BALL: Class Members

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RadialDistributionFunction() : BALL::RadialDistributionFunction
radius_() : BALL::BindingPocketProcessor
RadiusRuleProcessor() : BALL::RadiusRuleProcessor
RandomAccessFilterIterator() : BALL::RandomAccessFilterIterator< Predicate, IteratorRandomAccess >
RandomAccessIterator() : BALL::RandomAccessIterator< Container, DataType, Position, Traits >
RandomCoilShiftProcessor() : BALL::RandomCoilShiftProcessor
randomDouble() : BALL::RandomNumberGenerator
RandomEvaluation() : BALL::RandomEvaluation
randomGaussian() : BALL::RandomNumberGenerator
randomInteger() : BALL::RandomNumberGenerator
RandomNumberGenerator() : BALL::RandomNumberGenerator
randomUniform() : BALL::RandomNumberGenerator
RaytraceableContourSurfaceDialog() : BALL::VIEW::RaytraceableContourSurfaceDialog
RaytraceableGrid() : BALL::VIEW::RaytraceableGrid
RaytraceableGridController() : BALL::VIEW::RaytraceableGridController
rbegin() : BALL::RandomAccessIterator< Container, DataType, Position, Traits > , BALL::PDBRecords , BALL::ConstBidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::BidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::ConstRandomAccessFilterIterator< Predicate, IteratorRandomAccess > , BALL::RandomAccessFilterIterator< Predicate, IteratorRandomAccess > , BALL::ConstReverseIterator< Container, DataType, Position, Traits > , BALL::ReverseIterator< Container, DataType, Position, Traits > , BALL::Gradient , BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits > , BALL::BidirectionalIterator< Container, DataType, Position, Traits > , BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
rbeginBond() : BALL::Atom
rbeginChildComposite() : BALL::Composite
rbeginComposite() : BALL::Composite
rdbuf() : BALL::LogStream
RDFIntegrator() : BALL::RDFIntegrator
RDFParameter() : BALL::RDFParameter
RDFSection() : BALL::RDFSection
reactTo() : BALL::VIEW::PyWidget
reactToKeyEvent_() : BALL::VIEW::EditableScene
reactToMessages_() : BALL::VIEW::MolecularControl
read() : BALL::BitVector , BALL::Options , BALL::AntechamberFile , BALL::Bruker1DFile , BALL::Bruker2DFile , BALL::CCP4File , BALL::CIFFile , BALL::DCDFile , BALL::DSN6File , BALL::GAMESSDatFile , BALL::GAMESSLogFile , BALL::GenericMolFile , BALL::HINFile , BALL::INIFile , BALL::JCAMPFile , BALL::KCFFile , BALL::MOL2File , BALL::MOLFile , BALL::NMRStarFile , BALL::PDBFile , BALL::SDFile , BALL::TrajectoryFile , BALL::TRRFile , BALL::XYZFile , BALL::TVector3< T > , BALL::GAFFCESParser , BALL::PropertyManager , BALL::Selectable , BALL::PreciseTime , BALL::TimeStamp
readACFile() : BALL::VIEW::MolecularFileDialog
readAndInitBondAnglesFromFile_() : BALL::HybridisationProcessor
readAtomicPolarizabilities_() : BALL::SimpleBase
readAtomLine_() : BALL::MOLFile
readAtomPenalties_() : BALL::AssignBondOrderProcessor
readAtomSection_() : BALL::MOL2File
readAtomTypeSmartsFromFile_() : BALL::HybridisationProcessor
readBinValueasFloat_() : BALL::CCP4File
readBinValueasInt_() : BALL::CCP4File
readBondLengthsFromFile_() : BALL::BuildBondsProcessor
readBondLine_() : BALL::MOLFile
readBondSection_() : BALL::MOL2File
readClassInformationFromFile() : BALL::QSAR::ClassificationModel
readCommentSection_() : BALL::MOL2File
readConversionTable_() : BALL::Peptides::NameConverter
readCountsLine_() : BALL::MOLFile
readCSVFile() : BALL::QSAR::QSARData
readCTAB_() : BALL::MOLFile
readDCDFile() : BALL::ConformationSet
readDELIMITER_() : BALL::KCFFile
readDescriptorInformation() : BALL::QSAR::Model
readDescriptorInformationFromFile() : BALL::QSAR::Model , BALL::QSAR::RegressionModel
readDockResult() : BALL::DockResult
readEDGE_() : BALL::KCFFile
readElectronAffinities_() : BALL::PartialChargeProcessor
readEmpiricalParameters() : BALL::MMFF94StretchParameters , BALL::MMFF94StretchBendParameters , BALL::MMFF94ESParameters
readENTRY_() : BALL::KCFFile
readEntryInformation_() : BALL::NMRStarFile
readFeatureSelectionConfiguration() : BALL::QSAR::ConfigIO
readFiles() : BALL::VIEW::MolecularFileDialog
readFirstRecord() : BALL::PDBFile
readFloat_() : BALL::DCDFile
readFromFile() : BALL::SnapShotManager , BALL::QSAR::ALLModel , BALL::QSAR::ClassificationValidation , BALL::QSAR::KernelModel , BALL::QSAR::LDAModel , BALL::QSAR::LogitModel , BALL::QSAR::Model , BALL::QSAR::NBModel , BALL::QSAR::QSARData , BALL::QSAR::RegressionModel , BALL::QSAR::RegressionValidation , BALL::QSAR::SNBModel , BALL::QSAR::Validation
readFromString() : BALL::VIEW::Camera
readHeader() : BALL::CCP4File , BALL::DCDFile , BALL::DSN6File , BALL::TrajectoryFile
readHeaderValue_() : BALL::DSN6File
readHINFile() : BALL::VIEW::MolecularFileDialog
readInputConfiguration() : BALL::QSAR::ConfigIO
readInputPartitioningConfiguration() : BALL::QSAR::ConfigIO
readInvalidRecord() : BALL::PDBFile
readIonizationEnergies_() : BALL::PartialChargeProcessor
readKernelParametersFromFile() : BALL::QSAR::KernelModel
readLabels() : BALL::QSAR::ClassificationModel
readLights_() : BALL::VIEW::Scene
readLine() : BALL::LineBasedFile , BALL::PDBFile
readMatrix() : BALL::QSAR::Model , BALL::QSAR::QSARData
readModelConfiguration() : BALL::QSAR::ConfigIO
readModelParametersFromFile() : BALL::QSAR::Model
readMOL2File() : BALL::VIEW::MolecularFileDialog
readMoleculeSection_() : BALL::MOL2File
readMOLFile() : BALL::VIEW::MolecularFileDialog
readMolSystem_() : BALL::NMRStarFile
readMonomericPolymers_() : BALL::NMRStarFile
readMSMSFile() : BALL::TSurface< T >
readNextHeader() : BALL::TRRFile
readNextRecord() : BALL::PDBFile
readNMRSpectrometer_() : BALL::NMRStarFile
readNODE_() : BALL::KCFFile
readObject() : BALL::PersistenceManager
readObjectArray() : BALL::PersistenceManager
readObjectPointer() : BALL::PersistenceManager
readObjectPointerArray() : BALL::PersistenceManager
readObjectReference() : BALL::PersistenceManager
readObjectSmartPointer() : BALL::PersistenceManager
readOptionFile() : BALL::Options
readOptions_() : BALL::AssignBondOrderProcessor
readParameters() : BALL::MMFF94ParametersBase
readPDBFile() : BALL::VIEW::MolecularFileDialog
readPredictionConfiguration() : BALL::QSAR::ConfigIO
readPreferenceEntries() : BALL::VIEW::MainControlPreferences , BALL::VIEW::PluginDialog , BALL::VIEW::PythonSettings , BALL::VIEW::PreferencesEntry
readPrimitive() : BALL::PersistenceManager
readPropertyBlock_() : BALL::SDFile
readPropertyNames() : BALL::QSAR::QSARData
readPseudoAtomsConversionTable_() : BALL::Peptides::NameConverter
readRecords() : BALL::PDBFile
readResponseTransformationFromFile() : BALL::QSAR::Model
readSampleConditions_() : BALL::NMRStarFile
readSamples_() : BALL::NMRStarFile
readScalingFactors() : BALL::GeneralizedBornModel
readSCWRLBackboneDependentLibraryFile_() : BALL::SCWRLRotamerFile
readSCWRLBackboneIndependentLibraryFile_() : BALL::SCWRLRotamerFile
readSDFile() : BALL::QSAR::QSARData , BALL::VIEW::MolecularFileDialog
readSetSection_() : BALL::MOL2File
readShiftReferences_() : BALL::NMRStarFile
readShifts_() : BALL::NMRStarFile
readShortcutsFromFile() : BALL::VIEW::ShortcutRegistry
readSize_() : BALL::DCDFile
readStorableObject() : BALL::PersistenceManager
readSubstructureSection_() : BALL::MOL2File
readSymmetryRecords() : BALL::CCP4File
readTrainingData() : BALL::QSAR::Model
readTrainingResult() : BALL::QSAR::KernelModel
readUnknownRecord() : BALL::PDBFile
readValidationConfiguration() : BALL::QSAR::ConfigIO
readVector() : BALL::QSAR::Model
readVector_() : BALL::DCDFile
readXYZFile() : BALL::VIEW::MolecularFileDialog
rebuildAllRepresentations() : BALL::VIEW::RepresentationManager
receivedData() : BALL::SimpleDownloaderHelper::DLHelper
receiveOptions() : BALL::MPISupport
receivePersistenceStream_() : BALL::MPISupport
receivesBufferUpdates() : BALL::VIEW::RenderSetup
receiveSystem() : BALL::MPISupport
recieve() : BALL::RingPerceptionProcessor::TNode_
Reciprocal() : BALL::Reciprocal< Function, DataType >
reconstructFragment() : BALL::ReconstructFragmentProcessor
ReconstructFragmentProcessor() : BALL::ReconstructFragmentProcessor
RecordHELIX() : BALL::PDB::RecordHELIX
RecordMASTER() : BALL::PDB::RecordMASTER
RecordSEQRES() : BALL::PDB::RecordSEQRES
RecordSHEET() : BALL::PDB::RecordSHEET
RecordSSBOND() : BALL::PDB::RecordSSBOND
RecordTURN() : BALL::PDB::RecordTURN
RecStruct_() : BALL::SmartsMatcher::RecStruct_
RecStructCore_() : BALL::SmartsMatcher::RecStructCore_
RecStructPool_() : BALL::SmartsMatcher::RecStructPool_
recurseGeneration_() : BALL::VIEW::MolecularControl
recursion_() : BALL::ConnectivityBase
redock_() : BALL::VIEW::DockResultDialog
redrawAllRepresentations() : BALL::VIEW::MainControl
ReducedSurface() : BALL::ReducedSurface
reduceSelection_() : BALL::VIEW::MainControl
reestimateBondOrdersRings_() : BALL::BuildBondsProcessor
refine() : BALL::TriangulatedSphere
refineGuidePoints_() : BALL::VIEW::AddBackboneModel , BALL::VIEW::AddCartoonModel
refineModelParts_() : BALL::VIEW::AddBackboneModel
reflectivenessFactorChanged() : BALL::VIEW::MaterialSettings
refresh() : BALL::VIEW::GLOffscreenTarget , BALL::VIEW::GLRenderWindow , BALL::VIEW::RenderTarget , BALL::VIEW::RenderWindow< taPixelDatatype >
registerAt() : BALL::LogStreamNotifier
registerChildEntry() : BALL::VIEW::PluginDialog
registerClass() : BALL::PersistenceManager
registerComponents_() : BALL::SLICKEnergy , BALL::SLICKScore
registerConnectionObject() : BALL::VIEW::ConnectionObject
registerController() : BALL::VIEW::DatasetControl
registerForHelpSystem() : BALL::VIEW::ModularWidget , BALL::VIEW::DockWidget , BALL::VIEW::HelpViewer
registerHandler() : BALL::PluginManager
RegisterHelpSystemMessage() : BALL::VIEW::RegisterHelpSystemMessage
registerInstance_() : BALL::Embeddable
registerKernelClasses_() : BALL::PersistenceManager
registerModule() : BALL::ShiftModel
registerObject_() : BALL::VIEW::PreferencesEntry
registerObjectCreator() : BALL::VIEW::ServerWidget
registerPredicate() : BALL::Expression
registerShortcut() : BALL::VIEW::ShortcutRegistry
registerStandardModules_() : BALL::ShiftModel
registerStandardPredicates_() : BALL::Expression
registerThis() : BALL::Embeddable
registerTransformation() : BALL::TransformationManager , BALL::File
registerTypes_() : BALL::MPISupport
registerWidget() : BALL::VIEW::ModularWidget
registerWidgetForHelpSystem_() : BALL::VIEW::PreferencesEntry
registerWidgets_() : BALL::VIEW::PreferencesEntry
Registry() : BALL::QSAR::Registry
RegistryEntry() : BALL::QSAR::RegistryEntry
RegressionModel() : BALL::QSAR::RegressionModel
RegressionValidation() : BALL::QSAR::RegressionValidation
RegularData1DWidget() : BALL::VIEW::RegularData1DWidget
RegularData2DWidget() : BALL::VIEW::RegularData2DWidget
RegularData3DController() : BALL::VIEW::RegularData3DController
RegularExpression() : BALL::RegularExpression
rehash() : BALL::HashSet< Key >
rehash_() : BALL::HashSet< Key >
ReissCavFreeEnergyProcessor() : BALL::ReissCavFreeEnergyProcessor
reject() : BALL::VIEW::AmberConfigurationDialog , BALL::VIEW::AssignBondOrderConfigurationDialog , BALL::VIEW::CharmmConfigurationDialog , BALL::VIEW::EditSingleShortcut , BALL::VIEW::GeometricFitDialog , BALL::VIEW::MMFF94ConfigurationDialog , BALL::VIEW::Preferences , BALL::VIEW::RaytraceableContourSurfaceDialog
RelatedDB() : BALL::NMRStarFile::MolecularSystem::RelatedDB
releaseBuffer() : BALL::VIEW::RenderTarget , BALL::VIEW::RenderWindow< taPixelDatatype >
RelHydrophobicVdWSurface() : BALL::RelHydrophobicVdWSurface
RelNegativePartialCharge() : BALL::RelNegativePartialCharge
RelNegativePolarVdWSurface() : BALL::RelNegativePolarVdWSurface
RelNegativeVdWSurface() : BALL::RelNegativeVdWSurface
RelNumberOfRotatableBonds() : BALL::RelNumberOfRotatableBonds
RelNumberOfRotatableSingleBonds() : BALL::RelNumberOfRotatableSingleBonds
RelPolarVdWSurface() : BALL::RelPolarVdWSurface
RelPositivePartialCharge() : BALL::RelPositivePartialCharge
RelPositivePolarVdWSurface() : BALL::RelPositivePolarVdWSurface
RelPositiveVdWSurface() : BALL::RelPositiveVdWSurface
remove() : BALL::LogStream , BALL::VIEW::CompositeManager , BALL::HashGridBox3< Item > , BALL::HashGrid3< Item > , BALL::Directory , BALL::List< Value > , BALL::StringHashMap< Value > , BALL::AtomContainer , BALL::TriangulatedSurface , BALL::AtomContainer , BALL::Chain , BALL::Molecule , BALL::GraphFace< Vertex, Edge, Face > , BALL::Molecule , BALL::Nucleotide , BALL::Residue , BALL::SecondaryStructure , BALL::System , BALL::GraphEdge< Vertex, Edge, Face > , BALL::GraphFace< Vertex, Edge, Face > , BALL::GraphVertex< Vertex, Edge, Face > , BALL::RSFace , BALL::Triangle , BALL::TriangulatedSurface , BALL::Directory , BALL::File , BALL::VIEW::MainControl , BALL::VIEW::RepresentationManager
remove_() : BALL::VIEW::MainControl
removeAll() : BALL::HashGridBox3< Item >
removeChild() : BALL::ConnectedToPredicate::CTPNode , BALL::Composite , BALL::ResourceEntry
removeClippingPlane() : BALL::VIEW::RepresentationManager
removeComponent() : BALL::ForceField , BALL::ComposedEnergyProcessor , BALL::ForceField , BALL::ScoringFunction
removeComposite() : BALL::VIEW::MolecularControl
removedComposite() : BALL::VIEW::RepresentationManager
removeEmptyDescriptors() : BALL::QSAR::FeatureSelection
removeEntry() : BALL::VIEW::Preferences
removeFile_() : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile
removeGrid_() : BALL::VIEW::ModifyRepresentationDialog
removeGridTextures() : BALL::VIEW::RenderSetup
removeHavingProperty() : BALL::AtomContainer
removeHighlyCorrelatedCompounds() : BALL::QSAR::QSARData
removeHighlyCorrelatedFeatures() : BALL::QSAR::FeatureSelection
removeHotkey() : BALL::VIEW::PyWidget
removeInsideTriangles() : BALL::SASTriangulator
removeInvalidDescriptors() : BALL::QSAR::QSARData
removeInvalidSubstances() : BALL::QSAR::QSARData
removeItem_() : BALL::VIEW::GenericControl , BALL::VIEW::Preferences
removeKey() : BALL::ResourceEntry , BALL::ResourceFile
removeLightPressed() : BALL::VIEW::LightSettings
removeLightSource() : BALL::VIEW::Stage
removeLowResponseCorrelation() : BALL::QSAR::FeatureSelection
removeMenuEntry() : BALL::VIEW::MainControl
removeModularWidget() : BALL::VIEW::MainControl
removeNotHavingProperty() : BALL::AtomContainer
removePluginDirectory() : BALL::PluginManager , BALL::VIEW::PluginDialog
removeRecursive_() : BALL::VIEW::MolecularControl
removeRepresentation() : BALL::VIEW::TilingRenderer , BALL::VIEW::GLRenderer , BALL::VIEW::Renderer , BALL::VIEW::RenderSetup , BALL::VIEW::GeometricControl
removeSelected() : BALL::Composite
removeSelection() : BALL::VIEW::HotkeyTable
removeSolvent() : BALL::PeriodicBoundary
removeTextureFor_() : BALL::VIEW::GLRenderer
removeUnselected() : BALL::Composite
rename() : BALL::File , BALL::Directory , BALL::VIEW::SnapshotManagerInterface
renameRepresentation() : BALL::VIEW::GeometricControl
renameTo() : BALL::File , BALL::Directory
rend() : BALL::ReverseIterator< Container, DataType, Position, Traits > , BALL::RandomAccessIterator< Container, DataType, Position, Traits > , BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits > , BALL::BidirectionalIterator< Container, DataType, Position, Traits > , BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits > , BALL::PDBRecords , BALL::ConstBidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::BidirectionalFilterIterator< Predicate, IteratorBidirectional > , BALL::ConstRandomAccessFilterIterator< Predicate, IteratorRandomAccess > , BALL::RandomAccessFilterIterator< Predicate, IteratorRandomAccess > , BALL::ConstReverseIterator< Container, DataType, Position, Traits > , BALL::Gradient
rendBond() : BALL::Atom
rendChildComposite() : BALL::Composite
rendComposite() : BALL::Composite
render() : BALL::VIEW::GLRenderer
render_() : BALL::VIEW::Renderer , BALL::VIEW::TilingRenderer
renderBox_() : BALL::VIEW::GLRenderer , BALL::VIEW::Renderer
renderClippingPlane_() : BALL::VIEW::GLRenderer , BALL::VIEW::Renderer
renderDashedBond_() : BALL::VIEW::AddBallAndStickModel
renderDisc_() : BALL::VIEW::GLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer
Renderer() : BALL::VIEW::Renderer
rendererChanged() : BALL::VIEW::MaterialSettings
renderGrid_() : BALL::VIEW::EditableScene
renderGridVisualisation_() : BALL::VIEW::Renderer , BALL::VIEW::GLRenderer
renderLabel_() : BALL::VIEW::GLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer
renderLine_() : BALL::VIEW::GLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer , BALL::VIEW::VRMLRenderer , BALL::VIEW::STLRenderer
renderMesh_() : BALL::VIEW::Renderer , BALL::VIEW::GLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::STLRenderer , BALL::VIEW::VRMLRenderer
renderMultiLine_() : BALL::VIEW::GLRenderer , BALL::VIEW::Renderer , BALL::VIEW::POVRenderer
renderMultipleBond_() : BALL::VIEW::AddBallAndStickModel
renderNucleotideOutline_() : BALL::VIEW::AddCartoonModel
renderOneRepresentation() : BALL::VIEW::TilingRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer
renderPoint_() : BALL::VIEW::POVRenderer , BALL::VIEW::Renderer , BALL::VIEW::GLRenderer
renderQuadMesh_() : BALL::VIEW::Renderer , BALL::VIEW::GLRenderer
renderRepresentation_() : BALL::VIEW::GLRenderer
renderRepresentations_() : BALL::VIEW::GLRenderer
renderRuler() : BALL::VIEW::GLRenderer , BALL::VIEW::Renderer , BALL::VIEW::TilingRenderer
renderSD_() : BALL::VIEW::SDWidget
RenderSetup() : BALL::VIEW::RenderSetup
renderSimpleBox_() : BALL::VIEW::Renderer , BALL::VIEW::GLRenderer
renderSphere_() : BALL::VIEW::POVRenderer , BALL::VIEW::STLRenderer , BALL::VIEW::GLRenderer , BALL::VIEW::VRMLRenderer , BALL::VIEW::Renderer
renderStandardBond_() : BALL::VIEW::AddBallAndStickModel
renderText() : BALL::VIEW::GLRenderWindow
renderToBuffer() : BALL::VIEW::TilingRenderer , BALL::VIEW::BufferedRenderer , BALL::VIEW::GLRenderer , BALL::VIEW::RenderSetup
renderToBuffer_() : BALL::VIEW::RenderSetup
renderToBufferImpl() : BALL::VIEW::BufferedRenderer
renderTube_() : BALL::VIEW::POVRenderer , BALL::VIEW::Renderer , BALL::VIEW::STLRenderer , BALL::VIEW::GLRenderer , BALL::VIEW::VRMLRenderer
renderTwoColoredLine_() : BALL::VIEW::GLRenderer , BALL::VIEW::VRMLRenderer , BALL::VIEW::STLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer
renderTwoColoredTube_() : BALL::VIEW::STLRenderer , BALL::VIEW::VRMLRenderer , BALL::VIEW::GLRenderer , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer
RenderWindow() : BALL::VIEW::RenderWindow< taPixelDatatype >
reopen() : BALL::File
replace() : BALL::Composite
Representation() : BALL::VIEW::Representation
RepresentationManager() : BALL::VIEW::RepresentationManager
RepresentationMessage() : BALL::VIEW::RepresentationMessage
rescale() : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
reset() : BALL::Path , BALL::Timer , BALL::VIEW::DockDialog , BALL::VIEW::GeometricFitDialog , BALL::VIEW::EditSingleShortcut , BALL::Mainframe
resetBondOrders() : BALL::AssignBondOrderProcessor
resetCamera_() : BALL::VIEW::Scene
resetCounter() : BALL::TContour< T > , BALL::TContourLine< T >
resetLanguageChanged() : BALL::VIEW::MainControlPreferences
resetOptions() : BALL::VIEW::AssignBondOrderConfigurationDialog , BALL::VIEW::AmberConfigurationDialog , BALL::VIEW::CharmmConfigurationDialog , BALL::VIEW::MMFF94ConfigurationDialog
resetPositions() : BALL::AtomVector
resetPredicate() : BALL::AtomContainerIteratorTraits , BALL::AtomIteratorTraits , BALL::ChainIteratorTraits , BALL::MoleculeIteratorTraits , BALL::ProteinIteratorTraits , BALL::SecondaryStructureIteratorTraits , BALL::FragmentIteratorTraits , BALL::ResidueIteratorTraits , BALL::PDBAtomIteratorTraits , BALL::NucleicAcidIteratorTraits , BALL::NucleotideIteratorTraits
resetPressed() : BALL::VIEW::FDPBDialog , BALL::VIEW::DockDialog
resetRepresentationsForRenderer_() : BALL::VIEW::Scene
resetScoring() : BALL::ConformationSet
resetTo_pressed() : BALL::VIEW::UndoManagerDialog
resetTracking() : BALL::VIEW::Scene
Residue() : BALL::PDB::Residue , BALL::Residue
ResidueChecker() : BALL::ResidueChecker
ResidueIteratorTraits() : BALL::ResidueIteratorTraits
ResidueNameColorProcessor() : BALL::VIEW::ResidueNameColorProcessor
ResidueNumberColorProcessor() : BALL::VIEW::ResidueNumberColorProcessor
ResidueRotamerSet() : BALL::ResidueRotamerSet
residuesAreConnected_() : BALL::VIEW::AddBackboneModel
ResidueTorsions() : BALL::ResidueTorsions
ResidueTypeColorProcessor() : BALL::VIEW::ResidueTypeColorProcessor
resize() : BALL::VIEW::RenderTarget , BALL::VIEW::MainControl , BALL::VIEW::GLRenderWindow , BALL::VIEW::RenderWindow< taPixelDatatype > , BALL::TRegularData3D< ValueType > , BALL::AtomVector , BALL::PDBRecords , BALL::VIEW::GLOffscreenTarget , BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::VIEW::FrameBufferFormat , BALL::VIEW::RenderSetup
resize_() : BALL::SmartsMatcher::RecStructPool_
resized() : BALL::VIEW::FrameBufferFormat
resizeEvent() : BALL::VIEW::Scene , BALL::VIEW::DockableRegularData1DWidget , BALL::VIEW::DockableRegularData2DWidget
resizeGrid() : BALL::VIEW::RegularData3DController
resizeNormals() : BALL::TSurface< T >
resizeTriangles() : BALL::TSurface< T >
resizeVertices() : BALL::TSurface< T >
Resolution() : BALL::VIEW::Resolution
resolvePseudoAtoms() : BALL::Peptides::NameConverter
ResourceEntry() : BALL::ResourceEntry
ResourceFile() : BALL::ResourceFile
restoreDefaultValues() : BALL::VIEW::PreferencesEntry , BALL::VIEW::LightSettings
restoreItem_() : BALL::VIEW::AtomOverview
restoreRepresentations() : BALL::VIEW::RepresentationManager
restoreTrainingResults() : BALL::QSAR::RegressionValidation
restoreValues() : BALL::VIEW::LightSettings , BALL::VIEW::PreferencesEntry
restoreValues_() : BALL::VIEW::PreferencesEntry
restoreViewPoint() : BALL::VIEW::Scene
restoreWindows() : BALL::VIEW::MainControl
retrieveHistoryLine_() : BALL::VIEW::PyWidget
retrieveSymOps_() : BALL::CrystalInfo
returnPressed() : BALL::VIEW::PyWidget
reverse() : BALL::String
ReverseIterator() : BALL::ReverseIterator< Container, DataType, Position, Traits >
revert() : BALL::GraphEdge< Vertex, Edge, Face >
rewind() : BALL::LineBasedFile
ribbonModeEnabled() : BALL::VIEW::AddBackboneModel
ribbonsEnabled() : BALL::VIEW::AddCartoonModel
right() : BALL::String
Ring() : BALL::RingAnalyser::Ring
RingAnalyser() : BALL::RingAnalyser
RingFinder() : BALL::RingFinder
ringIsClockwise_() : BALL::SDGenerator
RingPerceptionProcessor() : BALL::RingPerceptionProcessor
RombergIntegrator() : BALL::RombergIntegrator< Function, DataType >
Rotamer() : BALL::Rotamer
RotamerLibrary() : BALL::RotamerLibrary
rotate() : BALL::VIEW::Camera , BALL::TMatrix4x4< T > , BALL::VIEW::Scene , BALL::TMatrix4x4< T >
rotateBases() : BALL::DNAMutator
rotateClockwise() : BALL::VIEW::Scene
rotateComposites() : BALL::VIEW::Scene
rotateMode_() : BALL::VIEW::Scene
rotateSameBases() : BALL::DNAMutator
rotateSystem_() : BALL::VIEW::Scene
rotateSystemClockwise_() : BALL::VIEW::Scene
rotateVector3Angle_() : BALL::VIEW::GLRenderer
rotateX() : BALL::TMatrix4x4< T >
rotateY() : BALL::TMatrix4x4< T >
rotateZ() : BALL::TMatrix4x4< T >
RotationalEntropyLoss() : BALL::RotationalEntropyLoss
RotationAngles_() : BALL::GeometricFit::RotationAngles_
rowCount() : BALL::VIEW::PluginModel , BALL::VIEW::ShortcutTableModel
RowIteratorTraits() : BALL::RowIteratorTraits< valuetype, mtraits >
rowSelected() : BALL::VIEW::PythonSettings
RRModel() : BALL::QSAR::RRModel
RSComputer() : BALL::RSComputer
RSEdge() : BALL::RSEdge
RSFace() : BALL::RSFace
RSVertex() : BALL::RSVertex
RuleEvaluator() : BALL::RuleEvaluator
RuleProcessor() : BALL::RuleProcessor
run() : BALL::VIEW::MDSimulationThread , BALL::RSComputer , BALL::SESTriangulator , BALL::TCPServerThread , BALL::VIEW::BALLThread , BALL::SESComputer , BALL::VIEW::DockingThread , BALL::VIEW::UpdateRepresentationThread , BALL::VIEW::RunPythonThread , BALL::VIEW::EnergyMinimizerThread , BALL::VIEW::AnimationThread , BALL::VIEW::FakeDriver , BALL::PyInterpreter , BALL::SASTriangulator , BALL::VIEW::RenderSetup , BALL::VIEW::ServerWidget::BALLViewServer , BALL::SESSingularityCleaner , BALL::SimpleDownloaderHelper::DLThread , BALL::VIEW::TestFramework::MyEventThread , BALL::VIEW::CalculateFDPBThread
runBondOrderAssignment() : BALL::VIEW::MolecularStructure
runCommand_() : BALL::VIEW::PyWidget
runCurrentScript() : BALL::VIEW::PyWidget
runDocking() : BALL::VIEW::DockingController
runFile() : BALL::PyInterpreter
RunGAMESSDialog() : BALL::VIEW::RunGAMESSDialog
runMinimization() : BALL::VIEW::MolecularStructure
RunPythonThread() : BALL::VIEW::RunPythonThread
runScoring_() : BALL::VIEW::DockingController
runString() : BALL::VIEW::PyWidget
runTest() : BALL::VIEW::TestFramework