- c -

• c_str() : BALL::Substring
• calcConjugate_() : BALL::GeometricFit
• calcPrincipalMomentOfInertia_() : BALL::SimpleBase
• calculate() : BALL::FermiBaseFunction , BALL::LinearBaseFunction , BALL::ScoringBaseFunction , BALL::LinearBaseFunction , BALL::VIEW::FDPBDialog , BALL::ScoringBaseFunction , BALL::FermiBaseFunction
• calculate_() : BALL::SurfaceBase , BALL::VIEW::FDPBDialog , BALL::ConnectivityBase , BALL::Descriptor , BALL::PartialChargeBase , BALL::SimpleBase
• calculateAbsoluteCoordinates() : BALL::VIEW::Stage
• calculateAromaticSystems_() : BALL::Kekuliser
• calculateAverageMCC() : BALL::QSAR::ClassificationValidation
• calculateAverageSensitivity() : BALL::QSAR::ClassificationValidation
• calculateBALLDescriptors() : BALL::QSAR::QSARData
• calculateBendEmpiricalForceConstant() : BALL::MMFF94StretchBend
• calculateBendEmpiricalReferenceAngle() : BALL::MMFF94StretchBend
• calculateBornRadii_() : BALL::GeneralizedBornModel
• calculateCoefficientStdErrors() : BALL::QSAR::RegressionValidation
• calculateComplementaryBases_() : BALL::VIEW::AddCartoonModel
• calculateCreationEnergy_() : BALL::GeneralizedBornModel
• calculateDefaultBijection() : BALL::StructureMapper
• calculateDeltas_() : BALL::MMFF94StretchBend
• calculateDistances() : BALL::VIEW::AtomDistanceColorProcessor
• calculateDistanceScores_() : BALL::Kekuliser
• calculateEigenvectors() : BALL::QSAR::PCRModel
• calculateEnergy() : BALL::GeneralizedBornModel
• calculateEuclDistanceMatrix() : BALL::QSAR::ALLModel
• calculateFactors() : BALL::MicroCanonicalMD
• calculateFactors_() : BALL::CanonicalMD
• calculateFDPB() : BALL::VIEW::MolecularStructure
• CalculateFDPBThread() : BALL::VIEW::CalculateFDPBThread
• calculateForceFieldEnergy() : BALL::VIEW::MolecularStructure
• calculateFragmentBijection() : BALL::StructureMapper
• calculateGuidePoints_() : BALL::VIEW::AddBackboneModel
• calculateHBonds() : BALL::VIEW::MolecularStructure
• calculateHeuristic_() : BALL::MMFF94Torsion
• calculateHSV_() : BALL::VIEW::ColorHSV
• calculateIncludedVertices_() : BALL::VIEW::ModifyRepresentationDialog
• calculateKernelMatrix() : BALL::QSAR::Kernel
• calculateKernelMatrix1() : BALL::QSAR::Kernel
• calculateKernelMatrix2() : BALL::QSAR::Kernel
• calculateKernelMatrix3() : BALL::QSAR::Kernel
• calculateKernelMatrix4() : BALL::QSAR::Kernel
• calculateKernelVector() : BALL::QSAR::Kernel
• calculateKineticEnergy_() : BALL::SnapShotManager
• calculateLinePoints_() : BALL::VIEW::FieldLineCreator
• calculateMatrices_() : BALL::CrystalInfo
• calculateMean() : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
• calculateMinSpacing() : BALL::HashGrid3< Item >
• calculateModelParts() : BALL::VIEW::AddBackboneModel , BALL::VIEW::AddCartoonModel
• calculateOffsets() : BALL::QSAR::KernelModel , BALL::QSAR::LinearModel , BALL::QSAR::NonLinearModel , BALL::QSAR::RegressionModel
• calculateOverallAccuracy() : BALL::QSAR::ClassificationValidation
• calculateOverallMCC() : BALL::QSAR::ClassificationValidation
• calculatePEOE() : BALL::PartialChargeProcessor
• calculatePotential() : BALL::GeneralizedBornModel
• calculateProbabilities() : BALL::QSAR::BayesModel , BALL::QSAR::NBModel , BALL::QSAR::SNBModel
• calculateQOF() : BALL::QSAR::RegressionValidation
• calculateRamachandranPlot() : BALL::VIEW::MolecularStructure
• calculateRange() : BALL::PiecewiseFunction
• calculateReactionFieldEnergy() : BALL::FDPB
• calculateRelativeCoordinates() : BALL::VIEW::Stage
• calculateRGB_() : BALL::VIEW::ColorHSV
• calculateRibbonEllipse_() : BALL::VIEW::AddBackboneModel
• calculateRibbonPoints_() : BALL::VIEW::AddBackboneModel
• calculateRMSD() : BALL::AtomBijection , BALL::StructureMapper , BALL::VIEW::MolecularStructure
• calculateSBTIJK() : BALL::MMFF94StretchBend
• calculateScore() : BALL::ScoringComponent , BALL::ScoringFunction , BALL::AromaticRingStacking , BALL::BuriedPolar , BALL::CHPI , BALL::HydrogenBond , BALL::Lipophilic , BALL::NonpolarSolvation , BALL::PolarSolvation , BALL::RotationalEntropyLoss , BALL::VanDerWaals
• calculateSD() : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
• calculateSecondaryStructure() : BALL::VIEW::MolecularStructure
• calculateSolvationEnergy() : BALL::GeneralizedBornModel
• calculateSSSR() : BALL::RingPerceptionProcessor
• calculateStdErr() : BALL::QSAR::GPModel , BALL::QSAR::Model
• calculateStretchConstant() : BALL::MMFF94StretchBend
• calculateStretchR0() : BALL::MMFF94StretchBend
• calculateT_() : BALL::BindingPocketProcessor
• calculateTDR() : BALL::QSAR::ClassificationValidation
• calculateTransferEnergy_() : BALL::GeneralizedBornModel
• calculateTransformation() : BALL::StructureMapper
• calculateTubePoints_() : BALL::VIEW::AddBackboneModel
• calculateVDWEnergy_() : BALL::VanDerWaals
• calculateVectors_() : BALL::VIEW::Camera
• calculateWeightedKernelMatrix() : BALL::QSAR::Kernel
• calculateWeightedSensitivity() : BALL::QSAR::ClassificationValidation
• calculateWeights() : BALL::QSAR::ALLModel , BALL::QSAR::KNNModel
• calculateXX() : BALL::QSAR::ALLModel
• calculateXY() : BALL::QSAR::ALLModel
• Camera() : BALL::VIEW::Camera
• canBeCopied() : BALL::ReducedSurface , BALL::TriangulatedSurface
• cancelPressed() : BALL::VIEW::DockDialog , BALL::VIEW::SnapshotVisualisationDialog
• canHandle() : BALL::PluginHandler , BALL::VIEW::MolecularFileDialog , BALL::VIEW::ModularWidget , BALL::VIEW::InputDevPluginHandler , BALL::VIEW::DatasetControl , BALL::VIEW::PyWidget , BALL::VIEW::TestFramework
• CannotWrite() : BALL::File::CannotWrite
• CanonicalMD() : BALL::CanonicalMD
• canonizeName_() : BALL::DNAMutator
• canonizePath() : BALL::FileSystem
• canUseMeshShortcut_() : BALL::VIEW::ColorProcessor , BALL::VIEW::ResidueNumberColorProcessor , BALL::VIEW::ChainColorProcessor , BALL::VIEW::MoleculeColorProcessor , BALL::VIEW::ResidueNameColorProcessor , BALL::VIEW::CustomColorProcessor , BALL::VIEW::SecondaryStructureColorProcessor , BALL::VIEW::ResidueTypeColorProcessor
• CanvasWidget() : BALL::VIEW::CanvasWidget
• capacity() : BALL::PDBRecords
• cappingColorPressed() : BALL::VIEW::StageSettings
• cappingEnabled() : BALL::VIEW::ClippingPlane
• carlsonEllipticalIntegral1_() : BALL::JohnsonBoveyShiftProcessor
• carlsonEllipticalIntegral2_() : BALL::JohnsonBoveyShiftProcessor
• cartoonDNABaseRadiusChanged() : BALL::VIEW::ModelSettingsDialog
• cartoonDNAHelixRadiusChanged() : BALL::VIEW::ModelSettingsDialog
• cartoonDNALadderRadiusChanged() : BALL::VIEW::ModelSettingsDialog
• cartoonHelixRadiusChanged() : BALL::VIEW::ModelSettingsDialog
• cartoonStrandArrowWidthChanged() : BALL::VIEW::ModelSettingsDialog
• cartoonStrandHeightChanged() : BALL::VIEW::ModelSettingsDialog
• cartoonStrandWidthChanged() : BALL::VIEW::ModelSettingsDialog
• cartoonTubeRadiusChanged() : BALL::VIEW::ModelSettingsDialog
• CCP4File() : BALL::CCP4File
• centerCamera() : BALL::VIEW::MolecularControl , BALL::VIEW::MolecularStructure
• centerData() : BALL::QSAR::QSARData
• centering() : BALL::QSAR::Statistics
• centerOfProbe() : BALL::RSComputer
• CESelementConnectionPredicate() : BALL::GAFFCESParser::CESelementConnectionPredicate
• CESelementPredicate() : BALL::GAFFCESParser::CESelementPredicate
• CESPredicate() : BALL::GAFFCESParser::CESPredicate
• CESwildcardsConnectionPredicate() : BALL::GAFFCESParser::CESwildcardsConnectionPredicate
• CESwildcardsPredicate() : BALL::GAFFCESParser::CESwildcardsPredicate
• Chain() : BALL::Chain
• ChainColorProcessor() : BALL::VIEW::ChainColorProcessor
• ChainIteratorTraits() : BALL::ChainIteratorTraits
• changeAllXToY_() : BALL::SecondaryStructureProcessor
• changeAtomElement_() : BALL::VIEW::EditableScene
• changeBondOrder_() : BALL::VIEW::EditableScene
• changedEditThreshold() : BALL::VIEW::RaytraceableContourSurfaceDialog
• changedNAMode_() : BALL::VIEW::ModelSettingsDialog
• changedRangeMax() : BALL::VIEW::RaytraceableContourSurfaceDialog
• changedRangeMin() : BALL::VIEW::RaytraceableContourSurfaceDialog
• changedRangeSteps() : BALL::VIEW::RaytraceableContourSurfaceDialog
• changeDrawingMode_() : BALL::VIEW::ModifyRepresentationDialog
• changeDrawingModeTransparencyChanged() : BALL::VIEW::ModifyRepresentationDialog
• changedSliderThreshold() : BALL::VIEW::RaytraceableContourSurfaceDialog
• changeElement_() : BALL::VIEW::EditableScene
• changeEvent() : BALL::Mainframe
• changeLock() : BALL::VIEW::ServerWidget
• changeMode_() : BALL::VIEW::EditSingleShortcut
• changeProteinOrientation_() : BALL::GeometricFit
• changeShortcut() : BALL::VIEW::ShortcutRegistry
• changeToUserHomeDir() : BALL::Directory
• ChannelFormat() : BALL::VIEW::ChannelFormat
• ChargeRuleProcessor() : BALL::ChargeRuleProcessor
• CharmmBend() : BALL::CharmmBend
• CharmmConfigurationDialog() : BALL::VIEW::CharmmConfigurationDialog
• CharmmEEF1() : BALL::CharmmEEF1
• CharmmFF() : BALL::CharmmFF
• CharmmImproperTorsion() : BALL::CharmmImproperTorsion
• CharmmNonBonded() : BALL::CharmmNonBonded
• CharmmStretch() : BALL::CharmmStretch
• CharmmTorsion() : BALL::CharmmTorsion
• chdir_() : BALL::Directory
• check() : BALL::SolventExcludedSurface
• checkActivityIDs() : BALL::QSAR::QSARData
• checkApplyButton_() : BALL::VIEW::GridVisualizationDialog , BALL::VIEW::ModifyRepresentationDialog
• checkAtomPositions() : BALL::ResidueChecker
• checkAtomType() : BALL::MMFF94
• checkCharge() : BALL::ResidueChecker
• checkCompleteness() : BALL::ResidueChecker
• checkDrawingPrecision_() : BALL::VIEW::DisplayProperties
• checkEdges_() : BALL::RingPerceptionProcessor
• checkforDiscreteY() : BALL::QSAR::QSARData
• checkGAFFProperties() : BALL::GAFFCESParser::APSMatcher
• checkGL() : BALL::VIEW::GLRenderWindow
• checkHeader() : BALL::XDRPersistenceManager , BALL::PersistenceManager , BALL::TextPersistenceManager
• checkInclude_() : BALL::VIEW::ModifyRepresentationDialog
• checkLoop() : BALL::VIEW::SnapshotVisualisationDialog
• checkMenu() : BALL::VIEW::DatasetController , BALL::VIEW::DisplayProperties , BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile , BALL::VIEW::LabelDialog , BALL::VIEW::MolecularFileDialog , BALL::VIEW::PubChemDialog , BALL::VIEW::UndoManagerDialog , BALL::VIEW::ModularWidget , BALL::VIEW::DatasetControl , BALL::VIEW::DockingController , BALL::VIEW::EditableScene , BALL::VIEW::FileObserver , BALL::VIEW::GeometricControl , BALL::VIEW::MolecularControl , BALL::VIEW::MolecularStructure , BALL::VIEW::PyWidget , BALL::VIEW::Scene , BALL::VIEW::TestFramework , BALL::VIEW::DemoTutorialDialog
• checkMenus() : BALL::VIEW::MainControl
• checkName() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkNoLoop() : BALL::VIEW::SnapshotVisualisationDialog
• checkObjectHeader() : BALL::PersistenceManager
• checkObjectPointerArrayHeader() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkObjectPointerArrayTrailer() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkObjectPointerHeader() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkObjectReferenceHeader() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkObjectTrailer() : BALL::PersistenceManager
• checkOverlap_() : BALL::SDGenerator
• checkPrimitiveHeader() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkPrimitiveTrailer() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkProbe() : BALL::RSComputer
• checkResidue() : BALL::VIEW::MolecularControl , BALL::VIEW::MolecularStructure
• checkRock() : BALL::VIEW::SnapshotVisualisationDialog
• checkStorableHeader() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkStorableTrailer() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkStreamHeader() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkStreamTrailer() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkTemplate() : BALL::ResidueChecker
• checkTrailer() : BALL::PersistenceManager , BALL::TextPersistenceManager , BALL::XDRPersistenceManager
• checkValidity() : BALL::ComposedEnergyProcessor
• ChemicalUnit() : BALL::NMRStarFile::MolecularSystem::ChemicalUnit
• ChemScoreMetal() : BALL::ChemScoreMetal
• CHGroup() : BALL::CHPI::CHGroup
• ChildCompositeIteratorTraits() : BALL::Composite::ChildCompositeIteratorTraits
• chooseAmberFF() : BALL::VIEW::MolecularStructure
• chooseCharmmFF() : BALL::VIEW::MolecularStructure
• chooseColor() : BALL::VIEW::ContourSurfaceDialog , BALL::VIEW::ColorButton
• chooseDCDFile() : BALL::VIEW::MolecularDynamicsDialog
• chooseFile() : BALL::VIEW::FileObserver
• chooseForceField() : BALL::VIEW::MolecularStructure
• chooseMMFF94() : BALL::VIEW::MolecularStructure
• chooseName_() : BALL::VIEW::PropertyEditor
• choosePressed() : BALL::VIEW::ModifyRepresentationDialog
• chooseSolventFile() : BALL::VIEW::AmberConfigurationDialog , BALL::VIEW::CharmmConfigurationDialog , BALL::VIEW::MMFF94ConfigurationDialog
• CIFFile() : BALL::CIFFile
• ClassificationModel() : BALL::QSAR::ClassificationModel
• ClassificationValidation() : BALL::QSAR::ClassificationValidation
• ClaverieParameter() : BALL::ClaverieParameter
• clean() : BALL::ReducedSurface , BALL::SolventExcludedSurface
• cleanContactFaces() : BALL::SolventExcludedSurface
• cleanEdges() : BALL::SolventExcludedSurface
• cleanSingularToricFace() : BALL::SolventExcludedSurface
• cleanSphericFaces() : BALL::SolventExcludedSurface
• cleanToricFace() : BALL::SolventExcludedSurface
• cleanToricFaces() : BALL::SolventExcludedSurface
• cleanUpNodes_() : BALL::ConnectedToPredicate
• cleanVertices() : BALL::SolventExcludedSurface
• clear() : BALL::ResidueTorsions , BALL::Templates , BALL::ShiftModel , BALL::ShiftModel1D , BALL::ShiftModel2D , BALL::ShiftModule , BALL::Spectrum< DataT, PeakT, PositionT > , BALL::ScoringComponent , BALL::ScoringFunction , BALL::ScoringTypes , BALL::BuriedPolar , BALL::CHPI , BALL::HydrogenBond , BALL::Lipophilic , BALL::ChemScoreMetal , BALL::NonpolarSolvation , BALL::PolarSolvation , BALL::RotationalEntropyLoss , BALL::VanDerWaals , BALL::SLICKEnergy , BALL::SLICKScore , BALL::ClaverieParameter , BALL::GeneralizedBornModel , BALL::Pair6_12InteractionEnergyProcessor , BALL::Pair6_12RDFIntegrator , BALL::PairExpInteractionEnergyProcessor , BALL::PairExpRDFIntegrator , BALL::PCMCavFreeEnergyProcessor , BALL::PierottiCavFreeEnergyProcessor , BALL::ReissCavFreeEnergyProcessor , BALL::SolventDescriptor , BALL::SolventParameter , BALL::UhligCavFreeEnergyProcessor , BALL::AssignBondOrderProcessor , BALL::AStarBondOrderStrategy , BALL::BondOrderAssignment , BALL::BondOrderAssignmentStrategy , BALL::BranchAndBoundBondOrderStrategy , BALL::FPTBondOrderStrategy , BALL::FPTBondOrderStrategy::DPBackTracking_ , BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_ , BALL::ILPBondOrderStrategy , BALL::KGreedyBondOrderStrategy , BALL::PartialBondOrderAssignment , BALL::ConnectedComponentsProcessor , BALL::Kekuliser , BALL::RadialDistributionFunction , BALL::RDFIntegrator , BALL::RDFParameter , BALL::RDFSection , BALL::ReducedSurface , BALL::RingAnalyser , BALL::RotamerLibrary , BALL::SDGenerator , BALL::SideChainPlacementProcessor , BALL::SmartsMatcher::RecStructCore_ , BALL::SmartsMatcher::RecStruct_ , BALL::SmartsParser , BALL::SolventAccessibleSurface , BALL::SolventExcludedSurface , BALL::TriangulatedSurface , BALL::Directory , BALL::File , BALL::Timer , BALL::VIEW::ColorExtension2 , BALL::VIEW::MultiColorExtension , BALL::VIEW::ColorHSV , BALL::VIEW::ColorRGBA , BALL::VIEW::ColorUnit , BALL::VIEW::ColorUnitHue , BALL::VIEW::Dataset , BALL::VIEW::Vertex , BALL::VIEW::Vertex2 , BALL::VIEW::ClippingPlane , BALL::VIEW::CompositeManager , BALL::VIEW::ConnectionObject , BALL::VIEW::GeometricObject , BALL::VIEW::MainControl , BALL::VIEW::ModularWidget , BALL::VIEW::Representation , BALL::VIEW::RepresentationManager , BALL::VIEW::ServerWidget , BALL::VIEW::ShortcutRegistry , BALL::VIEW::Camera , BALL::VIEW::Stage , BALL::VIEW::AtomBondModelBaseProcessor , BALL::VIEW::AddBackboneModel , BALL::VIEW::AddBallAndStickModel , BALL::VIEW::ColorProcessor , BALL::VIEW::HBondModelProcessor , BALL::VIEW::ModelProcessor , BALL::VIEW::AddSurfaceModel , BALL::VIEW::Box , BALL::VIEW::Disc , BALL::VIEW::Label , BALL::VIEW::Line , BALL::VIEW::Mesh , BALL::VIEW::MultiLine , BALL::VIEW::Point , BALL::VIEW::SimpleBox , BALL::VIEW::Sphere , BALL::VIEW::Tube , BALL::VIEW::TwoColoredLine , BALL::VIEW::TwoColoredTube , BALL::VIEW::GLDisplayList , BALL::VIEW::GLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer , BALL::VIEW::STLRenderer , BALL::VIEW::MeshBuffer , BALL::VIEW::VRMLRenderer , BALL::VIEW::GeometricControl , BALL::VIEW::PyWidget , BALL::VIEW::Scene , BALL::VIEW::SDWidget , BALL::LogStream , BALL::Client , BALL::Composite , BALL::MolecularInformation , BALL::MoleculeObjectCreator , BALL::Object , BALL::ObjectCreator , BALL::NamedProperty , BALL::PropertyManager , BALL::Selectable , BALL::PreciseTime , BALL::TimeStamp , BALL::Bit , BALL::BitVector , BALL::TContour< T > , BALL::TContourLine< T > , BALL::TContourSurface< T > , BALL::HashGridBox3< Item > , BALL::HashGrid3< Item > , BALL::HashSet< Key > , BALL::Options , BALL::Quadruple< T1, T2, T3, T4 > , BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType > , BALL::RegularExpression , BALL::String , BALL::Substring , BALL::Triple< T1, T2, T3 > , BALL::ComposedEnergyProcessor , BALL::EnergyProcessor , BALL::AmiraMeshFile , BALL::CCP4File , BALL::CIFFile::Item , BALL::CIFFile::SaveFrame , BALL::CIFFile::Datablock , BALL::DCDFile , BALL::DSN6File , BALL::INIFile , BALL::LineBasedFile , BALL::NMRStarFile::Sample::Component , BALL::NMRStarFile::Sample , BALL::NMRStarFile::EntryInformation , BALL::NMRStarFile::MonomericPolymer::HomologDB , BALL::NMRStarFile::MonomericPolymer , BALL::NMRStarFile::MolecularSystem::RelatedDB , BALL::NMRStarFile::MolecularSystem::ChemicalUnit , BALL::NMRStarFile::MolecularSystem , BALL::NMRStarFile::BALLToBMRBMapper , BALL::NMRStarFile , BALL::Parameters , BALL::ParameterSection , BALL::PDB::Residue , BALL::PDB::RecordCONECT , BALL::PDB::RecordCON06 , BALL::PDB::RecordCON061 , BALL::PDB::RecordCON062 , BALL::PDB::RecordCON063 , BALL::PDB::RecordCON064 , BALL::PDB::RecordHELIX , BALL::PDB::RecordMASTER , BALL::PDB::RecordSEQRES , BALL::PDB::RecordSHEET , BALL::PDB::RecordSSBOND , BALL::PDB::RecordTURN , BALL::PDB::BookKeeping , BALL::PDB::Structure , BALL::PDBFile , BALL::PDBInfo , BALL::PDBRecords , BALL::ResourceEntry , BALL::ResourceFile , BALL::TrajectoryFile , BALL::TRRFile , BALL::Atom , BALL::AtomContainer , BALL::Bond , BALL::Expression , BALL::ExpressionParser::SyntaxTree , BALL::ExpressionPredicate , BALL::ExpressionTree , BALL::NucleicAcid , BALL::Nucleotide , BALL::PDBAtom , BALL::Protein , BALL::Element , BALL::PTE_ , BALL::Residue , BALL::SecondaryStructure , BALL::Selector , BALL::ConnectedToPredicate , BALL::TAngle< T > , BALL::TBox3< T > , BALL::TCircle3< T > , BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits > , BALL::TLine3< T > , BALL::TMatrix4x4< T > , BALL::PiecewiseFunction , BALL::PiecewisePolynomial , BALL::TPlane3< T > , BALL::TQuaternion< T > , BALL::RombergIntegrator< Function, DataType > , BALL::TSimpleBox3< T > , BALL::TSphere3< T > , BALL::TSurface< T > , BALL::TVector2< T > , BALL::TVector3< T > , BALL::TVector4< T > , BALL::AmberFF , BALL::AmberNonBonded , BALL::GAFFCESParser::CESPredicate , BALL::CharmmFF , BALL::CharmmNonBonded , BALL::ForceField , BALL::PeriodicBoundary , BALL::RuleEvaluator , BALL::RuleProcessor , BALL::SnapShot , BALL::SnapShotManager , BALL::MMFF94 , BALL::MMFF94NonBonded , BALL::MMFF94ParametersBase , BALL::MMFF94AtomTypeEquivalences , BALL::MMFF94StretchParameters , BALL::MMFF94BendParameters , BALL::MMFF94StretchBendParameters , BALL::MMFF94TorsionParameters , BALL::MMFF94PlaneParameters , BALL::MMFF94VDWParameters , BALL::MMFF94ESParameters , BALL::MMFF94ChargeProcessor , BALL::AtomTypes , BALL::CharmmEEF1 , BALL::CosineTorsion , BALL::ForceFieldParameters , BALL::LennardJones , BALL::Potential1210 , BALL::QuadraticAngleBend , BALL::QuadraticBondStretch , BALL::QuadraticImproperTorsion
• clear_() : BALL::MOL2File , BALL::Atom , BALL::Bond , BALL::PDBAtom , BALL::VIEW::GeometricObject , BALL::VIEW::AddBackboneModel
• clearAtomGrid() : BALL::VIEW::ColorProcessor
• clearBonds() : BALL::GAMESSLogFile
• clearBuffer() : BALL::VIEW::MeshBuffer , BALL::SnapShotManager
• clearClipboard() : BALL::VIEW::MolecularControl
• clearComposites() : BALL::VIEW::AtomBondModelBaseProcessor , BALL::VIEW::AddSurfaceModel , BALL::VIEW::ModelProcessor
• clearData() : BALL::VIEW::MainControl
• clearEntries() : BALL::VIEW::AssignBondOrderResultsDialog , BALL::VIEW::PubChemDialog
• clearFields_() : BALL::VIEW::LightSettings
• clearGeometricObjects() : BALL::VIEW::Representation
• clearHistory_() : BALL::VIEW::PyWidget
• clearKeySequences() : BALL::VIEW::ShortcutRegistry
• clearLastPtr() : BALL::AutoDeletable
• clearLightSources() : BALL::VIEW::Stage
• clearMutations() : BALL::DNAMutator , BALL::Mutator
• clearNames_() : BALL::VIEW::GLRenderer
• clearNormals() : BALL::TSurface< T >
• clearParameters() : BALL::CIFFile , BALL::GAMESSDatFile
• clearParent_() : BALL::VIEW::ConnectionObject
• clearProperty() : BALL::PropertyManager
• clearRecordedAnimation() : BALL::VIEW::Scene
• clearScript() : BALL::VIEW::PyWidget
• clearSelection() : BALL::VIEW::MainControl
• clearSelector() : BALL::VIEW::MolecularControl
• ClearShiftProcessor() : BALL::ClearShiftProcessor
• clearStartupScript() : BALL::VIEW::PythonSettings
• clearStatusBarText_() : BALL::VIEW::MainControl
• clearSticks() : BALL::Spectrum< DataT, PeakT, PositionT >
• clearTriangles() : BALL::TSurface< T >
• clearUsedAtoms_() : BALL::VIEW::AtomBondModelBaseProcessor
• clearVertexBuffersFor() : BALL::VIEW::GLRenderer
• clearVertices() : BALL::TSurface< T >
• clicked() : BALL::VIEW::FDPBDialog
• Client() : BALL::Client
• ClippingDialog() : BALL::VIEW::ClippingDialog
• ClippingPlane() : BALL::VIEW::ClippingPlane
• clone() : BALL::Composite , BALL::VIEW::BoolEditorWidget , BALL::VIEW::IntEditorWidget , BALL::VIEW::UIntEditorWidget , BALL::VIEW::DoubleEditorWidget , BALL::VIEW::StringEditorWidget , BALL::VIEW::PropDeleteWidget , BALL::VIEW::FloatEditorWidget , BALL::VIEW::PDBInfoEditorWidget , BALL::VIEW::PropEditorWidget
• clone_() : BALL::Composite , BALL::ResourceEntry
• cloneBond() : BALL::Atom
• close() : BALL::ResourceFile , BALL::File
• close_pressed() : BALL::VIEW::PeptideDialog , BALL::VIEW::UndoManagerDialog
• closeClicked() : BALL::VIEW::DockResultDialog
• closeEvent() : BALL::VIEW::SnapshotVisualisationDialog , BALL::VIEW::MainControl
• clusterRings_() : BALL::RingAnalyser
• coarsePenalty() : BALL::PartialBondOrderAssignment
• collapseAll() : BALL::VIEW::MolecularControl
• collectAromaticAtoms_() : BALL::Kekuliser
• collectAtoms_() : BALL::ForceField
• collectBonds_() : BALL::MMFF94
• collectClasses_() : BALL::VIEW::HelpViewer
• collectHeteroAtomTypes() : BALL::MMFF94AtomTyper
• collectPositions() : BALL::VIEW::AddBackboneModel
• collectRecursive_() : BALL::VIEW::Representation
• collectRingBonds_() : BALL::VIEW::AddBallAndStickModel
• collectRings_() : BALL::MMFF94
• collectSystems_() : BALL::Kekuliser
• ColorButton() : BALL::VIEW::ColorButton
• colorByCustomColor_() : BALL::VIEW::ModifyRepresentationDialog
• colorByGrid_() : BALL::VIEW::ModifyRepresentationDialog
• ColorByGridProcessor() : BALL::VIEW::ColorByGridProcessor
• colorChanged() : BALL::VIEW::ColorButton
• ColorExtension2() : BALL::VIEW::ColorExtension2
• colorGeometricObject_() : BALL::VIEW::AtomDistanceColorProcessor
• ColorHSV() : BALL::VIEW::ColorHSV
• coloringMuteableByDisplayProperties() : BALL::VIEW::ModelInformation
• coloringOptionsPressed() : BALL::VIEW::DisplayProperties
• ColoringSettingsDialog() : BALL::VIEW::ColoringSettingsDialog
• coloringUpdateEnabled() : BALL::VIEW::Representation
• coloringUpdatesChanged() : BALL::VIEW::DisplayProperties
• ColorMap() : BALL::VIEW::ColorMap
• colorMeshFromGrid_() : BALL::VIEW::ColorProcessor , BALL::VIEW::AtomDistanceColorProcessor
• colorPressed() : BALL::VIEW::StageSettings , BALL::VIEW::LightSettings
• ColorProcessor() : BALL::VIEW::ColorProcessor
• ColorRGBA() : BALL::VIEW::ColorRGBA
• ColorTable() : BALL::VIEW::ColorTable
• ColorUnit() : BALL::VIEW::ColorUnit
• ColorUnitHue() : BALL::VIEW::ColorUnitHue
• columnCount() : BALL::VIEW::ShortcutTableModel
• ColumnIteratorTraits() : BALL::ColumnIteratorTraits< valuetype, mtraits >
• combine() : BALL::FPTBondOrderStrategy::Assignment_
• combineDatapoints() : BALL::MPISupport
• combineEachSolution_() : BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
• ComboBoxDelegate() : BALL::VIEW::ComboBoxDelegate
• Comparator() : BALL::Comparator< T >
• compare() : BALL::String , BALL::FPTBondOrderStrategy::DPConfig_ , BALL::FPTBondOrderStrategy::Assignment_ , BALL::String , BALL::Object , BALL::String , BALL::FPTBondOrderStrategy::DPJoinMapComparator_ , BALL::FPTBondOrderStrategy::BackTrackingState_
• Compare_() : BALL::VIEW::DockResultDialog::Compare_ , BALL::DockResult::Compare_ , BALL::VIEW::DockResultDialog::Compare_
• compareAscendingly_() : BALL::String
• compareChains_() : BALL::SDGenerator
• compareChildren_() : BALL::ExpressionTree
• compareDescendingly_() : BALL::String
• compareJoinTablePairs_() : BALL::FPTBondOrderStrategy
• compareTablePointerEntries_() : BALL::FPTBondOrderStrategy
• compilePattern() : BALL::VIEW::PythonHighlighter
• compilePattern_() : BALL::RegularExpression
• complementSelection() : BALL::VIEW::MainControl
• complementSelectionHelper_() : BALL::VIEW::MainControl
• completionSelected_() : BALL::VIEW::PyWidget
• Component() : BALL::NMRStarFile::Sample::Component
• ComponentFilter_() : BALL::TreeWidth< UndirectedGraph >::ComponentFilter_< ComponentMap >
• ComposedEnergyProcessor() : BALL::ComposedEnergyProcessor
• Composite() : BALL::Composite
• CompositeIteratorTraits() : BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits
• CompositeManager() : BALL::VIEW::CompositeManager
• CompositeMessage() : BALL::VIEW::CompositeMessage
• compositeProperties() : BALL::VIEW::MolecularControl
• CompositeProperties() : BALL::VIEW::CompositeProperties
• compositesAreLocked() : BALL::VIEW::MainControl
• compute() : BALL::ReducedSurface , BALL::SolventExcludedSurface , BALL::TriangulatedSES , BALL::Descriptor , BALL::RelPolarVdWSurface , BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_ , BALL::RelNegativePolarVdWSurface , BALL::NumberOfHydrogenBondAcceptors , BALL::NumberOfHydrogenBondDonors , BALL::NumberOfHydrophobicAtoms , BALL::RelNumberOfRotatableSingleBonds , BALL::VertexAdjacency , BALL::ZagrebIndex , BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound > , BALL::AtomInformationContent , BALL::RelNumberOfRotatableBonds , BALL::VertexAdjacencyEquality , BALL::RelPositiveVdWSurface , BALL::RelNegativeVdWSurface , BALL::RelPositivePolarVdWSurface , BALL::RelHydrophobicVdWSurface , BALL::SolventAccessibleSurface , BALL::TriangulatedSAS
• compute_() : BALL::SecondaryStructureProcessor
• computeAdjacencyMatrix_() : BALL::SDGenerator
• computeAllDescriptors() : BALL::ConnectivityBase , BALL::PartialChargeBase , BALL::SimpleBase , BALL::SurfaceBase
• computeAllMoments() : BALL::Spectrum< DataT, PeakT, PositionT >
• computeAngularDemand_() : BALL::SDGenerator
• computeAngularSeparation_() : BALL::SDGenerator
• computeBitSize() : BALL::VIEW::PixelFormat
• computeBondOrders() : BALL::VIEW::EditableScene
• computeByteSize() : BALL::VIEW::PixelFormat
• computeCentre_() : BALL::CHPI::AromaticRing
• computeCFS_() : BALL::SDGenerator
• computeClaverieParameters() : BALL::PairExpInteractionEnergyProcessor
• computeCoreCFS_() : BALL::SDGenerator
• computeDefaultPressed() : BALL::VIEW::StageSettings
• computeDistance() : BALL::PeptideCapProcessor
• computeEnergyDifference_() : BALL::PolarSolvation
• computeESEnergy_() : BALL::PolarSolvation
• computeESInteractionEnergy_() : BALL::PolarSolvation
• computeFermiParameters_() : BALL::FermiBaseFunction
• computeForgetBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
• computeFullCycle_() : BALL::PolarSolvation
• computeHuInvariants() : BALL::Spectrum< DataT, PeakT, PositionT >
• computeHuInvariantsDifferences() : BALL::Spectrum< DataT, PeakT, PositionT >
• computeIntroduceBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
• computeIsoContourSurface() : BALL::VIEW::RegularData3DController
• computeJoinBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
• computeLeafIntroduceBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
• computeNextSolution() : BALL::BondOrderAssignmentStrategy , BALL::FPTBondOrderStrategy , BALL::AssignBondOrderProcessor , BALL::BranchAndBoundBondOrderStrategy , BALL::AStarBondOrderStrategy , BALL::ILPBondOrderStrategy , BALL::KGreedyBondOrderStrategy , BALL::VIEW::AssignBondOrderResultsDialog
• computeNormalVector_() : BALL::CHPI::AromaticRing
• computeProperties_() : BALL::EmpiricalHSShiftProcessor::PropertiesForShift_
• computeRootBag() : BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
• computeSettingsFromModelDistance() : BALL::VIEW::StereoSettingsDialog
• computeShelleyPriorities_() : BALL::SDGenerator
• computeSize() : BALL::VIEW::FrameBufferFormat
• computeSphereTesselation_() : BALL::NumericalSAS
• computeTilingSetup_() : BALL::VIEW::TilingRenderer
• computeTopology() : BALL::TContourSurface< T >::Cube
• computeTransformation() : BALL::RMSDMinimizer
• computeTreeWidth() : BALL::TreeWidth< UndirectedGraph >
• computeTriangles() : BALL::TContourSurface< T >
• computeVirtualHydrogens_() : BALL::AssignBondOrderProcessor
• ComputingData_() : BALL::FPTBondOrderStrategy::ComputingData_
• ConfigurationReadingError() : BALL::QSAR::Exception::ConfigurationReadingError
• ConformationSet() : BALL::ConformationSet
• ConjugateGradientMinimizer() : BALL::ConjugateGradientMinimizer
• connect() : BALL::Client
• connectChilds_() : BALL::VIEW::PTEDialog
• ConnectedComponentsProcessor() : BALL::ConnectedComponentsProcessor
• ConnectedToPredicate() : BALL::ConnectedToPredicate
• ConnectionObject() : BALL::VIEW::ConnectionObject
• connectionRequested() : BALL::TCPServer
• ConnectivityBase() : BALL::ConnectivityBase
• ConstBidirectionalFilterIterator() : BALL::ConstBidirectionalFilterIterator< Predicate, IteratorBidirectional >
• ConstBidirectionalIterator() : BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
• ConstForwardFilterIterator() : BALL::ConstForwardFilterIterator< Predicate, IteratorForward >
• ConstForwardIterator() : BALL::ConstForwardIterator< Container, DataType, Position, Traits >
• ConstRandomAccessFilterIterator() : BALL::ConstRandomAccessFilterIterator< Predicate, IteratorRandomAccess >
• ConstRandomAccessIterator() : BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
• ConstReverseIterator() : BALL::ConstReverseIterator< Container, DataType, Position, Traits >
• construct() : BALL::Peptides::PeptideBuilder
• constructExpressionTree_() : BALL::Expression
• constructRingSystem_() : BALL::SDGenerator
• containsAtomChilds_() : BALL::MOL2File
• containsSelection() : BALL::Composite
• contentsDragEnterEvent() : BALL::VIEW::PyWidget , BALL::VIEW::DragLogView
• contentsDragLeaveEvent() : BALL::VIEW::DragLogView
• contentsDropEvent() : BALL::VIEW::DragLogView , BALL::VIEW::PyWidget
• contextMenuEvent() : BALL::VIEW::DockableRegularData1DWidget , BALL::VIEW::DockableRegularData2DWidget
• ContourSurfaceDialog() : BALL::VIEW::ContourSurfaceDialog
• contractEdge() : BALL::TreeWidthImplementation< EditableGraph >::MinorMinWidthReducer
• ControlSelectionMessage() : BALL::VIEW::ControlSelectionMessage
• convertBrick_() : BALL::DSN6File
• convertName() : BALL::Peptides::NameConverter
• convertObject() : BALL::MoleculeObjectCreator , BALL::ObjectCreator
• convertToFullAssignment() : BALL::PartialBondOrderAssignment
• convertToGaussian() : BALL::Spectrum< DataT, PeakT, PositionT >
• convertToLorentzian() : BALL::Spectrum< DataT, PeakT, PositionT >
• convertToReal_() : BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
• coordinateSystemEnabled() : BALL::VIEW::Stage
• copy() : BALL::VIEW::MolecularControl , BALL::File , BALL::ReducedSurface , BALL::TriangulatedSurface
• copyData() : BALL::QSAR::Model
• copyDescriptorIDs() : BALL::QSAR::Model
• copyTo() : BALL::File
• correct() : BALL::RSComputer
• correctASUPositions_() : BALL::CrystalGenerator
• correctEdges() : BALL::ReducedSurface
• correctProbePosition() : BALL::RSComputer
• CosineTorsion() : BALL::CosineTorsion
• coulombIntegralApproximation_() : BALL::GeneralizedBornModel
• count() : BALL::Composite
• countAtomContainers() : BALL::Residue , BALL::AtomContainer , BALL::Nucleotide
• countAtoms() : BALL::AtomContainer , BALL::System
• countBondOrders() : BALL::AddHydrogenProcessor
• countBonds() : BALL::Atom , BALL::AtomContainer
• countChains() : BALL::Protein , BALL::System
• countChildren() : BALL::ResourceEntry
• countComponents() : BALL::ForceField
• countDescendants() : BALL::Composite , BALL::ResourceEntry
• countDescendants_() : BALL::Composite
• countDirectories() : BALL::Directory
• countEdges() : BALL::SmartsParser::SPNode
• countFields() : BALL::String
• countFieldsQuoted() : BALL::String
• countFiles() : BALL::Directory
• countFragments() : BALL::System
• countFragments_() : BALL::StructureMapper
• countHits_() : BALL::FragmentDB::NormalizeNamesProcessor
• countInstances_() : BALL::Embeddable
• countInterBonds() : BALL::AtomContainer
• countIntraBonds() : BALL::AtomContainer
• countItems() : BALL::VIEW::MolecularControl , BALL::Directory
• countMolecules() : BALL::System
• countNamedProperties() : BALL::PropertyManager
• countNonEmptyBoxes() : BALL::HashGrid3< Item >
• countNucleicAcids() : BALL::System
• countNucleotides() : BALL::System , BALL::NucleicAcid
• countPDBAtoms() : BALL::Protein , BALL::Chain , BALL::SecondaryStructure , BALL::Residue
• countPiElectrons_() : BALL::AromaticityProcessor
• countProperties() : BALL::SmartsParser::SPAtom , BALL::PropertyManager
• countProteins() : BALL::System
• countRealValences() : BALL::SmartsParser::SPAtom , BALL::SmilesParser::SPAtom
• countRecord() : BALL::PDBFile
• countRecordFields() : BALL::PDBFile
• countRecords() : BALL::PDBFile
• countResidues() : BALL::Chain , BALL::Protein , BALL::System , BALL::SecondaryStructure
• countSecondaryStructures() : BALL::System , BALL::Protein , BALL::Chain
• countSubexpressions() : BALL::RegularExpression
• countValue() : BALL::BitVector
• countVariants() : BALL::Enumerator< Container, SiteIterator, Variant >
• create() : BALL::Factory< T > , BALL::QSAR::ModelFactory< T > , BALL::Directory , BALL::String
• create6Ring_() : BALL::VIEW::AddCartoonModel
• createAtom() : BALL::SmilesParser , BALL::SmartsParser
• createAtomGrid() : BALL::VIEW::ColorProcessor
• createBiCubicSpline() : BALL::CubicSpline2D
• createBond() : BALL::Bond , BALL::SmilesParser , BALL::Atom
• createBond_() : BALL::VIEW::EditableScene
• createBonds() : BALL::SmilesParser
• createBoxes_() : BALL::VIEW::GLRenderer
• createColorProcessor() : BALL::VIEW::ColoringSettingsDialog
• createCombination() : BALL::Enumerator< Container, SiteIterator, Variant >
• createConcaveEdge() : BALL::SESComputer
• createContourLine() : BALL::TContourLine< T >
• createConvexEdge() : BALL::SESComputer
• createCoordinateSystem() : BALL::VIEW::Scene
• createCoordinateSystem_() : BALL::VIEW::Scene
• createCoordinateSystemAtOrigin() : BALL::VIEW::Scene
• createDisk() : BALL::TriangulatedSurface
• createDotBox_() : BALL::VIEW::GLRenderer
• createDottedSphere_() : BALL::VIEW::GLRenderer
• createDoubleRing_() : BALL::VIEW::AddCartoonModel
• createEdge() : BALL::SolventAccessibleSurface
• createEditor() : BALL::VIEW::ComboBoxDelegate
• createEditorWidget_() : BALL::VIEW::PropertyEditor
• createEntries() : BALL::VIEW::AssignBondOrderResultsDialog
• createEvaluationMethod() : BALL::VIEW::DockingController
• createFace() : BALL::SolventAccessibleSurface
• createFieldLine_() : BALL::VIEW::FieldLineCreator
• createFinalString() : BALL::UCK
• createFPSInfo_() : BALL::VIEW::Scene
• createFreeEdge() : BALL::RSComputer
• createFreeToricFace() : BALL::SESComputer
• createGeometricObjects() : BALL::VIEW::AtomBondModelBaseProcessor , BALL::VIEW::AddBallAndStickModel , BALL::VIEW::AddBackboneModel , BALL::VIEW::ModelProcessor , BALL::VIEW::AddSurfaceModel , BALL::VIEW::LabelModel
• createGridFromCameraDistance() : BALL::VIEW::MolecularStructure
• createGridFromDistance() : BALL::VIEW::MolecularStructure
• createHashGrid() : BALL::SASTriangulator
• createHelix_() : BALL::VIEW::AddCartoonModel
• createHistogramGrid() : BALL::VIEW::RegularData3DController
• createHotkey() : BALL::VIEW::Hotkey
• createKernel1() : BALL::QSAR::ModelFactory< T >
• createKernel2() : BALL::QSAR::ModelFactory< T >
• createLineBox_() : BALL::VIEW::GLRenderer
• createLines() : BALL::VIEW::FieldLineCreator
• createMap() : BALL::VIEW::ColorMap
• createMapJet() : BALL::VIEW::ColorMap
• createMapping() : BALL::NMRStarFile::BALLToBMRBMapper
• createMenuEntries() : BALL::VIEW::TrajectoryController , BALL::VIEW::DockResultController , BALL::VIEW::RegularData3DController , BALL::VIEW::RaytraceableGridController , BALL::VIEW::DatasetController , BALL::VIEW::VectorGridController
• createMenuHelpEntry_() : BALL::VIEW::PyWidget
• createModel_() : BALL::VIEW::AddBackboneModel , BALL::VIEW::AddCartoonModel
• createModelProcessor() : BALL::VIEW::ModelSettingsDialog
• createModule_() : BALL::ShiftModel
• createMolecule_() : BALL::VIEW::EditableScene
• createMultipleLabels_() : BALL::VIEW::LabelDialog
• createNewBool_() : BALL::VIEW::PropertyEditor
• createNewClippingPlane() : BALL::VIEW::GeometricControl
• createNewDouble_() : BALL::VIEW::PropertyEditor
• createNewFloat_() : BALL::VIEW::PropertyEditor
• createNewInt_() : BALL::VIEW::PropertyEditor
• createNewMolecule() : BALL::VIEW::EditableScene
• createNewNode_() : BALL::ConnectedToPredicate
• createNewString_() : BALL::VIEW::PropertyEditor
• createNewTriangles() : BALL::SASTriangulator
• createNewUInt_() : BALL::VIEW::PropertyEditor
• createNonBondedList_() : BALL::VanDerWaals
• createObject() : BALL::PersistenceManager
• createOneLabel_() : BALL::VIEW::LabelDialog
• createParameters() : BALL::QSAR::LibsvmModel
• createPeak_() : BALL::ShiftModel2D
• createPlanes() : BALL::SASTriangulator
• createPlot() : BALL::VIEW::RegularData2DWidget , BALL::VIEW::RegularData1DWidget
• createPoints() : BALL::SASTriangulator
• createProblem() : BALL::QSAR::LibsvmModel
• createRaytraceableGrid() : BALL::VIEW::RegularData3DController
• createRepresentation() : BALL::VIEW::DisplayProperties , BALL::VIEW::RepresentationManager , BALL::VIEW::DisplayProperties , BALL::VIEW::MolecularControl
• createRepresentation_() : BALL::VIEW::MolecularControl
• CreateRepresentationMessage() : BALL::VIEW::CreateRepresentationMessage
• createRepresentationMode() : BALL::VIEW::DisplayProperties
• createResidue_() : BALL::Peptides::PeptideBuilder
• createRibbon_() : BALL::VIEW::AddBackboneModel
• createScript_() : BALL::VIEW::PyWidget
• createSimpleNucleicAcid_() : BALL::VIEW::AddCartoonModel
• createSingularVertex() : BALL::SESComputer
• createSolidBox_() : BALL::VIEW::GLRenderer
• CreateSpectrumProcessor() : BALL::CreateSpectrumProcessor
• createSphere() : BALL::VIEW::RegularData3DController
• createSpheres_() : BALL::VIEW::GLRenderer
• createSphericFace() : BALL::SESComputer
• createSpline() : BALL::CubicSpline1D
• createStrand_() : BALL::VIEW::AddCartoonModel
• createTemporaryFilename() : BALL::File
• createTexture() : BALL::VIEW::GLRenderWindow
• createTextureFromGrid() : BALL::VIEW::GLRenderer
• createToricFace() : BALL::SESComputer
• createTriangleAndEdges() : BALL::SESTriangulator
• createTrivialMapping() : BALL::NMRStarFile::BALLToBMRBMapper
• createTube() : BALL::TriangulatedSurface
• createTube_() : BALL::VIEW::AddBackboneModel
• createTubeHelix_() : BALL::VIEW::AddCartoonModel
• createTubes_() : BALL::VIEW::GLRenderer
• createVectorGrid() : BALL::VIEW::RegularData3DController
• createVertex() : BALL::SESComputer , BALL::SolventAccessibleSurface
• createVoid() : BALL::Factory< T >
• createWatsonCrickModel_() : BALL::VIEW::AddCartoonModel
• crossValidation() : BALL::QSAR::Validation , BALL::QSAR::RegressionValidation , BALL::QSAR::ClassificationValidation , BALL::QSAR::RegressionValidation
• CrystalGenerator() : BALL::CrystalGenerator
• CrystalInfo() : BALL::CrystalInfo
• CTPNode() : BALL::ConnectedToPredicate::CTPNode
• Cube() : BALL::TContourSurface< T >::Cube
• CubicFunction() : BALL::CubicFunction< Function, DataType >
• CubicSpline1D() : BALL::CubicSpline1D
• CubicSpline2D() : BALL::CubicSpline2D
• CUDAError() : BALL::Exception::CUDAError
• currentEntry() : BALL::VIEW::Preferences
• currentPage() : BALL::VIEW::Preferences
• currentStackPage() : BALL::VIEW::PreferencesEntry
• CustomColorProcessor() : BALL::VIEW::CustomColorProcessor
• customColorTransparencyChanged() : BALL::VIEW::ModifyRepresentationDialog
• customEvent() : BALL::VIEW::Scene
• cut() : BALL::TriangulatedSurface , BALL::VIEW::MolecularControl
• cycleDFS_() : BALL::RotationalEntropyLoss
• cys_pressed() : BALL::VIEW::PeptideDialog