- s -

• same_energy_counter_ : BALL::EnergyMinimizer
• SAMPLES : BALL::Pair6_12RDFIntegrator::Pair6_12RDFIntegrator::Option , BALL::PairExpRDFIntegrator::PairExpRDFIntegrator::Option
• sampling_rate_ : BALL::DSN6File
• SAS_grid : BALL::FDPB
• sbmb : BALL::MMFF94AtomType
• SCALING_ELECTROSTATIC_1_4 : BALL::AmberFF::AmberFF::Default , BALL::CharmmFF::CharmmFF::Option , BALL::CharmmFF::CharmmFF::Default , BALL::AmberFF::AmberFF::Option
• SCALING_VDW_1_4 : BALL::AmberFF::AmberFF::Option , BALL::AmberFF::AmberFF::Default , BALL::CharmmFF::CharmmFF::Option , BALL::CharmmFF::CharmmFF::Default
• scores_ : BALL::DockResult::DockResult::Scoring_
• scorings_ : BALL::DockResult
• second : BALL::Quadruple< T1, T2, T3, T4 > , BALL::Triple< T1, T2, T3 >
• second_ : BALL::SmartsParser::SmartsParser::SPEdge
• second_edge_ : BALL::SmartsParser::SmartsParser::SPEdge , BALL::SmartsParser::SmartsParser::SPNode
• selected_model_ : BALL::PDBFile
• shift_s_ : BALL::ShiftedLVMMMinimizer
• shifted_direction_ : BALL::ShiftedLVMMMinimizer
• SHOW_HYDROGENS : BALL::SDGenerator::SDGenerator::Option , BALL::VIEW::SDWidget::SDWidget::Option
• sig_w : BALL::CharmmEEF1::CharmmEEF1::Values
• size_ : BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
• skipped_records_ : BALL::PDBInfo
• snapshot_ : BALL::EnergyMinimizer
• SNAPSHOT_FREQUENCY : BALL::MolecularDynamics::MolecularDynamics::Option , BALL::EnergyMinimizer::EnergyMinimizer::Option
• snapshot_frequency_ : BALL::EnergyMinimizer
• snapshot_order_ : BALL::ConformationSet , BALL::DockResult::DockResult::Scoring_
• SOLUTE_DC : BALL::FDPB::FDPB::Option , BALL::FDPB::FDPB::Default
• SOLVATION_CUTOFF : BALL::CharmmFF::CharmmFF::Option , BALL::CharmmFF::CharmmFF::Default
• SOLVATION_CUTON : BALL::CharmmFF::CharmmFF::Option , BALL::CharmmFF::CharmmFF::Default
• SOLVENT_DC : BALL::FDPB::FDPB::Option , BALL::FDPB::FDPB::Default
• SOLVENT_FILENAME : BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Option , BALL::PairExpInteractionEnergyProcessor::PairExpInteractionEnergyProcessor::Option
• SOLVENT_NUMBER_DENSITY : BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Option , BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Default , BALL::PCMCavFreeEnergyProcessor::PCMCavFreeEnergyProcessor::Option , BALL::PCMCavFreeEnergyProcessor::PCMCavFreeEnergyProcessor::Default , BALL::PierottiCavFreeEnergyProcessor::PierottiCavFreeEnergyProcessor::Option , BALL::PierottiCavFreeEnergyProcessor::PierottiCavFreeEnergyProcessor::Default , BALL::ReissCavFreeEnergyProcessor::ReissCavFreeEnergyProcessor::Option , BALL::ReissCavFreeEnergyProcessor::ReissCavFreeEnergyProcessor::Default
• sorted_by_ : BALL::DockResult
• sp_atom_ : BALL::SmartsParser::SmartsParser::SPNode
• SPACING : BALL::FDPB::FDPB::Option , BALL::FDPB::FDPB::Default
• spacing_ : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
• SPEED_OF_LIGHT : BALL::Constant
• sssr_ : BALL::SmartsParser
• start_ : BALL::DSN6File
• state : BALL::SmartsParser
• step_ : BALL::EnergyMinimizer
• step_width_ : BALL::RotamerLibrary
• STORE_SKIPPED_RECORDS : BALL::PDBFile::PDBFile::Option , BALL::PDBFile::PDBFile::Default
• store_skipped_records_ : BALL::PDBFile
• stored_s_ : BALL::StrangLBFGSMinimizer
• stored_y_ : BALL::StrangLBFGSMinimizer
• STREAM_HEADER : BALL::XDRPersistenceManager
• STREAM_TRAILER : BALL::XDRPersistenceManager
• STRICT_LINE_CHECKING : BALL::PDBFile::PDBFile::Default , BALL::PDBFile::PDBFile::Option
• structures_ : BALL::ConformationSet
• SURFACE_FILENAME : BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Default , BALL::PairExpInteractionEnergyProcessor::PairExpInteractionEnergyProcessor::Default , BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Option , BALL::PairExpInteractionEnergyProcessor::PairExpInteractionEnergyProcessor::Option
• SURFACE_TENSION : BALL::UhligCavFreeEnergyProcessor::UhligCavFreeEnergyProcessor::Default , BALL::UhligCavFreeEnergyProcessor::UhligCavFreeEnergyProcessor::Option
• SURFACE_TYPE : BALL::GeometricFit::GeometricFit::Option , BALL::PairExpInteractionEnergyProcessor::PairExpInteractionEnergyProcessor::Option , BALL::PairExpInteractionEnergyProcessor::PairExpInteractionEnergyProcessor::Default , BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Default , BALL::Pair6_12InteractionEnergyProcessor::Pair6_12InteractionEnergyProcessor::Option
• swap_bytes_ : BALL::DSN6File
• sym_size : BALL::TRRFile::TRRFile::TRRHeader
• system : BALL::GAMESSLogFile
• system_ : BALL::ConformationSet