Here is a list of all documented class members with links to the class documentation for each member:

- d -

• d : BALL::TLine3< T >
• D_1_ : BALL::ConjugateGradientMinimizer
• D_4_ : BALL::ConjugateGradientMinimizer
• data : BALL::GAMESSDatFile::GAMESSDatFile::block
• data_ : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
• DataIterator : BALL::HashGridBox3< Item >
• Dataset() : BALL::VIEW::Dataset
• DatasetControl() : BALL::VIEW::DatasetControl
• DataType : BALL::Spectrum< DataT, PeakT, PositionT >
• DCDFile() : BALL::DCDFile
• deactivate() : BALL::VIEW::ServerWidget
• DEBYE : BALL::FDPB::FDPB::Boundary
• decodeBase64() : BALL::String
• DEFAULT_FRAGMENT_DB : BALL::RotamerLibrary
• DEFAULT_LIBRARY : BALL::RotamerLibrary
• defaultsPressed() : BALL::VIEW::LightSettings
• DEG_PER_RAD : BALL::Constant
• DELETE_EXISTING_BONDS : BALL::BuildBondsProcessor::BuildBondsProcessor::Option , BALL::BuildBondsProcessor::BuildBondsProcessor::Default
• DELETE_OVERESTIMATED_BONDS : BALL::BuildBondsProcessor::BuildBondsProcessor::Option , BALL::BuildBondsProcessor::BuildBondsProcessor::Default
• deleteColumn_() : BALL::VIEW::DockResultDialog
• deleteCurrentItems() : BALL::VIEW::GenericControl , BALL::VIEW::GeometricControl , BALL::VIEW::MolecularControl
• deleteDataset() : BALL::VIEW::DatasetController
• deleteDataset_() : BALL::VIEW::DatasetController , BALL::VIEW::RegularData3DController , BALL::VIEW::TrajectoryController , BALL::VIEW::DockResultController , BALL::VIEW::VectorGridController , BALL::VIEW::RaytraceableGridController
• deleteDatasets() : BALL::VIEW::DatasetController
• deleteIsolatedEdges() : BALL::TriangulatedSurface
• deleteIsolatedPoints() : BALL::TriangulatedSurface
• deleteLine() : BALL::INIFile
• deleteOverestimatedBonds_() : BALL::BuildBondsProcessor
• deleteRotamer() : BALL::ResidueRotamerSet
• deleteRotamers() : BALL::ResidueRotamerSet
• deleteScoring() : BALL::DockResult
• deleteSection() : BALL::INIFile
• deleteSimilarFaces() : BALL::ReducedSurface
• deleteVariants() : BALL::Enumerator< Container, SiteIterator, Variant >
• Density() : BALL::Density
• Descriptor() : BALL::Descriptor
• deselect() : BALL::Composite , BALL::Selectable , BALL::VIEW::MolecularControl
• deselectCompositeRecursive() : BALL::VIEW::MainControl
• DESELECTED_COMPOSITE : BALL::VIEW::CompositeMessage
• destroy() : BALL::HashGrid3< Item > , BALL::HashSet< Key > , BALL::List< Value > , BALL::RegularExpression , BALL::String , BALL::Substring , BALL::StringHashMap< Value > , BALL::ResourceFile , BALL::Atom , BALL::AtomContainer , BALL::Bond , BALL::NucleicAcid , BALL::Nucleotide , BALL::PDBAtom , BALL::Protein , BALL::Residue , BALL::SecondaryStructure , BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits > , BALL::FDPB , BALL::SmartsMatcher::SmartsMatcher::RecStructPool_ , BALL::Directory , BALL::VIEW::ConnectionObject , BALL::VIEW::ModularWidget , BALL::Composite , BALL::PropertyManager , BALL::HashGridBox3< Item >
• destroyBond() : BALL::Atom
• destroyBonds() : BALL::Atom , BALL::AtomContainer
• destroyGrids() : BALL::FDPB
• determineMethodOfAtomPairGeneration() : BALL::AmberNonBonded , BALL::CharmmNonBonded , BALL::MMFF94NonBonded
• dfs() : BALL::RingFinder
• dG_free : BALL::CharmmEEF1::CharmmEEF1::Values
• dG_ref : BALL::CharmmEEF1::CharmmEEF1::Values
• dH_ref : BALL::CharmmEEF1::CharmmEEF1::Values
• DIELECTRIC_SMOOTHING : BALL::FDPB::FDPB::Option , BALL::FDPB::FDPB::Default
• difference() : BALL::Spectrum< DataT, PeakT, PositionT >
• dimension_ : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
• DIPOLE : BALL::FDPB::FDPB::Boundary
• DIRECT_RENDERING : BALL::VIEW::GLRenderer
• direction_ : BALL::EnergyMinimizer
• Directory() : BALL::Directory
• disable() : BALL::PeriodicBoundary , BALL::ResidueChecker
• disableAtoms() : BALL::SDFile
• disableLoggingToFile() : BALL::VIEW::MainControl
• disableOutput() : BALL::LogStream
• disableSelection() : BALL::ForceField , BALL::ResidueChecker
• Disc() : BALL::VIEW::Disc
• DISPLAY : BALL::VIEW::MainControl
• DISPLAY_ANIMATION : BALL::VIEW::MainControl
• DISPLAY_CREATE : BALL::VIEW::MainControl
• DISPLAY_LISTS_RENDERING : BALL::VIEW::GLRenderer
• DISPLAY_STEREO : BALL::VIEW::MainControl
• DISPLAY_VIEWPOINT : BALL::VIEW::MainControl
• DISPLAYLIST_NOT_DEFINED : BALL::VIEW::GLDisplayList
• DisplayProperties() : BALL::VIEW::DisplayProperties
• DISTANCE_DEPENDENT_DIELECTRIC : BALL::AmberFF::AmberFF::Option , BALL::AmberFF::AmberFF::Default , BALL::CharmmFF::CharmmFF::Option , BALL::MMFF94::MMFF94::Default , BALL::CharmmFF::CharmmFF::Default
• Division() : BALL::Division< First, Second, DataType >
• DockDialog() : BALL::VIEW::DockDialog
• docking_algorithm_ : BALL::DockResult
• docking_options_ : BALL::DockResult
• DockingController() : BALL::VIEW::DockingController
• DockingThread() : BALL::VIEW::DockingThread
• DockProgressDialog() : BALL::VIEW::DockProgressDialog
• DockResult() : BALL::DockResult
• DockResultDialog() : BALL::VIEW::DockResultDialog
• DockWidget() : BALL::VIEW::DockWidget
• doFFT() : BALL::TFFT1D< ComplexTraits > , BALL::TFFT3D< ComplexTraits > , BALL::TFFT2D< ComplexTraits >
• doiFFT() : BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• donor_list_ : BALL::HBondShiftProcessor
• DOUBLE : BALL::NamedProperty
• downwardClicked() : BALL::VIEW::DockResultDialog
• draw() : BALL::VIEW::MeshBuffer , BALL::VIEW::GLDisplayList
• drawBuffered() : BALL::VIEW::GLRenderer
• DSN6File() : BALL::DSN6File
• DUAL_VIEW_DIFFERENT_DISPLAY_STEREO : BALL::VIEW::GLRenderer
• DUAL_VIEW_STEREO : BALL::VIEW::GLRenderer
• dump() : BALL::Substring , BALL::VIEW::AddVanDerWaalsModel , BALL::VIEW::Vertex , BALL::VIEW::TwoColoredTube , BALL::Chain , BALL::VIEW::ConnectionObject , BALL::VIEW::CompositeManager , BALL::VIEW::TwoColoredLine , BALL::VIEW::AddBallAndStickModel , BALL::VIEW::Box , BALL::VIEW::Disc , BALL::Molecule , BALL::VIEW::PreferencesEntry , BALL::VIEW::AddLineModel , BALL::VIEW::MultiColorExtension , BALL::Protein , BALL::VIEW::Camera , BALL::Pair6_12RDFIntegrator , BALL::TVector4< T > , BALL::TBox3< T > , BALL::VIEW::ModelProcessor , BALL::VIEW::AtomBondModelBaseProcessor , BALL::TSphere3< T > , BALL::PiecewiseFunction , BALL::VIEW::RepresentationManager , BALL::VIEW::GLDisplayList , BALL::Atom , BALL::TSimpleBox3< T > , BALL::VIEW::GeometricObject , BALL::TQuaternion< T > , BALL::VIEW::ServerWidget , BALL::Embeddable , BALL::TPlane3< T > , BALL::VIEW::MainControl , BALL::PDBAtom , BALL::VIEW::Scene , BALL::TCPTransfer , BALL::TAngle< T > , BALL::VIEW::ModularWidget , BALL::RadialDistributionFunction , BALL::SecondaryStructure , BALL::VIEW::Vertex2 , BALL::Client , BALL::TLine3< T > , BALL::LogStreamBuf , BALL::HashSet< Key > , BALL::RegularExpression , BALL::VIEW::ColorRGBA , BALL::Bond , BALL::Fragment , BALL::PairExpRDFIntegrator , BALL::VIEW::Sphere , BALL::Timer , BALL::SmartsMatcher::SmartsMatcher::RecStruct_ , BALL::VIEW::AddBackboneModel , BALL::VIEW::Point , BALL::TVector2< T > , BALL::Nucleotide , BALL::VIEW::Label , BALL::VIEW::SimpleBox , BALL::VIEW::ColorHSV , BALL::VIEW::Tube , BALL::PiecewisePolynomial , BALL::TVector3< T > , BALL::TCircle3< T > , BALL::VIEW::Line , BALL::Residue , BALL::VIEW::ColorExtension2 , BALL::VIEW::ColorMap , BALL::Options , BALL::AtomContainer , BALL::HashGrid3< Item > , BALL::VIEW::PyWidget , BALL::PropertyManager , BALL::VIEW::LightSource , BALL::VIEW::Mesh , BALL::TMatrix4x4< T > , BALL::VIEW::Representation , BALL::Composite , BALL::VIEW::AddSurfaceModel , BALL::NucleicAcid , BALL::VIEW::ColorUnit , BALL::VIEW::ColorUnitHue , BALL::VIEW::MultiLine , BALL::VIEW::Stage , BALL::VIEW::ColorProcessor
• dumpTree() : BALL::SmartsParser
• dumpTreeRecursive_() : BALL::SmartsParser
• duplicateKeyCheckEnabled() : BALL::INIFile