- d -

• dashedBondsEnabled() : BALL::VIEW::AddBallAndStickModel
• data() : BALL::VIEW::PluginModel
• Data() : BALL::ResidueTorsions::Data
• data() : BALL::VIEW::ShortcutTableModel
• Datacontent() : BALL::CIFFile::Datacontent
• DataIteratorTraits() : BALL::HashGridBox3< Item >::DataIteratorTraits
• Dataset() : BALL::VIEW::Dataset
• DatasetControl() : BALL::VIEW::DatasetControl
• DatasetController() : BALL::VIEW::DatasetController
• DatasetMessage() : BALL::VIEW::DatasetMessage
• DCDFile() : BALL::DCDFile
• deactivate() : BALL::BALLPlugin , BALL::TCPServer , BALL::TCPServerThread , BALL::VIEW::ServerWidget
• decodeBase64() : BALL::String
• defaultAssign_() : BALL::Enumerator< Container, SiteIterator, Variant >
• defaultsPressed() : BALL::VIEW::LightSettings
• deleteAtom_() : BALL::VIEW::EditableScene
• deleteBond_() : BALL::VIEW::EditableScene
• deleteBuckets_() : BALL::HashSet< Key >
• deleteChildrenList_() : BALL::Composite
• deleteClicked() : BALL::VIEW::MainControl
• deleteColumn_() : BALL::VIEW::DockResultDialog
• deleteCurrentItems() : BALL::VIEW::DatasetControl , BALL::VIEW::GenericControl , BALL::VIEW::GeometricControl , BALL::VIEW::MolecularControl
• deleteDataset() : BALL::VIEW::DatasetController
• deleteDataset_() : BALL::VIEW::RaytraceableGridController , BALL::VIEW::DatasetController , BALL::VIEW::RegularData3DController , BALL::VIEW::TrajectoryController , BALL::VIEW::DockResultController , BALL::VIEW::VectorGridController
• deleteDatasets() : BALL::VIEW::DatasetController
• deleteDescriptorIDs() : BALL::QSAR::Model
• deleteEdge() : BALL::TMolecularGraph< Node, Edge >
• deleteEdge_() : BALL::NodeItem< Node, Edge >
• deleteEntry() : BALL::ResourceEntry
• deleteEntryArray() : BALL::ResourceEntry
• deleteIsolatedEdges() : BALL::TriangulatedSurface
• deleteIsolatedPoints() : BALL::TriangulatedSurface
• deleteLine() : BALL::INIFile
• deleteNode() : BALL::TMolecularGraph< Node, Edge >
• deleteNode_() : BALL::HashSet< Key >
• deleteOverestimatedBonds_() : BALL::BuildBondsProcessor
• deleteRotamer() : BALL::ResidueRotamerSet
• deleteRotamers() : BALL::ResidueRotamerSet
• deleteScoring() : BALL::DockResult
• deleteSection() : BALL::INIFile
• deleteSimilarFaces() : BALL::ReducedSurface
• deleteSmallSingularToricFace() : BALL::SolventExcludedSurface
• deleteSmallToricFace() : BALL::SolventExcludedSurface
• deleteTexture() : BALL::VIEW::GLRenderWindow
• deleteVariants() : BALL::Enumerator< Container, SiteIterator, Variant >
• DemoTutorialDialog() : BALL::VIEW::DemoTutorialDialog
• Density() : BALL::Density
• depositPFU_() : BALL::SDGenerator
• Descriptor() : BALL::Descriptor
• deselect() : BALL::Composite , BALL::Selectable , BALL::VIEW::MolecularControl
• deselect_() : BALL::Composite , BALL::VIEW::EditableScene
• deselectCompositeRecursive() : BALL::VIEW::MainControl
• DeselectControlsMessage() : BALL::VIEW::DeselectControlsMessage
• deselectOtherControls_() : BALL::VIEW::GenericControl
• destroy() : BALL::ConnectedToPredicate::CTPNode , BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits > , BALL::RuleProcessor , BALL::FDPB , BALL::FragmentDB , BALL::SmartsMatcher::RecStructPool_ , BALL::Directory , BALL::VIEW::ConnectionObject , BALL::VIEW::ModularWidget , BALL::Composite , BALL::PropertyManager , BALL::HashGridBox3< Item > , BALL::HashGrid3< Item > , BALL::HashSet< Key > , BALL::List< Value > , BALL::RegularExpression , BALL::String , BALL::Substring , BALL::StringHashMap< Value > , BALL::ResourceEntry , BALL::ResourceFile , BALL::Atom , BALL::AtomContainer , BALL::Bond , BALL::NucleicAcid , BALL::Nucleotide , BALL::PDBAtom , BALL::Protein , BALL::Residue , BALL::SecondaryStructure
• destroy_() : BALL::GeometricFit
• destroyBond() : BALL::Atom
• destroyBonds() : BALL::Atom , BALL::AtomContainer
• destroyGrids() : BALL::FDPB
• desynchronize_() : BALL::Directory
• determineMethodOfAtomPairGeneration() : BALL::AmberNonBonded , BALL::CharmmNonBonded , BALL::MMFF94NonBonded
• determineSelection_() : BALL::Composite
• DeviceEvent() : BALL::VIEW::DeviceEvent
• dfs() : BALL::RingFinder
• DFSBCC_() : BALL::RingPerceptionProcessor
• DiagonalIteratorTraits() : BALL::DiagonalIteratorTraits< valuetype, mtraits >
• dialogButtonClicked_() : BALL::VIEW::AssignBondOrderConfigurationDialog
• dialogButtonsClicked_() : BALL::VIEW::Preferences
• difference() : BALL::Spectrum< DataT, PeakT, PositionT >
• differenceSpectrum() : BALL::Spectrum< DataT, PeakT, PositionT >
• Directory() : BALL::Directory
• directorySelectionChanged() : BALL::VIEW::PluginDialog
• disable() : BALL::PeriodicBoundary , BALL::ResidueChecker
• disableAtoms() : BALL::SDFile
• disableLoggingToFile() : BALL::VIEW::MainControl
• disableOutput() : BALL::LogStream
• disableSelection() : BALL::ForceField , BALL::ResidueChecker
• disableTransformation() : BALL::File
• disableVelocityStorage() : BALL::DCDFile
• Disc() : BALL::VIEW::Disc
• discretizeY() : BALL::QSAR::QSARData
• DisplayListRedeclaration() : BALL::VIEW::GLDisplayList::DisplayListRedeclaration
• displayMatrix() : BALL::QSAR::QSARData
• DisplayProperties() : BALL::VIEW::DisplayProperties
• distance() : BALL::QSAR::Statistics
• distributeDatapoints() : BALL::MPISupport
• Division() : BALL::Division< First, Second, DataType >
• DivisionByZero() : BALL::Exception::DivisionByZero
• DLArrayHelper() : BALL::SimpleDownloaderHelper::DLArrayHelper
• DLHelper() : BALL::SimpleDownloaderHelper::DLHelper
• DLThread() : BALL::SimpleDownloaderHelper::DLThread
• DNAMutator() : BALL::DNAMutator
• DockableRegularData1DWidget() : BALL::VIEW::DockableRegularData1DWidget
• DockableRegularData2DWidget() : BALL::VIEW::DockableRegularData2DWidget
• DockDialog() : BALL::VIEW::DockDialog
• DockingController() : BALL::VIEW::DockingController
• DockingFinishedMessage() : BALL::VIEW::DockingFinishedMessage
• DockingThread() : BALL::VIEW::DockingThread
• DockProgressDialog() : BALL::VIEW::DockProgressDialog
• DockResult() : BALL::DockResult
• DockResultController() : BALL::VIEW::DockResultController
• DockResultDialog() : BALL::VIEW::DockResultDialog
• DockWidget() : BALL::VIEW::DockWidget
• doFFT() : BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• doiFFT() : BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• doMatch_() : BALL::FragmentDB::NormalizeNamesProcessor
• donorIsHydrogen() : BALL::HBondProcessor::HBond
• doPreTranslation_() : BALL::GeometricFit
• download_() : BALL::SimpleDownloader
• DownloadElectronDensity() : BALL::VIEW::DownloadElectronDensity
• downloadEnded_() : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile
• downloadFinished() : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile
• DownloadPDBFile() : BALL::VIEW::DownloadPDBFile
• downloadProgress() : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile
• downloadStarted_() : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile
• downloadToBuffer() : BALL::SimpleDownloader
• downloadToFile() : BALL::SimpleDownloader
• downwardClicked() : BALL::VIEW::DockResultDialog
• dragEnterEvent() : BALL::VIEW::Scene , BALL::VIEW::DockWidget
• DragLogView() : BALL::VIEW::DragLogView
• draw() : BALL::VIEW::MeshBuffer , BALL::VIEW::GLDisplayList
• drawBuffered() : BALL::VIEW::GLRenderer
• drawDNAAsLadderModel() : BALL::VIEW::AddCartoonModel
• drawFrame_() : BALL::VIEW::SDWidget
• drawRiboseAtoms_() : BALL::VIEW::AddCartoonModel
• drawShape() : BALL::VIEW::CanvasWidget::PixmapItem
• drawStrand_() : BALL::VIEW::AddCartoonModel
• dropEvent() : BALL::VIEW::Scene , BALL::VIEW::DockWidget
• DSN6File() : BALL::DSN6File
• dummy() : BALL::Visitor< Host >
• dummySlot() : BALL::VIEW::Scene
• dump() : BALL::VIEW::ServerWidget , BALL::ElementColumnIteratorTraits< valuetype, mtraits > , BALL::PiecewiseFunction , BALL::Composite , BALL::Selectable , BALL::VIEW::RepresentationManager , BALL::VIEW::ColorExtension2 , BALL::RowIteratorTraits< valuetype, mtraits > , BALL::VIEW::Point , BALL::SecondaryStructure , BALL::VIEW::ColorUnitHue , BALL::VIEW::PyWidget , BALL::Atom::BondIteratorTraits , BALL::HashGridBox3< Item > , BALL::VIEW::ColorRGBA , BALL::ResourceFile , BALL::VIEW::CompositeManager , BALL::ExpressionTree , BALL::RuleProcessor , BALL::Bond , BALL::VIEW::Vertex , BALL::NucleicAcid , BALL::Molecule , BALL::Fragment , BALL::VIEW::ColorMap , BALL::VIEW::SimpleBox , BALL::TVector3< T > , BALL::PDBAtom , BALL::AtomContainer , BALL::VIEW::Mesh , BALL::VIEW::GeometricObject , BALL::ConnectedToPredicate , BALL::Timer , BALL::ColumnIteratorTraits< valuetype, mtraits > , BALL::ExpressionParser::SyntaxTree , BALL::Chain , BALL::CHPI::AromaticRing , BALL::VIEW::Disc , BALL::String , BALL::ElementRowIteratorTraits< valuetype, mtraits > , BALL::PairExpRDFIntegrator , BALL::Kekuliser , BALL::VIEW::ColorProcessor , BALL::VIEW::Scene , BALL::Client , BALL::Embeddable , BALL::PropertyManager , BALL::TQuaternion< T > , BALL::CHPI::CHGroup , BALL::DiagonalIteratorTraits< valuetype, mtraits > , BALL::RegularExpression , BALL::HashGrid3< Item > , BALL::LogStreamBuf , BALL::VIEW::ModularWidget , BALL::RuleEvaluator , BALL::VIEW::ColorUnit , BALL::TVector2< T > , BALL::Atom , BALL::VIEW::PreferencesEntry , BALL::VIEW::AddBallAndStickModel , BALL::VIEW::Representation , BALL::TLine3< T > , BALL::VIEW::ConnectionObject , BALL::VIEW::Label , BALL::ConnectedToPredicate , BALL::TAngle< T > , BALL::VIEW::Dataset , BALL::VIEW::AddBackboneModel , BALL::Nucleotide , BALL::VIEW::Vertex2 , BALL::ResourceEntry , BALL::VIEW::Line , BALL::SmartsMatcher::RecStruct_ , BALL::VIEW::Stage , BALL::VIEW::TwoColoredLine , BALL::TCircle3< T > , BALL::Substring , BALL::VIEW::GLRenderer , BALL::VIEW::AddVanDerWaalsModel , BALL::TMatrix4x4< T > , BALL::HashSet< Key > , BALL::TVector4< T > , BALL::Object , BALL::VIEW::ModelProcessor , BALL::RadialDistributionFunction , BALL::VIEW::GLDisplayList , BALL::TPlane3< T > , BALL::Options , BALL::VIEW::AtomBondModelBaseProcessor , BALL::VIEW::MultiColorExtension , BALL::TBox3< T > , BALL::VIEW::Tube , BALL::VIEW::AddLineModel , BALL::VIEW::Sphere , BALL::Protein , BALL::VIEW::Box , BALL::VIEW::Camera , BALL::VectorIteratorTraits< valuetype > , BALL::VIEW::MultiLine , BALL::VIEW::TwoColoredTube , BALL::Pair6_12RDFIntegrator , BALL::VIEW::LightSource , BALL::PiecewisePolynomial , BALL::VIEW::ColorHSV , BALL::VIEW::MainControl , BALL::Residue , BALL::TSphere3< T > , BALL::TSimpleBox3< T > , BALL::VIEW::AddSurfaceModel
• dumpTree() : BALL::SmartsParser
• dumpTreeRecursive_() : BALL::SmartsParser
• duplicate() : BALL::VIEW::GeometricControl
• duplicateKeyCheckEnabled() : BALL::INIFile