Here is a list of all class members with links to the classes
they belong to:
- d :
BALL::TLine3< T > ,
BALL::BindingPocketProcessor::Sphere_
- D_1_ :
BALL::ConjugateGradientMinimizer
- D_4_ :
BALL::ConjugateGradientMinimizer
- dashed_bonds_ :
BALL::VIEW::AddBallAndStickModel
- dashedBondsEnabled() :
BALL::VIEW::AddBallAndStickModel
- dat_ :
BALL::Bruker2DFile
- data :
BALL::HashGridBox3< Item > ,
BALL::VIEW::ShortcutTableModel
- Data() :
BALL::ResidueTorsions::Data
- data :
BALL::CIFFile::Datablock
- Data() :
BALL::ResidueTorsions::Data
- data :
BALL::GAMESSDatFile::block ,
BALL::QSAR::ValidationConfiguration ,
BALL::QSAR::PredictionConfiguration ,
BALL::QSAR::Model ,
BALL::VIEW::FrameBuffer ,
BALL::VIEW::PluginModel
- data_ :
BALL::NamedProperty ,
BALL::TContourLine< T > ,
BALL::TRegularData1D< ValueType > ,
BALL::TRegularData2D< ValueType > ,
BALL::TRegularData3D< ValueType > ,
BALL::MMFF94AtomTypes ,
BALL::Spectrum< DataT, PeakT, PositionT > ,
BALL::NodeItem< Node, Edge > ,
BALL::EdgeItem< Node, Edge > ,
BALL::BinaryFileAdaptor< T > ,
BALL::VIEW::RegularData1DWidget ,
BALL::VIEW::RegularData2DWidget
- data_file :
BALL::QSAR::FeatureSelectionConfiguration ,
BALL::QSAR::ModelConfiguration
- data_folder_ :
BALL::PartialChargeBase ,
BALL::PartialChargeProcessor ,
BALL::QSAR::QSARData ,
BALL::SimpleBase
- dataAdress_ :
BALL::TFFT1D< ComplexTraits > ,
BALL::TFFT2D< ComplexTraits > ,
BALL::TFFT3D< ComplexTraits >
- database :
BALL::PDB::RecordSEQADV
- datablocks_ :
BALL::CIFFile
- datablocks_hash_ :
BALL::CIFFile
- DataContainer :
BALL::HashGridBox3< Item >
- Datacontent() :
BALL::CIFFile::Datacontent
- dataitem :
BALL::CIFFile::Datacontent
- DataIterator :
BALL::HashGridBox3< Item >
- DataIteratorPosition :
BALL::HashGridBox3< Item >
- DataIteratorTraits :
BALL::HashGridBox3< Item > ,
BALL::HashGridBox3< Item >::DataIteratorTraits
- dataLength_ :
BALL::TFFT2D< ComplexTraits > ,
BALL::TFFT3D< ComplexTraits >
- Dataset() :
BALL::VIEW::Dataset
- dataset_ :
BALL::VIEW::DatasetMessage
- dataset_to_item_ :
BALL::VIEW::DatasetController
- dataset_type_ :
BALL::VIEW::DatasetMessage
- DatasetControl :
BALL::VIEW::DatasetController ,
BALL::VIEW::DatasetControl
- DatasetController() :
BALL::VIEW::DatasetController
- DatasetMessage() :
BALL::VIEW::DatasetMessage
- DataType :
BALL::BaseFilterIterator< Predicate, IteratorBase >
,
BALL::ConstBidirectionalFilterIterator< Predicate,
IteratorBidirectional > ,
BALL::BidirectionalFilterIterator< Predicate,
IteratorBidirectional > ,
BALL::ConstForwardFilterIterator< Predicate,
IteratorForward > ,
BALL::ForwardFilterIterator< Predicate, IteratorForward
> ,
BALL::ConstRandomAccessFilterIterator< Predicate,
IteratorRandomAccess > ,
BALL::Spectrum< DataT, PeakT, PositionT >
- date :
BALL::PDB::RecordSPRSDE
- Db :
BALL::Element
- db_ :
BALL::DNAMutator
- db_id_code :
BALL::PDB::RecordSEQADV
- db_res :
BALL::PDB::RecordSEQADV
- db_seq :
BALL::PDB::RecordSEQADV
- dc_ :
BALL::MMFF94NonBonded
- DC_SOLUTE :
BALL::GeneralizedBornModel::Option ,
BALL::GeneralizedBornModel::Default
- dc_solute_ :
BALL::GeneralizedBornModel::GBParameters ,
BALL::GeneralizedBornModel
- DC_SOLVENT :
BALL::GeneralizedBornModel::Option ,
BALL::GeneralizedBornModel::Default
- dc_solvent_ :
BALL::GeneralizedBornModel::GBParameters ,
BALL::GeneralizedBornModel
- dcd_file_ :
BALL::VIEW::SimulationThread
- DCDFile() :
BALL::DCDFile
- deactivate() :
BALL::BALLPlugin ,
BALL::TCPServer ,
BALL::TCPServerThread ,
BALL::VIEW::ServerWidget
- DEBYE :
BALL::FDPB::Boundary
- decodeBase64() :
BALL::String
- DEFAULT :
BALL::VIEW::DockingController ,
BALL::VIEW::EditableScene::EditOperation
- default_color_ :
BALL::VIEW::ColorProcessor ,
BALL::VIEW::ColorButton
- DEFAULT_COLOR_FOR_OUTSIDE_COLORS :
BALL::VIEW::InterpolateColorProcessor
- default_communicator_ :
BALL::MPISupport
- default_correlation_cutoff :
BALL::QSAR::Registry
- DEFAULT_FRAGMENT_DB :
BALL::RotamerLibrary
- default_gridsearch_par1_start :
BALL::QSAR::Registry
- default_gridsearch_par2_start :
BALL::QSAR::Registry
- default_gridsearch_recursion :
BALL::QSAR::Registry
- default_gridsearch_steps :
BALL::QSAR::Registry
- default_gridsearch_stepwidth :
BALL::QSAR::Registry
- default_hydrogen_target_nucleus_factor_ :
BALL::HaighMallionShiftProcessor
- default_k :
BALL::QSAR::Registry
- default_kernel_par1 :
BALL::QSAR::Registry
- default_kernel_par2 :
BALL::QSAR::Registry
- DEFAULT_LIBRARY :
BALL::RotamerLibrary
- default_lights_ :
BALL::VIEW::LightSettings
- default_nested_folds :
BALL::QSAR::Registry
- default_no_boostrap_samples :
BALL::QSAR::Registry
- default_no_opt_steps_ :
BALL::QSAR::Model
- default_no_permutations :
BALL::QSAR::Registry
- default_num_steps_ :
BALL::DNAMutator
- default_page_ :
BALL::VIEW::HelpViewer
- default_peak_ :
BALL::Experiment< PeakListType >
- DEFAULT_PROCESSOR :
BALL::Composite
- default_rbf_par :
BALL::QSAR::Registry
- default_standard_ :
BALL::FragmentDB
- DEFAULT_UNARY_PREDICATE :
BALL::Composite
- default_valdition_fraction :
BALL::QSAR::Registry
- default_value_ :
BALL::CubicSpline1D ,
BALL::CubicSpline2D
- default_values_ :
BALL::VIEW::PreferencesEntry
- default_visible_ :
BALL::VIEW::ModularWidget
- defaultAssign_() :
BALL::Enumerator< Container, SiteIterator, Variant
>
- defaultsPressed() :
BALL::VIEW::LightSettings
- DEG_PER_RAD :
BALL::Constant
- DEG_PHI :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- DEG_PSI :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- DEG_THETA :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- DEGREE :
BALL::SmartsParser::SPAtom
- degree_ :
BALL::PiecewisePolynomial
- DEGREE_INTERVAL :
BALL::GeometricFit::Option ,
BALL::GeometricFit::Default
- delegate_ :
BALL::VIEW::HotkeyTable
- deletable_ :
BALL::VIEW::Message
- delete_action_ :
BALL::VIEW::MainControl
- delete_buffer_ :
BALL::LogStream
- DELETE_ENTRY :
BALL::VIEW::MolecularControl
- DELETE_EXISTING_BONDS :
BALL::BuildBondsProcessor::Option ,
BALL::BuildBondsProcessor::Default
- delete_force_field_ :
BALL::ForceFieldEvaluation
- delete_id_ :
BALL::VIEW::MolecularControl
- DELETE_OVERESTIMATED_BONDS :
BALL::BuildBondsProcessor::Option ,
BALL::BuildBondsProcessor::Default
- deleteAtom_() :
BALL::VIEW::EditableScene
- deleteBond_() :
BALL::VIEW::EditableScene
- deleteBuckets_() :
BALL::HashSet< Key >
- deleteChildrenList_() :
BALL::Composite
- deleteClicked() :
BALL::VIEW::MainControl
- deleteColumn_() :
BALL::VIEW::DockResultDialog
- deleteCurrentItems() :
BALL::VIEW::DatasetControl ,
BALL::VIEW::GenericControl ,
BALL::VIEW::GeometricControl ,
BALL::VIEW::MolecularControl
- deleteDataset() :
BALL::VIEW::DatasetController
- deleteDataset_() :
BALL::VIEW::DatasetController ,
BALL::VIEW::RegularData3DController ,
BALL::VIEW::TrajectoryController ,
BALL::VIEW::DockResultController ,
BALL::VIEW::VectorGridController ,
BALL::VIEW::RaytraceableGridController
- deleteDatasets() :
BALL::VIEW::DatasetController
- deleteDescriptorIDs() :
BALL::QSAR::Model
- deleteEdge() :
BALL::TMolecularGraph< Node, Edge >
- deleteEdge_() :
BALL::NodeItem< Node, Edge >
- deleteEntry() :
BALL::ResourceEntry
- deleteEntryArray() :
BALL::ResourceEntry
- deleteIsolatedEdges() :
BALL::TriangulatedSurface
- deleteIsolatedPoints() :
BALL::TriangulatedSurface
- deleteLine() :
BALL::INIFile
- deleteNode() :
BALL::TMolecularGraph< Node, Edge >
- deleteNode_() :
BALL::HashSet< Key >
- deleteOverestimatedBonds_() :
BALL::BuildBondsProcessor
- deleteRotamer() :
BALL::ResidueRotamerSet
- deleteRotamers() :
BALL::ResidueRotamerSet
- deleteScoring() :
BALL::DockResult
- deleteSection() :
BALL::INIFile
- deleteSimilarFaces() :
BALL::ReducedSurface
- deleteSmallSingularToricFace() :
BALL::SolventExcludedSurface
- deleteSmallToricFace() :
BALL::SolventExcludedSurface
- deleteTexture() :
BALL::VIEW::GLRenderWindow
- deleteVariants() :
BALL::Enumerator< Container, SiteIterator, Variant
>
- DELIMITER_TAG :
BALL::KCFFile
- DELOCALIZED_BOND :
BALL::GAFFCESParser::APSMatcher
- DELOCALIZED_BOND_TO_PARENT :
BALL::GAFFCESParser::APSMatcher
- DELTA :
BALL::GeneralizedBornModel::Option ,
BALL::GeneralizedBornModel::Default
- delta :
BALL::FragmentDB::BuildBondsProcessor::Connection
- delta_ :
BALL::GeneralizedBornModel::GBParameters ,
BALL::GeneralizedBornModel
- delta_r :
BALL::MMFF94StretchBend::Stretch
- delta_theta :
BALL::MMFF94StretchBend::Bend
- demo_action_ :
BALL::VIEW::DemoTutorialDialog
- demo_mode_ :
BALL::VIEW::DemoTutorialDialog
- DemoTutorialDialog() :
BALL::VIEW::DemoTutorialDialog
- Density() :
BALL::Density
- density_ :
BALL::SurfaceProcessor ,
BALL::TriangulatedSAS ,
BALL::TriangulatedSES ,
BALL::TriangulatedSurface
- DEPOSITED :
BALL::SDGenerator
- deposition_date :
BALL::PDB::RecordHEADER
- depositPFU_() :
BALL::SDGenerator
- depth_ :
BALL::TBox3< T > ,
BALL::SmartsMatcher ,
BALL::UCK
- DEPTH_CHANNEL :
BALL::VIEW::ChannelFormat
- depth_vector_ :
BALL::TBox3< T >
- description :
BALL::VIEW::PubChemDialog::ParsedResult_ ,
BALL::VIEW::EditableScene::EditOperation
- descriptions_ :
BALL::VIEW::AssignBondOrderResultsDialog ,
BALL::VIEW::PubChemDialog
- Descriptor() :
BALL::Descriptor
- descriptor_IDs_ :
BALL::QSAR::Model
- descriptor_matrix :
BALL::QSAR::RegressionValidation::BackupData
- descriptor_matrix_ :
BALL::QSAR::QSARData ,
BALL::QSAR::Model
- descriptor_names_ :
BALL::QSAR::Model
- descriptor_source_model :
BALL::QSAR::ModelConfiguration
- descriptor_transformations_ :
BALL::QSAR::Model ,
BALL::QSAR::QSARData
- DESELECT :
BALL::VIEW::MolecularControl
- deselect() :
BALL::Composite ,
BALL::Selectable ,
BALL::VIEW::MolecularControl
- deselect_() :
BALL::Composite ,
BALL::VIEW::EditableScene
- deselect_action_ :
BALL::VIEW::MolecularControl
- deselect_id_ :
BALL::VIEW::MolecularControl
- deselectCompositeRecursive() :
BALL::VIEW::MainControl
- DeselectControlsMessage() :
BALL::VIEW::DeselectControlsMessage
- DESELECTED_COMPOSITE :
BALL::VIEW::CompositeMessage
- deselectOtherControls_() :
BALL::VIEW::GenericControl
- desolv_ligand_ :
BALL::PolarSolvation
- desolv_protein_ :
BALL::PolarSolvation
- destroy() :
BALL::Composite ,
BALL::PropertyManager ,
BALL::HashGridBox3< Item > ,
BALL::HashGrid3< Item > ,
BALL::HashSet< Key > ,
BALL::List< Value > ,
BALL::RegularExpression ,
BALL::String ,
BALL::Substring ,
BALL::StringHashMap< Value > ,
BALL::ResourceEntry ,
BALL::ResourceFile ,
BALL::Atom ,
BALL::AtomContainer ,
BALL::Bond ,
BALL::NucleicAcid ,
BALL::Nucleotide ,
BALL::PDBAtom ,
BALL::Protein ,
BALL::Residue ,
BALL::SecondaryStructure ,
BALL::ConnectedToPredicate::CTPNode ,
BALL::TFFT1D< ComplexTraits > ,
BALL::TFFT2D< ComplexTraits > ,
BALL::TFFT3D< ComplexTraits > ,
BALL::RuleProcessor ,
BALL::FDPB ,
BALL::FragmentDB ,
BALL::SmartsMatcher::RecStructPool_ ,
BALL::Directory ,
BALL::VIEW::ConnectionObject ,
BALL::VIEW::ModularWidget
- destroy_() :
BALL::GeometricFit
- destroyBond() :
BALL::Atom
- destroyBonds() :
BALL::Atom ,
BALL::AtomContainer
- destroyGrids() :
BALL::FDPB
- desynchronize_() :
BALL::Directory
- details :
BALL::NMRStarFile::Sample ,
BALL::NMRStarFile::MonomericPolymer ,
BALL::NMRStarFile::MolecularSystem::RelatedDB
- determineMethodOfAtomPairGeneration() :
BALL::AmberNonBonded ,
BALL::CharmmNonBonded ,
BALL::MMFF94NonBonded
- determineSelection_() :
BALL::Composite
- deviation_sigma_ :
BALL::CCP4File
- device_ :
BALL::VIEW::DeviceEvent
- DeviceEvent() :
BALL::VIEW::DeviceEvent
- dfs() :
BALL::RingFinder
- DFSBCC_() :
BALL::RingPerceptionProcessor
- dG_free :
BALL::CharmmEEF1::Values
- dG_free_ :
BALL::CharmmEEF1
- dG_ref :
BALL::CharmmEEF1::Values
- dG_ref_ :
BALL::CharmmEEF1
- dH_ref :
BALL::CharmmEEF1::Values
- dH_ref_ :
BALL::CharmmEEF1
- DiagonalIteratorTraits() :
BALL::DiagonalIteratorTraits< valuetype, mtraits
>
- diagram_color_ :
BALL::VIEW::RegularData1DWidget ,
BALL::VIEW::RegularData2DWidget
- dialog_ :
BALL::VIEW::RegularData3DController ,
BALL::VIEW::TrajectoryController ,
BALL::VIEW::VectorGridController ,
BALL::VIEW::CalculateFDPBThread
- dialogButtonClicked_() :
BALL::VIEW::AssignBondOrderConfigurationDialog
- dialogButtonsClicked_() :
BALL::VIEW::Preferences
- dictionary_type :
BALL::MOL2File::SubstructureStruct
- DIELECTRIC_SMOOTHING :
BALL::FDPB::Option ,
BALL::FDPB::Default
- difference() :
BALL::Spectrum< DataT, PeakT, PositionT >
- difference_type :
BALL::ForwardFilterIterator< Predicate, IteratorForward
> ,
BALL::BaseIterator< Container, DataType, Position, Traits
> ,
BALL::HashSet< Key > ,
BALL::TRegularData1D< ValueType > ,
BALL::TRegularData2D< ValueType > ,
BALL::TRegularData3D< ValueType > ,
BALL::PDBRecords ,
BALL::BaseFilterIterator< Predicate, IteratorBase >
,
BALL::ConstBidirectionalFilterIterator< Predicate,
IteratorBidirectional > ,
BALL::BidirectionalFilterIterator< Predicate,
IteratorBidirectional > ,
BALL::ConstForwardFilterIterator< Predicate,
IteratorForward > ,
BALL::ConstRandomAccessFilterIterator< Predicate,
IteratorRandomAccess > ,
BALL::RandomAccessFilterIterator< Predicate,
IteratorRandomAccess > ,
BALL::VIEW::CompositeManager
- differenceSpectrum() :
BALL::Spectrum< DataT, PeakT, PositionT >
- DifferenceType :
BALL::PDBRecords
- diffuse_ :
BALL::VIEW::Stage
- dimension_ :
BALL::TRegularData2D< ValueType > ,
BALL::TRegularData1D< ValueType > ,
BALL::TRegularData3D< ValueType > ,
BALL::ShiftModel1D ,
BALL::ShiftModel2D
- dimension_x_ :
BALL::HashGrid3< Item >
- dimension_y_ :
BALL::HashGrid3< Item >
- dimension_z_ :
BALL::HashGrid3< Item >
- DIPOLE :
BALL::FDPB::Boundary
- dir_ :
BALL::Directory
- DIRECT_RENDERING :
BALL::VIEW::GLRenderer
- DIRECT_TYPE :
BALL::NMRStarFile
- direction_ :
BALL::VIEW::LightSource ,
BALL::EnergyMinimizer
- DIRECTIONAL :
BALL::VIEW::LightSource
- Directory() :
BALL::Directory
- directory_path_ :
BALL::Directory
- directorySelectionChanged() :
BALL::VIEW::PluginDialog
- dirent_ :
BALL::Directory
- disable() :
BALL::PeriodicBoundary ,
BALL::ResidueChecker
- disable_output_ :
BALL::LogStream
- disableAtoms() :
BALL::SDFile
- disableLoggingToFile() :
BALL::VIEW::MainControl
- disableOutput() :
BALL::LogStream
- disableSelection() :
BALL::ForceField ,
BALL::ResidueChecker
- disableTransformation() :
BALL::File
- disableVelocityStorage() :
BALL::DCDFile
- Disc() :
BALL::VIEW::Disc
- DISCRETE__CHI :
BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
- DISCRETE__DISCRETE :
BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
- DISCRETE__REAL :
BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
- discretization_steps_ :
BALL::QSAR::NBModel
- discretizeFeatures :
BALL::QSAR::ClassificationModel
- discretizeTestDataFeatures :
BALL::QSAR::ClassificationModel
- discretizeY() :
BALL::QSAR::QSARData
- DISPLAY :
BALL::VIEW::MainControl
- DISPLAY_ANIMATION :
BALL::VIEW::MainControl
- DISPLAY_CREATE :
BALL::VIEW::MainControl
- display_lists_ :
BALL::VIEW::GLRenderer
- display_lists_index_ :
BALL::VIEW::GLRenderer
- DISPLAY_LISTS_RENDERING :
BALL::VIEW::GLRenderer
- DISPLAY_STEREO :
BALL::VIEW::MainControl
- DISPLAY_VIEWPOINT :
BALL::VIEW::MainControl
- DISPLAYLIST_NOT_DEFINED :
BALL::VIEW::GLDisplayList
- DisplayListHashMap :
BALL::VIEW::GLRenderer
- DisplayListRedeclaration() :
BALL::VIEW::GLDisplayList::DisplayListRedeclaration
- displayMatrix() :
BALL::QSAR::QSARData
- DisplayProperties() :
BALL::VIEW::DisplayProperties
- dist :
BALL::FragmentDB::BuildBondsProcessor::Connection
- Distance :
BALL::DiagonalIteratorTraits< valuetype, mtraits >
,
BALL::VectorIteratorTraits< valuetype > ,
BALL::ColumnIteratorTraits< valuetype, mtraits > ,
BALL::ElementColumnIteratorTraits< valuetype, mtraits
> ,
BALL::ElementRowIteratorTraits< valuetype, mtraits
> ,
BALL::RowIteratorTraits< valuetype, mtraits >
- distance() :
BALL::QSAR::Statistics
- distance_ :
BALL::VIEW::AtomDistanceColorProcessor
- distance_action_ :
BALL::VIEW::MolecularControl
- DISTANCE_DEPENDENT_DIELECTRIC :
BALL::AmberFF::Option ,
BALL::AmberFF::Default ,
BALL::CharmmFF::Option ,
BALL::CharmmFF::Default ,
BALL::MMFF94::Option ,
BALL::MMFF94::Default
- DISTANCE_TOLERANCE :
BALL::CHPI::Option ,
BALL::CHPI::Default
- distance_tolerance_ :
BALL::CHPI
- distributeDatapoints() :
BALL::MPISupport
- Division() :
BALL::Division< First, Second, DataType >
- DivisionByZero() :
BALL::Exception::DivisionByZero
- DLArrayHelper() :
BALL::SimpleDownloaderHelper::DLArrayHelper
- DLHelper() :
BALL::SimpleDownloaderHelper::DLHelper
- DLThread() :
BALL::SimpleDownloaderHelper::DLThread
- DNA_base_radius_ :
BALL::VIEW::AddCartoonModel
- DNA_helix_radius_ :
BALL::VIEW::AddCartoonModel
- DNA_ladder_radius_ :
BALL::VIEW::AddCartoonModel
- DNAMutator() :
BALL::DNAMutator
- do_resize_ :
BALL::VIEW::RenderSetup
- dock_alg_ :
BALL::VIEW::DockingThread ,
BALL::VIEW::DockingController
- dock_dialog_ :
BALL::VIEW::DockingController
- dock_res_ :
BALL::VIEW::DockResultDialog
- dock_result_dialog_ :
BALL::VIEW::DockingController
- DockableRegularData1DWidget() :
BALL::VIEW::DockableRegularData1DWidget
- DockableRegularData2DWidget() :
BALL::VIEW::DockableRegularData2DWidget
- DockDialog() :
BALL::VIEW::DockDialog
- docked_system_ :
BALL::DockResult ,
BALL::VIEW::DockResultDialog
- docking_algorithm_ :
BALL::DockResult
- docking_options_ :
BALL::DockResult
- docking_partner1_ :
BALL::VIEW::DockDialog
- docking_partner2_ :
BALL::VIEW::DockDialog
- DockingController() :
BALL::VIEW::DockingController
- DockingFinishedMessage() :
BALL::VIEW::DockingFinishedMessage
- DockingThread() :
BALL::VIEW::DockingThread
- DockProgressDialog() :
BALL::VIEW::DockProgressDialog
- DockResult() :
BALL::DockResult
- DockResultController() :
BALL::VIEW::DockResultController
- DockResultDialog() :
BALL::VIEW::DockResultDialog
- DockWidget() :
BALL::VIEW::DockWidget
- docu_entries_ :
BALL::VIEW::HelpViewer
- doFFT() :
BALL::TFFT3D< ComplexTraits > ,
BALL::TFFT1D< ComplexTraits > ,
BALL::TFFT2D< ComplexTraits >
- doiFFT() :
BALL::TFFT1D< ComplexTraits > ,
BALL::TFFT2D< ComplexTraits > ,
BALL::TFFT3D< ComplexTraits >
- doMatch_() :
BALL::FragmentDB::NormalizeNamesProcessor
- done :
BALL::QSAR::ValidationConfiguration ,
BALL::QSAR::FeatureSelectionConfiguration ,
BALL::QSAR::PredictionConfiguration ,
BALL::QSAR::InputPartitioningConfiguration ,
BALL::QSAR::InputConfiguration ,
BALL::QSAR::ModelConfiguration
- donor_ :
BALL::HBondProcessor::HBond
- donor_acceptor :
BALL::MMFF94VDWParameters::VDWEntry
- donor_is_hydrogen_ :
BALL::HBondProcessor::HBond
- donor_occupied_ :
BALL::HBondShiftProcessor
- donorIsHydrogen() :
BALL::HBondProcessor::HBond
- donors_ :
BALL::HBondShiftProcessor ,
BALL::HBondProcessor
- doPreTranslation_() :
BALL::GeometricFit
- dot_size_ :
BALL::VIEW::GridVisualisation
- DOTS :
BALL::VIEW::GridVisualisation
- DOUBLE :
BALL::NamedProperty ,
BALL::SmartsParser::SPBond
- double_bond :
BALL::Kekuliser::AtomInfo
- DOUBLE_BOND :
BALL::GAFFCESParser::APSMatcher
- DOUBLE_BOND_TO_PARENT :
BALL::GAFFCESParser::APSMatcher
- download_() :
BALL::SimpleDownloader
- DownloadElectronDensity() :
BALL::VIEW::DownloadElectronDensity
- downloadEnded_() :
BALL::VIEW::DownloadElectronDensity ,
BALL::VIEW::DownloadPDBFile
- downloadFinished() :
BALL::VIEW::DownloadPDBFile ,
BALL::VIEW::DownloadElectronDensity
- DownloadPDBFile() :
BALL::VIEW::DownloadPDBFile
- downloadProgress() :
BALL::VIEW::DownloadElectronDensity ,
BALL::VIEW::DownloadPDBFile
- downloadStarted_() :
BALL::VIEW::DownloadElectronDensity ,
BALL::VIEW::DownloadPDBFile
- downloadToBuffer() :
BALL::SimpleDownloader
- downloadToFile() :
BALL::SimpleDownloader
- downwardClicked() :
BALL::VIEW::DockResultDialog
- drag_ :
BALL::VIEW::SnapshotVisualisationDialog
- dragEnterEvent() :
BALL::VIEW::DockWidget ,
BALL::VIEW::Scene
- DragLogView() :
BALL::VIEW::DragLogView
- draw() :
BALL::VIEW::MeshBuffer ,
BALL::VIEW::GLDisplayList
- draw_box :
BALL::VIEW::GridVisualisation
- draw_DNA_as_ladder_ :
BALL::VIEW::AddCartoonModel
- draw_ribbon_ :
BALL::VIEW::AddCartoonModel
- drawBuffered() :
BALL::VIEW::GLRenderer
- drawDNAAsLadderModel() :
BALL::VIEW::AddCartoonModel
- drawed_mesh_ :
BALL::VIEW::GLRenderer
- drawed_other_object_ :
BALL::VIEW::GLRenderer
- drawFrame_() :
BALL::VIEW::SDWidget
- drawing_mode_ :
BALL::VIEW::GLRenderer ,
BALL::VIEW::Representation
- drawing_precision_ :
BALL::VIEW::Representation ,
BALL::VIEW::GLRenderer ,
BALL::VIEW::ModelProcessor
- drawRiboseAtoms_() :
BALL::VIEW::AddCartoonModel
- drawShape() :
BALL::VIEW::CanvasWidget::PixmapItem
- drawStrand_() :
BALL::VIEW::AddCartoonModel
- dropEvent() :
BALL::VIEW::Scene ,
BALL::VIEW::DockWidget
- DSN6File() :
BALL::DSN6File
- dual_stereo_action_ :
BALL::VIEW::Scene
- dual_stereo_different_display_action_ :
BALL::VIEW::Scene
- DUAL_VIEW_DIFFERENT_DISPLAY_STEREO :
BALL::VIEW::GLRenderer
- DUAL_VIEW_STEREO :
BALL::VIEW::GLRenderer
- DUBNIUM :
BALL::Element
- dummy() :
BALL::Visitor< Host >
- dummy_chain_ :
BALL::VIEW::ChainColorProcessor ,
BALL::VIEW::AddBackboneModel
- dummy_data_item_ :
BALL::CIFFile::Datablock ,
BALL::CIFFile::SaveFrame
- dummy_indices_ :
BALL::CIFFile::Datablock
- dummy_molecule_ :
BALL::SMARTSPredicate ,
BALL::VIEW::MoleculeColorProcessor
- dummy_monomeric_polymer_ :
BALL::NMRStarFile
- dummy_NMR_spectrometer_ :
BALL::NMRStarFile
- dummy_protein_ :
BALL::VIEW::AddBackboneModel
- dummy_residue :
BALL::VIEW::ResidueNameColorProcessor
- dummy_residue_ :
BALL::VIEW::ResidueTypeColorProcessor ,
BALL::VIEW::ResidueNumberColorProcessor
- dummy_sample_ :
BALL::NMRStarFile
- dummy_sample_condition_ :
BALL::NMRStarFile
- dummy_saveframe_ :
BALL::CIFFile::Datablock ,
BALL::NMRStarFile
- dummy_saveframes_ :
BALL::CIFFile::Datablock
- dummy_shift_reference_set_ :
BALL::NMRStarFile
- dummy_ss_ :
BALL::VIEW::AddBackboneModel ,
BALL::VIEW::SecondaryStructureColorProcessor
- dummySlot() :
BALL::VIEW::Scene
- dump() :
BALL::Object ,
BALL::Timer ,
BALL::SmartsMatcher::RecStruct_ ,
BALL::VIEW::Tube ,
BALL::CHPI::AromaticRing ,
BALL::VIEW::LightSource ,
BALL::HashGrid3< Item > ,
BALL::RegularExpression ,
BALL::PropertyManager ,
BALL::VIEW::ModelProcessor ,
BALL::Substring ,
BALL::VIEW::Mesh ,
BALL::Pair6_12RDFIntegrator ,
BALL::VIEW::Point ,
BALL::VIEW::GLDisplayList ,
BALL::RadialDistributionFunction ,
BALL::VIEW::Line ,
BALL::VIEW::Scene ,
BALL::TMatrix4x4< T > ,
BALL::ExpressionParser::SyntaxTree ,
BALL::VIEW::ColorProcessor ,
BALL::VIEW::ConnectionObject ,
BALL::ElementRowIteratorTraits< valuetype, mtraits
> ,
BALL::VIEW::Stage ,
BALL::TVector3< T > ,
BALL::VIEW::SimpleBox ,
BALL::TCircle3< T > ,
BALL::VIEW::Representation ,
BALL::ColumnIteratorTraits< valuetype, mtraits > ,
BALL::VIEW::RepresentationManager ,
BALL::VIEW::PyWidget ,
BALL::Bond ,
BALL::ConnectedToPredicate ,
BALL::VIEW::MultiLine ,
BALL::TAngle< T > ,
BALL::VIEW::ModularWidget ,
BALL::VIEW::GLRenderer ,
BALL::VIEW::ColorUnit ,
BALL::Kekuliser ,
BALL::Protein ,
BALL::Client ,
BALL::HashSet< Key > ,
BALL::PairExpRDFIntegrator ,
BALL::VIEW::ColorUnitHue ,
BALL::VIEW::AddBallAndStickModel ,
BALL::TSimpleBox3< T > ,
BALL::Nucleotide ,
BALL::VIEW::Vertex ,
BALL::ExpressionTree ,
BALL::VIEW::Sphere ,
BALL::SecondaryStructure ,
BALL::Options ,
BALL::PiecewiseFunction ,
BALL::RowIteratorTraits< valuetype, mtraits > ,
BALL::VIEW::PreferencesEntry ,
BALL::VIEW::AddSurfaceModel ,
BALL::Molecule ,
BALL::VIEW::TwoColoredTube ,
BALL::String ,
BALL::VIEW::Disc ,
BALL::Selectable ,
BALL::VIEW::AddLineModel ,
BALL::Composite ,
BALL::Embeddable ,
BALL::TSphere3< T > ,
BALL::VIEW::ColorHSV ,
BALL::HashGridBox3< Item > ,
BALL::VIEW::Label ,
BALL::TVector4< T > ,
BALL::Atom ,
BALL::VIEW::ColorExtension2 ,
BALL::TLine3< T > ,
BALL::TBox3< T > ,
BALL::NucleicAcid ,
BALL::TVector2< T > ,
BALL::DiagonalIteratorTraits< valuetype, mtraits >
,
BALL::VIEW::AddBackboneModel ,
BALL::VIEW::CompositeManager ,
BALL::Residue ,
BALL::VIEW::MainControl ,
BALL::ResourceEntry ,
BALL::Fragment ,
BALL::ConnectedToPredicate ,
BALL::VIEW::Vertex2 ,
BALL::Atom::BondIteratorTraits ,
BALL::ResourceFile ,
BALL::VIEW::GeometricObject ,
BALL::RuleEvaluator ,
BALL::TPlane3< T > ,
BALL::VIEW::MultiColorExtension ,
BALL::PiecewisePolynomial ,
BALL::CHPI::CHGroup ,
BALL::VIEW::Box ,
BALL::LogStreamBuf ,
BALL::RuleProcessor ,
BALL::VIEW::Camera ,
BALL::AtomContainer ,
BALL::TQuaternion< T > ,
BALL::ElementColumnIteratorTraits< valuetype, mtraits
> ,
BALL::PDBAtom ,
BALL::VIEW::ColorRGBA ,
BALL::VIEW::ServerWidget ,
BALL::VIEW::TwoColoredLine ,
BALL::VIEW::Dataset ,
BALL::VIEW::AtomBondModelBaseProcessor ,
BALL::VIEW::ColorMap ,
BALL::Chain ,
BALL::VectorIteratorTraits< valuetype > ,
BALL::VIEW::AddVanDerWaalsModel
- dumpTree() :
BALL::SmartsParser
- dumpTreeRecursive_() :
BALL::SmartsParser
- duplicate() :
BALL::VIEW::GeometricControl
- DUPLICATE_ATOM_NAMES :
BALL::ResidueChecker
- duplicateKeyCheckEnabled() :
BALL::INIFile
- Dy :
BALL::Element
- dynamic_rule :
BALL::MOL2File::SetStruct
- DYSPROSIUM :
BALL::Element