BALL: Class Members

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abort() : BALL::TCPTransfer
abortClicked() : BALL::VIEW::DockProgressDialog
aboutToExit() : BALL::VIEW::MainControl
accept() : BALL::VIEW::AtomOverview , BALL::VIEW::LabelDialog
activate() : BALL::VIEW::ServerWidget
add() : BALL::SmartsMatcher::SmartsMatcher::RecStruct_
addAlgorithm() : BALL::VIEW::DockDialog
addAllRecords_() : BALL::PDBFile
addAminoAcid() : BALL::Peptides::PeptideBuilder
addAtom() : BALL::VIEW::AtomDistanceColorProcessor
AddBackboneModel() : BALL::VIEW::AddBackboneModel
AddBallAndStickModel() : BALL::VIEW::AddBallAndStickModel
AddCartoonModel() : BALL::VIEW::AddCartoonModel
addComponent() : BALL::ComposedEnergyProcessor
addComposite() : BALL::VIEW::MolecularControl
addDataPath() : BALL::Path
addEdge() : BALL::SmartsParser
addHydrogens() : BALL::VIEW::MolecularStructure
Addition() : BALL::Addition< First, Second, DataType >
addLightPressed() : BALL::VIEW::LightSettings
addLightSource() : BALL::VIEW::Stage
AddLineModel() : BALL::VIEW::AddLineModel
addModularWidget() : BALL::VIEW::MainControl
addMovable_() : BALL::ResidueRotamerSet
addNode() : BALL::SmartsParser
addPluginDirectory() : BALL::PluginManager
addPropertiesFromSPAtom() : BALL::SmartsParser::SmartsParser::SPAtom
addRecursiveEdge() : BALL::SmartsParser
addRepresentation() : BALL::VIEW::GeometricControl
addRingConnection() : BALL::SmartsParser
addRotamer() : BALL::ResidueRotamerSet , BALL::RotamerLibrary
addScoring() : BALL::DockResult
addScoringFunction() : BALL::VIEW::DockDialog , BALL::VIEW::DockResultDialog
addSolvent() : BALL::PeriodicBoundary
addSPEdge() : BALL::SmartsParser::SmartsParser::SPNode
AddSurfaceModel() : BALL::VIEW::AddSurfaceModel
addToolBarEntries() : BALL::VIEW::ModularWidget , BALL::VIEW::EditableScene , BALL::VIEW::Scene
AddVanDerWaalsModel() : BALL::VIEW::AddVanDerWaalsModel
addVariants() : BALL::Enumerator< Container, SiteIterator, Variant >
advancedClicked() : BALL::VIEW::DockResultDialog
advancedOptions() : BALL::VIEW::MinimizationDialog
after() : BALL::String
algAdvancedPressed() : BALL::VIEW::DockDialog
algorithmChosen() : BALL::VIEW::DockDialog
AmberBend() : BALL::AmberBend
AmberConfigurationDialog() : BALL::VIEW::AmberConfigurationDialog
AmberFF() : BALL::AmberFF
AmberNonBonded() : BALL::AmberNonBonded
AmberStretch() : BALL::AmberStretch
AmberTorsion() : BALL::AmberTorsion
AminoAcidDescriptor() : BALL::Peptides::AminoAcidDescriptor
analyseRings() : BALL::RingAnalyser
animateClicked() : BALL::VIEW::SnapshotVisualisationDialog
AnisotropyShiftProcessor() : BALL::AnisotropyShiftProcessor
append() : BALL::DCDFile , BALL::TrajectoryFile , BALL::TRRFile , BALL::AtomContainer , BALL::Chain , BALL::Molecule , BALL::Nucleotide , BALL::Residue , BALL::SecondaryStructure , BALL::System
appendChild() : BALL::Composite , BALL::ExpressionTree
appendHotkey() : BALL::VIEW::HotkeyTable
appendLine() : BALL::INIFile
appendSection() : BALL::INIFile
apply() : BALL::VIEW::LightSettings , BALL::PTE_ , BALL::Composite , BALL::HashSet< Key > , BALL::List< Value > , BALL::INIFile , BALL::ElectrostaticPotentialCalculator , BALL::AssignBondOrderProcessor , BALL::VIEW::DisplayProperties , BALL::VIEW::MaterialSettings , BALL::VIEW::StageSettings
apply_() : BALL::AssignBondOrderProcessor
applyAncestor() : BALL::Composite
applyBonds() : BALL::Atom
applyChild() : BALL::Composite
applyDescendant() : BALL::Composite
applyDescendantPostorder() : BALL::Composite
applyDescendantPreorder() : BALL::Composite
applyFirstSnapShot() : BALL::SnapShotManager
applyInterBond() : BALL::AtomContainer
applyIntraBond() : BALL::AtomContainer
applyLastSnapShot() : BALL::SnapShotManager
applyLevel() : BALL::Composite
applyNextSnapShot() : BALL::SnapShotManager
applyPostorder() : BALL::Composite
applyPreferences() : BALL::VIEW::Scene , BALL::VIEW::DisplayProperties , BALL::VIEW::Preferences , BALL::VIEW::MainControl , BALL::VIEW::ServerWidget , BALL::VIEW::EditableScene , BALL::VIEW::PyWidget , BALL::VIEW::ModularWidget
applyPreorder() : BALL::Composite
applyProcessors_() : BALL::VIEW::DockDialog
applySelector() : BALL::VIEW::MolecularControl
applySnapShot() : BALL::SnapShot , BALL::SnapShotManager
applyTo() : BALL::VIEW::MMFF94ConfigurationDialog , BALL::VIEW::AmberConfigurationDialog , BALL::VIEW::CharmmConfigurationDialog
applyValues_() : BALL::VIEW::DockDialog
AromaticityProcessor() : BALL::AromaticityProcessor
aromatize() : BALL::AromaticityProcessor
aromatizeSimple() : BALL::AromaticityProcessor
assembleMolecule() : BALL::MoleculeAssembler
assign() : BALL::Templates
assignBackboneAtoms() : BALL::AtomBijection
AssignBondOrderConfigurationDialog() : BALL::VIEW::AssignBondOrderConfigurationDialog
AssignBondOrderProcessor() : BALL::AssignBondOrderProcessor
AssignBondOrderResultsDialog() : BALL::VIEW::AssignBondOrderResultsDialog
assignByName() : BALL::AtomBijection
assignCAlphaAtoms() : BALL::AtomBijection
AssignChargeProcessor() : BALL::AssignChargeProcessor
assignCharges() : BALL::Templates
assignParameters() : BALL::QuadraticBondStretch , BALL::QuadraticAngleBend , BALL::CharmmEEF1 , BALL::LennardJones , BALL::QuadraticImproperTorsion , BALL::Potential1210 , BALL::CosineTorsion
AssignRadiusProcessor() : BALL::AssignRadiusProcessor
AssignShiftProcessor() : BALL::AssignShiftProcessor
assignSpecificValues_() : BALL::AtomTyper
assignTorsion() : BALL::ResidueTorsions
assignTrivial() : BALL::AtomBijection
assignTypeNames() : BALL::Templates
Atom() : BALL::Atom
AtomBijection() : BALL::AtomBijection
AtomBondModelBaseProcessor() : BALL::VIEW::AtomBondModelBaseProcessor
AtomChargeColorProcessor() : BALL::VIEW::AtomChargeColorProcessor
AtomContainer() : BALL::AtomContainer
AtomDistanceColorProcessor() : BALL::VIEW::AtomDistanceColorProcessor
AtomicPolarizabilities() : BALL::AtomicPolarizabilities
AtomInformationContent() : BALL::AtomInformationContent
AtomOverview() : BALL::VIEW::AtomOverview
AtomTypes() : BALL::AtomTypes
AtomVector() : BALL::AtomVector
AverageBondAngle_() : BALL::HybridisationProcessor