- s -
- s
: boost::hash< RTpieCpp::InstanceHandle >::conv
, boost::hash< RTpieCpp::MeshHandle >::conv
- salt_bridge_atom
: BALL::PDB::RecordCONECT
- saltbridges
: BALL::PDB::Structure::ConectAtomList
, BALL::PDB::Structure
- same_energy_counter_
: BALL::EnergyMinimizer
- samples
: BALL::NMRStarFile::NMRAtomDataSet
- SAMPLES
: BALL::Pair6_12RDFIntegrator::Default
, BALL::Pair6_12RDFIntegrator::Option
, BALL::PairExpRDFIntegrator::Default
, BALL::PairExpRDFIntegrator::Option
- sampling_rate_
: BALL::CCP4File
, BALL::DSN6File
- sas_
: BALL::TriangulatedSAS
- SAS_grid
: BALL::FDPB
- save_file
: BALL::VIEW::TestFramework
- save_id_
: BALL::VIEW::MolecularFileDialog
- save_images_
: BALL::VIEW::MDSimulationThread
- SAVE_ONLY_SUMS
: BALL::MolecularInteractions
- save_project_action_
: BALL::VIEW::MainControl
- saved_position_
: BALL::AtomVector
- saveframe
: BALL::CIFFile::Datacontent
- saveframe_categories
: BALL::CIFFile::Datablock
- saveframe_names
: BALL::CIFFile::Datablock
- sbmb
: BALL::MMFF94AtomType
, BALL::MMFF94StretchBend::Stretch
- sbmb_exists
: BALL::MMFF94StretchParameters::BondData
- sbtijk
: BALL::MMFF94StretchBend::StretchBend
- scaling_
: BALL::VIEW::ForceModel
- SCALING_ELECTROSTATIC_1_4
: BALL::AmberFF::Default
, BALL::AmberFF::Option
, BALL::CharmmFF::Default
, BALL::CharmmFF::Option
- SCALING_VDW_1_4
: BALL::AmberFF::Default
, BALL::AmberFF::Option
, BALL::CharmmFF::Default
, BALL::CharmmFF::Option
- scalingUsed
: BALL::VIEW::VRMLRenderer
- scene_
: BALL::Mainframe
, BALL::VIEW::AnimationThread
, BALL::VIEW::InteractionMode
, BALL::VIEW::InteractionModeManager
, BALL::VIEW::LightSettings
, BALL::VIEW::Renderer
, BALL::VIEW::RenderSetup
- score_
: BALL::ScoringComponent
, BALL::ScoringFunction
- score_contribution_names
: BALL::ScoringOptimizer::Result
- score_contributions
: BALL::ScoringOptimizer::Result
- SCOREGRID_INTERPOLATION
: BALL::GridBasedScoring::Default
, BALL::GridBasedScoring::Option
- scoregrid_interpolation_
: BALL::GridBasedScoring
- SCOREGRID_RESOLUTION
: BALL::GridBasedScoring::Default
, BALL::GridBasedScoring::Option
- scoregrid_resolution_
: BALL::GridBasedScoring
- scores_
: BALL::DockResult::Scoring_
- scoring_components_
: BALL::ScoringFunction
- scoring_function_
: BALL::Constraint
, BALL::DockingAlgorithm
, BALL::DockProblem
, BALL::GridAnalysis
, BALL::Rescoring
, BALL::ScoringComponent
- SCORING_TOLERANCE
: BALL::AromaticRingStacking::Default
, BALL::AromaticRingStacking::Option
- SCORING_TYPE
: BALL::EvolutionaryDocking::Default
, BALL::EvolutionaryDocking::Option
, BALL::IMGDock::Default
, BALL::IMGDock::Option
- scoring_type_
: BALL::DockingAlgorithm
- scorings_
: BALL::DockResult
- screenshot_nr_
: BALL::VIEW::Scene
- script_edit_
: BALL::VIEW::PyWidget
- script_mode_
: BALL::VIEW::PyWidget
- script_output_
: BALL::VIEW::PyWidget
- SCWRL_4_0
: BALL::SideChainPlacementProcessor::Method
- SCWRL_BINARY_PATH
: BALL::SideChainPlacementProcessor::Default
, BALL::SideChainPlacementProcessor::Option
- SCWRL_INPUT_FILE
: BALL::SideChainPlacementProcessor::Default
, BALL::SideChainPlacementProcessor::Option
- SCWRL_OUTPUT_FILE
: BALL::SideChainPlacementProcessor::Default
, BALL::SideChainPlacementProcessor::Option
- SCWRL_SEQUENCE_FILE
: BALL::SideChainPlacementProcessor::Default
, BALL::SideChainPlacementProcessor::Option
- sd_file
: BALL::QSAR::InputConfiguration
- sd_systems_
: BALL::VIEW::AssignBondOrderResultsDialog
, BALL::VIEW::PubChemDialog
- sdwidget_
: BALL::VIEW::AssignBondOrderResultsDialog
- sec_axis_
: BALL::CCP4File
- sec_struct
: BALL::PDB::Structure::AtomEntry
- sec_structs
: BALL::PDB::Structure
- second
: BALL::Quadruple< T1, T2, T3, T4 >
, BALL::Triple< T1, T2, T3 >
- second_
: BALL::Addition< First, Second, DataType >
, BALL::Bond
, BALL::Division< First, Second, DataType >
, BALL::Product< First, Second, DataType >
, BALL::SmartsParser::SPEdge
, BALL::Subtraction< First, Second, DataType >
- second_atom
: BALL::MOLFile::BondStruct
, BALL::PDB::RecordLINK
, BALL::PDB::RecordSLTBRG
- second_atom_expressions_
: BALL::EFShiftProcessor
- second_edge_
: BALL::SmartsParser::SPEdge
, BALL::SmartsParser::SPNode
- second_non_hydrogen_atom
: BALL::PDB::RecordHYDBND
- secs_
: BALL::PreciseTime
- section_entries_
: BALL::ParameterSection
- section_index_
: BALL::INIFile
- section_name_
: BALL::ParameterSection
- sections_
: BALL::INIFile
- segment_ID
: BALL::PDB::RecordANISOU
, BALL::PDB::RecordATOM
, BALL::PDB::RecordHETATM
, BALL::PDB::RecordSIGATM
, BALL::PDB::RecordSIGUIJ
- select_action_
: BALL::VIEW::MolecularControl
- select_id_
: BALL::VIEW::MolecularControl
- selected_
: BALL::GeneticAlgorithm
, BALL::Selectable
, BALL::VIEW::MolecularControl
- selected_atoms_
: BALL::Selector
- selected_color
: BALL::VIEW::ModifyRepresentationDialog
- selected_coloring_method_
: BALL::VIEW::MolecularControl
- selected_model_
: BALL::PDBFile
, BALL::VIEW::MolecularControl
- selection_
: BALL::ResidueChecker
, BALL::VIEW::MainControl
- selection_color_
: BALL::VIEW::ColorProcessor
- selection_enabled_
: BALL::ForceField
- selection_name
: BALL::QSAR::FeatureSelectionConfiguration
- selector_edit_
: BALL::VIEW::MolecularControl
- send_buffer
: BALL::RingPerceptionProcessor::TNode_
- sense_of_strand
: BALL::PDB::RecordSHEET
- separate_activity_file
: BALL::QSAR::InputConfiguration
- SEPARATOR
: BALL::ResourceFile
- seq_identity
: BALL::NMRStarFile::MonomericPolymer::HomologDB
- seq_positive
: BALL::NMRStarFile::MonomericPolymer::HomologDB
- seq_to_submitted_percentage
: BALL::NMRStarFile::MonomericPolymer::HomologDB
- seqres_records
: BALL::PDB::BookKeeping
- sequence_
: BALL::Peptides::PeptideBuilder
- sequence_database_accession_code
: BALL::PDB::RecordDBREF
- sequence_database_ID_code
: BALL::PDB::RecordDBREF
- sequence_database_name
: BALL::PDB::RecordDBREF
- sequence_number
: BALL::PDB::RecordSITE
, BALL::PDB::RecordTURN
, BALL::PDB::Residue
- sequence_number_
: BALL::PDBFile
- serial_number
: BALL::PDB::RecordANISOU
, BALL::PDB::RecordATOM
, BALL::PDB::RecordHELIX
, BALL::PDB::RecordHETATM
, BALL::PDB::RecordMTRIX1
, BALL::PDB::RecordMTRIX2
, BALL::PDB::RecordMTRIX3
, BALL::PDB::RecordSEQRES
, BALL::PDB::RecordSIGATM
, BALL::PDB::RecordSIGUIJ
, BALL::PDB::RecordSSBOND
, BALL::PDB::RecordTER
, BALL::PDB::RecordTVECT
, BALL::PDB::Structure::ConectAtomList
- ses_
: BALL::SESComputer
, BALL::SESSingularityCleaner
, BALL::TriangulatedSES
- sets_
: BALL::MOL2File
- setup_time_stamp_
: BALL::ForceField
- sg_entry_
: BALL::VIEW::GenerateCrystalDialog
- sg_list_
: BALL::VIEW::GenerateCrystalDialog
- sg_symops_
: BALL::CrystalInfo
- share_from_
: BALL::VIEW::GLOffscreenTarget
- shared_bonds
: BALL::RingAnalyser::Ring
- shared_handlers_
: BALL::PluginManager
- sheet_
: BALL::SecondaryStructureProcessor
- sheet_ID
: BALL::PDB::RecordSHEET
- sheet_list_
: BALL::PDBFile
- sheet_records
: BALL::PDB::BookKeeping
- shift_map_
: BALL::RandomCoilShiftProcessor
- shift_s_
: BALL::ShiftedLVMMMinimizer
- shift_units
: BALL::NMRStarFile::ShiftReferenceElement
- shift_value
: BALL::NMRStarFile::NMRAtomData
, BALL::NMRStarFile::ShiftReferenceElement
- shifted_direction_
: BALL::ShiftedLVMMMinimizer
- shifts
: BALL::NMRStarFile::MolecularSystem::ChemicalUnit
- ShiftXwise_hydrogen_bonds_computation_
: BALL::HBondShiftProcessor
- shininess
: BALL::VIEW::Stage::Material
- shininess_
: BALL::VIEW::Stage
- shortcut_
: BALL::VIEW::TestFramework
- shortcut_keys_
: BALL::VIEW::ShortcutRegistry
- shortcut_registry_
: BALL::VIEW::MainControl
- shortcuts_
: BALL::VIEW::ShortcutRegistry
- show_coordinate_system_
: BALL::VIEW::Stage
- show_fps_
: BALL::VIEW::Scene
- SHOW_HYDROGENS
: BALL::SDGenerator::Default
, BALL::SDGenerator::Option
, BALL::VIEW::SDWidget::Default
, BALL::VIEW::SDWidget::Option
- SHOW_IDENTICAL_LIGANDS_WARNING
: BALL::DockResultFile
- show_light_sources_
: BALL::VIEW::Renderer
, BALL::VIEW::Scene
- show_preview_
: BALL::VIEW::Renderer
- show_ruler_
: BALL::VIEW::RenderSetup
- show_selection_infos_
: BALL::VIEW::CompositeMessage
- show_ss_
: BALL::VIEW::MolecularControl
- show_ss_id_
: BALL::VIEW::MolecularControl
- show_window_enty_
: BALL::VIEW::ModularWidget
- sig11
: BALL::PDB::RecordSIGUIJ
- sig12
: BALL::PDB::RecordSIGUIJ
- sig13
: BALL::PDB::RecordSIGUIJ
- sig22
: BALL::PDB::RecordSIGUIJ
- sig23
: BALL::PDB::RecordSIGUIJ
- sig33
: BALL::PDB::RecordSIGUIJ
- sig_w
: BALL::CharmmEEF1::Values
- sig_w_
: BALL::CharmmEEF1
- silent_
: BALL::VIEW::PyWidget
- SIM_CUTOFF
: BALL::BinaryFingerprintMethods::Default
, BALL::BinaryFingerprintMethods::Option
- SIMPLE
: BALL::AStarBondOrderStrategy::Heuristic
- simulation_icon_
: BALL::VIEW::MainControl
- simulation_running_xpm_
: BALL::VIEW::MainControl
- simulation_stoped_xpm_
: BALL::VIEW::MainControl
- simulation_thread_
: BALL::VIEW::MainControl
- single_pick_
: BALL::VIEW::GLRenderer
- singular_
: BALL::RSEdge
, BALL::RSFace
- singular_edges_
: BALL::SolventExcludedSurface
- site_records
: BALL::PDB::BookKeeping
- size
: BALL::PoseClustering::ClusterProperties
- size_
: BALL::Exception::IndexOverflow
, BALL::Exception::IndexUnderflow
, BALL::Exception::InvalidSize
, BALL::Exception::OutOfMemory
, BALL::Exception::SizeUnderflow
, BALL::TRegularData2D< ValueType >
, BALL::TRegularData3D< ValueType >
- sizeX_
: BALL::Rescoring3D
- sizeY_
: BALL::Rescoring3D
- sizeZ_
: BALL::Rescoring3D
- skipped_records_
: BALL::PDBInfo
- SLAVE_PATH
: BALL::GeometricFit::Default
, BALL::GeometricFit::Option
- slices
: BALL::VIEW::GridVisualisation
- slides_
: BALL::VIEW::AddBackboneModel
- slides_angle_
: BALL::VIEW::AddBackboneModel
- smallX
: BALL::VIEW::VRMLRenderer
- smallY
: BALL::VIEW::VRMLRenderer
- smallZ
: BALL::VIEW::VRMLRenderer
- SMART_MATCHING
: BALL::HybridisationProcessor::Method
- smart_names_
: BALL::MolecularSimilarity
- smart_pointer_list_
: BALL::PersistenceManager
- smarts_
: BALL::MolecularSimilarity
- smarts_edit_
: BALL::VIEW::MolecularControl
- smiles
: BALL::VIEW::PubChemDialog::ParsedResult_
- smiles_parser_
: BALL::VIEW::PubChemDialog
- smooth_lines_
: BALL::VIEW::GLRenderer
- snap
: BALL::PoseClustering::PosePointer
- snap_shot_manager_
: BALL::VIEW::SnapshotVisualisationDialog
- snapshot_
: BALL::EnergyMinimizer
- snapshot_buffer_
: BALL::SnapShotManager
- SNAPSHOT_FREQUENCY
: BALL::EnergyMinimizer::Default
, BALL::EnergyMinimizer::Option
, BALL::MolecularDynamics::Default
, BALL::MolecularDynamics::Option
- snapshot_frequency_
: BALL::EnergyMinimizer
, BALL::MolecularDynamics
- snapshot_interface_
: BALL::VIEW::UndoManagerDialog
- snapshot_manager_ptr_
: BALL::MolecularDynamics
- snapshot_order_
: BALL::ConformationSet
, BALL::DockResult::Scoring_
- soffsetf1_
: BALL::Bruker2DFile
- soffsetf2_
: BALL::Bruker2DFile
- SOLUTE_DC
: BALL::FDPB::Default
, BALL::FDPB::Option
- solution_number_
: BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
, BALL::VIEW::AssignBondOrderResultsDialog
- solution_systems_
: BALL::VIEW::AssignBondOrderResultsDialog
- solutions_
: BALL::AssignBondOrderProcessor
, BALL::Kekuliser
- SOLVATION_CUTOFF
: BALL::CharmmFF::Default
, BALL::CharmmFF::Option
- SOLVATION_CUTON
: BALL::CharmmFF::Default
, BALL::CharmmFF::Option
- solvation_energy_
: BALL::CharmmNonBonded
- solvation_parameters
: BALL::Solvation
- solvation_volumes
: BALL::Solvation
- solvent_
: BALL::Pair6_12InteractionEnergyProcessor
, BALL::PairExpInteractionEnergyProcessor
- solvent_atoms_
: BALL::SolventDescriptor
, BALL::SolventParameter
- SOLVENT_DC
: BALL::FDPB::Default
, BALL::FDPB::Option
- solvent_descriptor_
: BALL::SolventParameter
- SOLVENT_DESCRIPTOR_FILE
: BALL::NonpolarSolvation::Default
, BALL::NonpolarSolvation::Option
- SOLVENT_FILENAME
: BALL::Pair6_12InteractionEnergyProcessor::Default
, BALL::Pair6_12InteractionEnergyProcessor::Option
, BALL::PairExpInteractionEnergyProcessor::Default
, BALL::PairExpInteractionEnergyProcessor::Option
- SOLVENT_NUMBER_DENSITY
: BALL::NonpolarSolvation::Default
, BALL::NonpolarSolvation::Option
, BALL::Pair6_12InteractionEnergyProcessor::Default
, BALL::Pair6_12InteractionEnergyProcessor::Option
, BALL::PCMCavFreeEnergyProcessor::Default
, BALL::PCMCavFreeEnergyProcessor::Option
, BALL::PierottiCavFreeEnergyProcessor::Default
, BALL::PierottiCavFreeEnergyProcessor::Option
, BALL::ReissCavFreeEnergyProcessor::Default
, BALL::ReissCavFreeEnergyProcessor::Option
- sorted_by_
: BALL::DockResult
- sorted_edges
: BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
- source_
: BALL::EdgeItem< Node, Edge >
- sources
: BALL::PDB::RecordSOURCE
- sp_atom_
: BALL::SmartsParser::SPNode
- space_group
: BALL::PDB::RecordCRYST1::UnitCell
, BALL::PDB::Structure::UnitCellInfo
- space_group_
: BALL::CCP4File
, BALL::CrystalInfo
- SPACE_GROUP_FILE
: BALL::CrystalGenerator::Default
, BALL::CrystalGenerator::Option
, BALL::CrystalInfo::Default
, BALL::CrystalInfo::Option
- SPACING
: BALL::FDPB::Default
, BALL::FDPB::Option
- spacing_
: BALL::FDPB
, BALL::ShiftModel1D
, BALL::ShiftModel2D
, BALL::Spectrum< DataT, PeakT, PositionT >
, BALL::TContourSurface< T >::Cube
, BALL::TRegularData1D< ValueType >
, BALL::TRegularData2D< ValueType >
, BALL::TRegularData3D< ValueType >
- specific_model_ID
: BALL::PDB::RecordCISPEP
- spectrum_
: BALL::Bruker1DFile
, BALL::Bruker2DFile
- specular_
: BALL::VIEW::Stage
- specular_color
: BALL::VIEW::Stage::Material
- specular_intensity
: BALL::VIEW::Stage::Material
- SPEED_OF_LIGHT
: BALL::Constant
- sphere_
: BALL::SASFace
- sphere_list_
: BALL::VIEW::GLRenderer
- sphere_template_
: BALL::VIEW::XML3DRenderer
- spheres_
: BALL::SurfaceProcessor
- spheric_faces_
: BALL::SolventExcludedSurface
- spointnumf1_
: BALL::Bruker2DFile
- spointnumf2_
: BALL::Bruker2DFile
- sqrt_density_
: BALL::SASTriangulator
, BALL::SESTriangulator
- square_distance_
: BALL::VIEW::ModifyRepresentationDialog
- squared_distance_
: BALL::FragmentDistanceCollector
- ss_
: BALL::VIEW::AddBackboneModel
- ssbond_correction_
: BALL::EmpiricalHSShiftProcessor
- ssbond_list_
: BALL::PDBFile
- ssbonds
: BALL::PDB::Structure
- sssr_
: BALL::GAFFTypeProcessor
, BALL::SmartsMatcher
, BALL::SmartsParser
- stack_pages_
: BALL::VIEW::PreferencesEntry
- stage_
: BALL::VIEW::LightSettings
, BALL::VIEW::Renderer
, BALL::VIEW::RenderSetup
, BALL::VIEW::Scene
- stage_settings_
: BALL::VIEW::Scene
- standard_bond_exists
: BALL::MMFF94StretchParameters::BondData
- STANDARD_BOND_LENGTH
: BALL::SDGenerator::Default
, BALL::SDGenerator::Option
- standard_occupancy_deviation
: BALL::PDB::RecordSIGATM
- standard_residue_name
: BALL::PDB::RecordMODRES
- standard_temperature_deviation
: BALL::PDB::RecordSIGATM
- standard_vector_deviation
: BALL::PDB::RecordSIGATM
- standardized_moments
: BALL::Spectrum< DataT, PeakT, PositionT >
- start_
: BALL::CCP4File
, BALL::DSN6File
, BALL::TContour< T >
- start_action_
: BALL::VIEW::FileObserver
- start_animation_action_
: BALL::VIEW::Scene
- start_log_
: BALL::PyInterpreter
- start_recording
: BALL::VIEW::TestFramework
- started_startup_script_
: BALL::VIEW::PyWidget
- starting_configuration_
: BALL::AssignBondOrderProcessor
- startup_script_
: BALL::VIEW::PyWidget
- state
: BALL::CIFFile
, BALL::ExpressionParser
, BALL::GAFFCESParser
, BALL::GAMESSDatFile
, BALL::GAMESSLogFile
, BALL::SmartsParser
, BALL::SmilesParser
, BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >
, BALL::VIEW::RunPythonThread
- static_ligand_energy_
: BALL::ScoringFunction
- static_ligand_fragments_
: BALL::ScoringFunction
- static_members
: BALL::MOL2File::SetStruct
- static_residues_hashgrid_
: BALL::ScoringFunction
- statistic
: BALL::QSAR::FeatureSelectionConfiguration
, BALL::QSAR::PredictionConfiguration
, BALL::QSAR::ValidationConfiguration
- statistic_name
: BALL::QSAR::FeatureSelectionConfiguration
, BALL::QSAR::PredictionConfiguration
, BALL::QSAR::ValidationConfiguration
- status
: BALL::MOL2File::SetStruct
, BALL::RSComputer::ProbePosition
- status_
: BALL::ResidueChecker
- stddev_
: BALL::ScoringComponent
- stddev_out_
: BALL::Rescoring
- step_
: BALL::AStarBondOrderStrategy
, BALL::EnergyMinimizer
- step_number_of_starting_time_
: BALL::DCDFile
- STEP_WIDTH
: BALL::IMGDock::Default
, BALL::IMGDock::Option
- step_width_
: BALL::RotamerLibrary
- stepFourier_
: BALL::TFFT1D< ComplexTraits >
- stepFourierX_
: BALL::TFFT2D< ComplexTraits >
, BALL::TFFT3D< ComplexTraits >
- stepFourierY_
: BALL::TFFT2D< ComplexTraits >
, BALL::TFFT3D< ComplexTraits >
- stepFourierZ_
: BALL::TFFT3D< ComplexTraits >
- stepPhys_
: BALL::TFFT1D< ComplexTraits >
- stepPhysX_
: BALL::TFFT2D< ComplexTraits >
, BALL::TFFT3D< ComplexTraits >
- stepPhysY_
: BALL::TFFT2D< ComplexTraits >
, BALL::TFFT3D< ComplexTraits >
- stepPhysZ_
: BALL::TFFT3D< ComplexTraits >
- steps_
: BALL::VIEW::MDSimulationThread
- steps_between_saves_
: BALL::DCDFile
- steps_between_updates_
: BALL::VIEW::SimulationThread
- stereo
: BALL::MOLFile::BondStruct
- stereo_
: BALL::VIEW::Renderer
- stereo_camera_
: BALL::VIEW::Scene
- stereo_care_box
: BALL::MOLFile::AtomStruct
- stereo_delta_
: BALL::VIEW::GLRenderWindow
- stereo_frustum_conversion_height_
: BALL::VIEW::Renderer
- stereo_frustum_conversion_width_
: BALL::VIEW::Renderer
- stereo_left_eye_
: BALL::VIEW::Scene
- stereo_mode_
: BALL::VIEW::InteractionModeManager
- stereo_right_eye_
: BALL::VIEW::Scene
- stereo_setup_
: BALL::VIEW::RenderSetup
- sticks_
: BALL::Spectrum< DataT, PeakT, PositionT >
- still_to_notify_
: BALL::VIEW::RepresentationManager
- stop_action_
: BALL::VIEW::FileObserver
- stop_animation_
: BALL::VIEW::Scene
- stop_recording
: BALL::VIEW::TestFramework
- stop_script_
: BALL::VIEW::PyWidget
- stop_simulation_
: BALL::VIEW::MainControl
- stop_simulation_action_
: BALL::VIEW::MainControl
- store_interactions_
: BALL::ScoringFunction
- store_interactions_disabled_
: BALL::Atom
- store_interactions_phC_only_
: BALL::ScoringFunction
- STORE_NN
: BALL::BinaryFingerprintMethods::Default
, BALL::BinaryFingerprintMethods::Option
- STORE_SKIPPED_RECORDS
: BALL::PDBFile::Default
, BALL::PDBFile::Option
- store_skipped_records_
: BALL::PDBFile
- stored_camera_
: BALL::VIEW::Scene
- stored_s_
: BALL::StrangLBFGSMinimizer
- stored_y_
: BALL::StrangLBFGSMinimizer
- stptol_
: BALL::LineSearch
- strand_height_
: BALL::VIEW::AddCartoonModel
- strand_number
: BALL::PDB::RecordSHEET
- strand_width_
: BALL::VIEW::AddCartoonModel
- strategies_
: BALL::AssignBondOrderProcessor
- stream
: BALL::LogStreamBuf::StreamStruct
- stream_
: BALL::LogStreamNotifier
- STREAM_HEADER
: BALL::XDRPersistenceManager
- stream_list_
: BALL::LogStreamBuf
- STREAM_TRAILER
: BALL::XDRPersistenceManager
- stretch_
: BALL::StretchComponent
- stretch_i_j
: BALL::MMFF94StretchBend::StretchBend
- stretch_j_k
: BALL::MMFF94StretchBend::StretchBend
- stretch_parameters_
: BALL::StretchComponent
- STRICT_LINE_CHECKING
: BALL::PDBFile::Default
, BALL::PDBFile::Option
- strict_line_checking_
: BALL::PDBFile
- stride_
: BALL::VIEW::BufferedRenderer
- string
: BALL::PDB::RecordTypeFormat
- string_format
: BALL::VIEW::PythonHighlighter
- string_pattern
: BALL::VIEW::PythonHighlighter
- string_value
: BALL::JCAMPFile::JCAMPValue
- stringToWildcard_
: BALL::GAFFCESParser::CESPredicate
- STRUCTURE_BASED
: BALL::HybridisationProcessor::Method
- structures_
: BALL::ConformationSet
- sub_type
: BALL::MOL2File::SetStruct
, BALL::MOL2File::SubstructureStruct
- subcategories_
: BALL::Options
- subject_length
: BALL::NMRStarFile::MonomericPolymer::HomologDB
- submission_date
: BALL::NMRStarFile::EntryInformation
- substance_names_
: BALL::QSAR::Model
, BALL::QSAR::QSARData
- substances_names_
: BALL::QSAR::Validation
- substructure
: BALL::MOL2File::AtomStruct
- substructure_name
: BALL::MOL2File::AtomStruct
- substructure_type
: BALL::MOL2File::SubstructureStruct
- substructures_
: BALL::MOL2File
- suffix_
: BALL::VIEW::DownloadPDBFile
- sulfur_bridges_
: BALL::DisulfidBondProcessor
- summary_
: BALL::SecondaryStructureProcessor
- SUPERPOSE_LIGAND
: BALL::IMGDock::Default
, BALL::IMGDock::Option
- supported_formats
: BALL::ParameterDescription
- surface_
: BALL::NumericalSAS
, BALL::SurfaceProcessor
- surface_drawing_precision_
: BALL::VIEW::ModelProcessor
, BALL::VIEW::Representation
- SURFACE_FILENAME
: BALL::Pair6_12InteractionEnergyProcessor::Default
, BALL::Pair6_12InteractionEnergyProcessor::Option
, BALL::PairExpInteractionEnergyProcessor::Default
, BALL::PairExpInteractionEnergyProcessor::Option
- SURFACE_TENSION
: BALL::NonpolarSolvation::Default
, BALL::NonpolarSolvation::Option
, BALL::UhligCavFreeEnergyProcessor::Default
, BALL::UhligCavFreeEnergyProcessor::Option
- SURFACE_THICKNESS
: BALL::GeometricFit::Default
, BALL::GeometricFit::Option
- SURFACE_TYPE
: BALL::GeometricFit::Default
, BALL::GeometricFit::Option
, BALL::Pair6_12InteractionEnergyProcessor::Default
, BALL::Pair6_12InteractionEnergyProcessor::Option
, BALL::PairExpInteractionEnergyProcessor::Default
, BALL::PairExpInteractionEnergyProcessor::Option
- surface_type_
: BALL::SurfaceProcessor
- SURVIVORS
: BALL::EvolutionaryDocking::Default
, BALL::EvolutionaryDocking::Option
- survivors_
: BALL::GeneticAlgorithm
- swap_bytes_
: BALL::CCP4File
, BALL::DCDFile
, BALL::DSN6File
- swap_endian_
: BALL::BinaryFileAdaptor< T >
- swap_side_by_side_stereo_
: BALL::VIEW::Stage
- swidthf1_
: BALL::Bruker2DFile
- swidthf2_
: BALL::Bruker2DFile
- switch_grid_
: BALL::VIEW::Scene
- switch_move
: BALL::VIEW::TestFramework
- sym_size
: BALL::TRRFile::TRRHeader
- symbol
: BALL::MOLFile::AtomStruct
, BALL::PTE_::SymbolToElement
- symmetry_group_
: BALL::GAMESSDatFile
- symmetry_operator
: BALL::PDB::RecordSSBOND
- symops_
: BALL::SpaceGroupParameters
- syntax_tree_
: BALL::ExpressionParser
- sys_path_
: BALL::PyInterpreter
- system
: BALL::GAMESSLogFile
- system1_
: BALL::DockingAlgorithm
- system2_
: BALL::DockingAlgorithm
- system_
: BALL::ConformationSet
, BALL::CrystalGenerator
, BALL::ForceField
, BALL::SDGenerator
, BALL::ShiftModel1D
, BALL::ShiftModel2D
, BALL::SmilesParser
, BALL::VIEW::FDPBDialog
, BALL::VIEW::GenerateCrystalDialog
, BALL::VIEW::SDWidget
- system_backup_a_
: BALL::GeometricFit
- system_backup_b_
: BALL::GeometricFit
- system_i_
: BALL::PoseClustering
- system_j_
: BALL::PoseClustering
- system_molecular_weight
: BALL::NMRStarFile::MolecularSystem
- system_name
: BALL::NMRStarFile::MolecularSystem
- system_oligomer_state
: BALL::NMRStarFile::MolecularSystem
- system_origin_
: BALL::VIEW::Scene
- system_paramagnetic
: BALL::NMRStarFile::MolecularSystem
- system_physical_state
: BALL::NMRStarFile::MolecularSystem
- system_ptr_
: BALL::MolecularDynamics
, BALL::SnapShotManager
- system_thiol_state
: BALL::NMRStarFile::MolecularSystem