuetype, mtraits > , BALL::VIEW::GeometricObject , BALL::VIEW::Line , BALL::ConnectedToPredicate , BALL::Client , BALL::Kekuliser , BALL::VIEW::Tube , BALL::TLine3< T > , BALL::Atom::BondIteratorTraits , BALL::VIEW::ModelProcessor , BALL::TSphere3< T > , BALL::VIEW::GLDisplayList
• dumpTree() : BALL::SmartsParser
• dumpTreeRecursive_() : BALL::SmartsParser
• duplicate() : BALL::VIEW::GeometricControl
• DUPLICATE_ATOM_NAMES : BALL::ResidueChecker
• duplicateKeyCheckEnabled() : BALL::INIFile
• duplicateProperty() : BALL::VIEW::PropEditorWidget
• Dy : BALL::Element
• dynamic_rule : BALL::MOL2File::SetStruct
• DYSPROSIUM : BALL::Element