Here is a list of all documented class members with links to
the class documentation for each member:
- b :
BALL::TSimpleBox3< T >
- b_ :
BALL::HBondShiftProcessor
- b_i_ :
BALL::ConjugateGradientMinimizer
- backbone_dependent_ :
BALL::RotamerLibrary
- backward() :
BALL::CompositeIteratorTraits
- BalabanIndexJ() :
BALL::BalabanIndexJ
- BALANCING_VALUE :
BALL::ShiftedLVMMMinimizer
- BaseIterator() :
BALL::BaseIterator< Container, DataType, Position, Traits
>
- baseName() :
BALL::FileSystem
- BATH_RELAXATION_TIME :
BALL::MolecularDynamics::MolecularDynamics::Option
- bath_relaxation_time_ :
BALL::CanonicalMD
- bb_dep_sets_ :
BALL::RotamerLibrary
- bb_indep_sets_ :
BALL::RotamerLibrary
- before() : BALL::String
- begin() :
BALL::ConstBidirectionalIterator< Container, DataType,
Position, Traits > ,
BALL::BidirectionalIterator< Container, DataType,
Position, Traits > ,
BALL::ConstForwardIterator< Container, DataType, Position,
Traits > ,
BALL::ForwardIterator< Container, DataType, Position,
Traits > ,
BALL::RandomAccessIterator< Container, DataType, Position,
Traits > ,
BALL::PDBRecords ,
BALL::ExpressionParser::ExpressionParser::SyntaxTree ,
BALL::AtomVector ,
BALL::Gradient ,
BALL::SmartsParser::SmartsParser::SPNode ,
BALL::VIEW::RepresentationManager
- beginBond() : BALL::Atom
- beginBox() :
BALL::HashGridBox3< Item >
- BendMap :
BALL::MMFF94BendParameters
- BidirectionalIterator() :
BALL::BidirectionalIterator< Container, DataType,
Position, Traits >
- BinaryFileAdaptor() :
BALL::BinaryFileAdaptor< T >
- BinaryProcessor() :
BALL::BinaryProcessor< T1, T2 >
- binaryRead() :
BALL::TRegularData1D< ValueType > ,
BALL::TRegularData2D< ValueType > ,
BALL::TRegularData3D< ValueType >
- binaryWrite() :
BALL::TRegularData1D< ValueType > ,
BALL::TRegularData2D< ValueType > ,
BALL::TRegularData3D< ValueType >
- binaryWriteRaw() :
BALL::TRegularData3D< ValueType >
- bind() :
BALL::Substring
- BindingPocketProcessor() :
BALL::BindingPocketProcessor
- Bit() : BALL::Bit
- BitVector() :
BALL::BitVector
- bitwiseAnd() :
BALL::BitVector
- bitwiseOr() :
BALL::BitVector
- bitwiseXor() :
BALL::BitVector
- blockname :
BALL::GAMESSDatFile::GAMESSDatFile::block
- blowUp() :
BALL::TriangulatedSurface
- BOHR_RADIUS :
BALL::Constant
- BOLTZMANN :
BALL::Constant
- Bond() : BALL::Bond
- bond_ :
BALL::SmartsParser::SmartsParser::SPEdge
- bond_angles_ :
BALL::HybridisationProcessor
- bond_format_ : BALL::MOLFile
- BOND_LENGTH_WEIGHTING :
BALL::AssignBondOrderProcessor::AssignBondOrderProcessor::Option
- bond_lengths_ :
BALL::BuildBondsProcessor
- bond_order_ :
BALL::SmartsParser::SmartsParser::SPBond
- bond_to_index_ :
BALL::RingPerceptionProcessor
- BondConstIterator : BALL::Atom
- BondConstReverseIterator : BALL::Atom
- BondIterator : BALL::Atom
- BONDLENGTHS_FILENAME :
BALL::BuildBondsProcessor::BuildBondsProcessor::Option ,
BALL::BuildBondsProcessor::BuildBondsProcessor::Default
- BondOrder : BALL::Bond
- BondPolarizabilities() :
BALL::BondPolarizabilities
- bondProperties() :
BALL::VIEW::MolecularControl
- BondReverseIterator : BALL::Atom
- BondType : BALL::Bond
- book_keeping_ : BALL::PDBFile
- BOOL :
BALL::NamedProperty
- BORDER :
BALL::FDPB::FDPB::Option ,
BALL::FDPB::FDPB::Default
- border_ :
BALL::VIEW::TilingRenderer
- bound_ :
BALL::CompositeIteratorTraits
- BOUNDARY :
BALL::FDPB::FDPB::Option ,
BALL::FDPB::FDPB::Default
- bounding_box_data_size :
BALL::TRRFile::TRRFile::TRRHeader
- BOUNDING_BOX_LOWER :
BALL::FDPB::FDPB::Option
- BOUNDING_BOX_UPPER :
BALL::FDPB::FDPB::Option
- Box() :
BALL::VIEW::Box
- BoxIterator :
BALL::HashGridBox3< Item >
- BRANCH_AND_BOUND_CUTOFF :
BALL::AssignBondOrderProcessor::AssignBondOrderProcessor::Option
- BREAK :
BALL::Processor
- browseChargesData() :
BALL::VIEW::DockDialog
- browseChargesRules() :
BALL::VIEW::DockDialog
- browseRadiiData() :
BALL::VIEW::DockDialog
- browseRadiiRules() :
BALL::VIEW::DockDialog
- Bruker1DFile() :
BALL::Bruker1DFile
- Bruker2DFile() :
BALL::Bruker2DFile
- BufferMode :
BALL::VIEW::GLRenderer
- bufferRepresentation() :
BALL::VIEW::RenderSetup ,
BALL::VIEW::GLRenderer ,
BALL::VIEW::Renderer ,
BALL::VIEW::TilingRenderer
- BUILD :
BALL::VIEW::MainControl
- build_bonds :
BALL::FragmentDB
- buildBondModels_() :
BALL::VIEW::AtomBondModelBaseProcessor
- buildBonds() :
BALL::VIEW::MolecularControl ,
BALL::VIEW::MolecularStructure
- buildBondsHashGrid3_() :
BALL::BuildBondsProcessor
- BuildBondsProcessor() :
BALL::BuildBondsProcessor
- buildChains() :
BALL::ChainBuilder
- buildConnection_() :
BALL::FragmentDB::FragmentDB::BuildBondsProcessor
- buildContextMenu() :
BALL::VIEW::TrajectoryController ,
BALL::VIEW::RegularData3DController ,
BALL::VIEW::DockResultController ,
BALL::VIEW::GeometricControl ,
BALL::VIEW::RaytraceableGridController ,
BALL::VIEW::VectorGridController ,
BALL::VIEW::DatasetController
- buildFragmentBonds() :
BALL::FragmentDB::FragmentDB::BuildBondsProcessor
- buildInterFragmentBonds() :
BALL::FragmentDB::FragmentDB::BuildBondsProcessor
- buildPeptide() :
BALL::VIEW::MolecularStructure
- buildVectorOfNonBondedAtomPairs() :
BALL::AmberNonBonded ,
BALL::CharmmNonBonded
- BURIAL_COUNT_RADIUS :
BALL::BindingPocketProcessor::BindingPocketProcessor::Option
- BURIAL_COUNT_THRESHOLD :
BALL::BindingPocketProcessor::BindingPocketProcessor::Option
- BURIAL_COUNT_THRESHOLD_HYDROGEN_FREE :
BALL::BindingPocketProcessor::BindingPocketProcessor::Option
- BuriedPolar() :
BALL::BuriedPolar
- button() :
BALL::VIEW::ButtonEvent
- buttonPressEvent() :
BALL::VIEW::Scene
- buttonReleaseEvent() :
BALL::VIEW::Scene
- buttons() :
BALL::VIEW::ButtonEvent
