Here is a list of all class members with links to the classes they belong to:

- i -

• I : BALL::Element
• i : BALL::MMFF94OutOfPlaneBend::OutOfPlaneBend , BALL::TQuaternion< T >
• ic_ : BALL::MMFF94TorsionParameters
• IconLoader() : BALL::VIEW::IconLoader
• icosaeder() : BALL::TriangulatedSphere
• icosaeder_steps_ : BALL::VIEW::FieldLineCreator
• id : BALL::FlexibleMolecule
• ID : BALL::QSAR::InputPartitioningConfiguration , BALL::StaticLigandFragment
• id : BALL::VIEW::ChannelFormat
• id_ : BALL::PDBInfo , BALL::VIEW::DisplayProperties , BALL::VIEW::LabelDialog
• ID_code : BALL::PDB::RecordHEADER
• id_code : BALL::PDB::RecordSEQADV , BALL::PDB::RecordSPRSDE
• id_to_menu_ : BALL::VIEW::MainControl
• id_to_type_ : BALL::MMFF94AtomTyper
• idChanged() : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile
• IDENTIFIER : BALL::RegularExpression
• identifyDisplays() : BALL::VIEW::StageSettings
• idx_start_data_ : BALL::AmiraMeshFile
• ignore_ : BALL::VIEW::AtomOverview , BALL::VIEW::LightSettings
• ignore_atoms_ : BALL::CreateSpectrumProcessor
• ignore_change_ : BALL::VIEW::GeometricControl
• ignore_event_ : BALL::VIEW::HelpViewer
• ignore_events_ : BALL::VIEW::GLRenderWindow
• IGNORE_H_CLASHES : BALL::ScoringFunction::Default , BALL::ScoringFunction::Option
• ignore_h_clashes_ : BALL::ScoringFunction
• ignore_messages_ : BALL::VIEW::MolecularControl
• ignore_other_chain_ : BALL::AnisotropyShiftProcessor
• ignore_pick_ : BALL::VIEW::PickingMode
• IGNORE_SECTION_NAME : BALL::CreateSpectrumProcessor
• IGNORE_XPLOR_PSEUDO_ATOMS : BALL::PDBFile::Default , BALL::PDBFile::Option
• ignore_xplor_pseudo_atoms_ : BALL::PDBFile
• ignoreEvents() : BALL::VIEW::GLRenderWindow
• ile_pressed() : BALL::VIEW::PeptideDialog
• IllegalKey() : BALL::HashMap< Key, T >::IllegalKey , BALL::HashSet< Key >::IllegalKey
• IllegalOperation() : BALL::Bit::IllegalOperation
• IllegalPosition() : BALL::Exception::IllegalPosition
• IllegalSelfOperation() : BALL::Exception::IllegalSelfOperation
• IllegalStateException() : BALL::GRAPH::IllegalStateException
• IllegalTreeOperation() : BALL::Exception::IllegalTreeOperation
• ILP : BALL::AssignBondOrderProcessor::Algorithm
• ilp_ : BALL::ILPBondOrderStrategy
• ILPBondOrderStrategy : BALL::AssignBondOrderProcessor , BALL::ILPBondOrderStrategy
• image_cache_ : BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile , BALL::VIEW::GenerateCrystalDialog
• IMGDock() : BALL::IMGDock
• immune_ : BALL::GeneticAlgorithm
• IMPLICIT_HYDROGENS : BALL::SmartsParser::SPAtom
• implicitSelection() : BALL::QSAR::FeatureSelection
• important_ : BALL::VIEW::LogEvent
• important_text_in_statusbar_ : BALL::VIEW::MainControl
• importModule() : BALL::PyInterpreter
• IMPROVED : BALL::StrangLBFGSMinimizer::Default , BALL::StrangLBFGSMinimizer::Option
• improved_ : BALL::StrangLBFGSMinimizer
• In : BALL::Element
• IN_BRACKETS : BALL::SmartsParser::SPAtom
• in_brackets_ : BALL::SmilesParser::SPAtom
• IN_NUM_RINGS : BALL::SmartsParser::SPAtom
• IN_RING : BALL::SDGenerator , BALL::SmartsParser::SPBond
• IN_RING_SIZE : BALL::SmartsParser::SPAtom
• IN_SC_SEPERATOR : BALL::VIEW::ShortcutRegistry
• inBlock() : BALL::GAMESSDatFile
• INCLUDE_ALL : BALL::MolecularGraph
• IncompatibleCoordinateSets() : BALL::RMSDMinimizer::IncompatibleCoordinateSets
• IncompatibleIndex() : BALL::EnumeratorIndex::IncompatibleIndex
• IncompatibleIterators() : BALL::Exception::IncompatibleIterators
• incomplete_line_ : BALL::LogStreamBuf
• InconsistentUsage() : BALL::QSAR::Exception::InconsistentUsage
• inDatablock() : BALL::CIFFile
• indent() : BALL::TextPersistenceManager
• index : BALL::FDPB::FastAtomStruct , BALL::FPTBondOrderStrategy::BackTrackingState_
• index_ : BALL::Exception::IndexOverflow , BALL::Exception::IndexUnderflow , BALL::GraphEdge< Vertex, Edge, Face > , BALL::GraphFace< Vertex, Edge, Face > , BALL::GraphTriangle< Vertex, Edge, Face > , BALL::GraphVertex< Vertex, Edge, Face > , BALL::SnapShot , BALL::TContour< T > , BALL::TContourLine< T > , BALL::VIEW::DockResultDialog::Compare_
• index_of_free_vect_ : BALL::StrangLBFGSMinimizer
• index_to_bond_ : BALL::AssignBondOrderProcessor , BALL::RingPerceptionProcessor
• index_to_free_bond_ : BALL::ILPBondOrderStrategy
• index_to_vertex_ : BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >
• IndexAtomMap : BALL::KCFFile
• IndexOverflow() : BALL::Exception::IndexOverflow
• IndexType : BALL::TFFT2D< ComplexTraits > , BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType >::IndexType , BALL::TRegularData3D< ValueType >::IndexType
• IndexUnderflow() : BALL::Exception::IndexUnderflow
• indices_ : BALL::ClaverieParameter
• indirect_shift_ratio : BALL::NMRStarFile::ShiftReferenceElement
• INDIUM : BALL::Element
• infile_ : BALL::VIEW::TestFramework
• infinite_penalty : BALL::FPTBondOrderStrategy
• info() : BALL::LogStream , BALL::PDBFile
• info_color_ : BALL::VIEW::Stage
• info_point_ : BALL::VIEW::Scene
• info_string_ : BALL::VIEW::Scene
• InfoDisplayStyle : BALL::VIEW::PubChemDialog
• information_ : BALL::VIEW::MolecularControl , BALL::VIEW::Representation
• INFORMATION_LEVEL : BALL::LogStream
• information_templates_ : BALL::VIEW::PubChemDialog
• inFourierSpace_ : BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• INI_file_ : BALL::Parameters
• INI_FILE_NAME : BALL::BindingPocketProcessor::Default , BALL::BindingPocketProcessor::Option
• INIFile : BALL::AssignBondOrderProcessor::Default , BALL::AssignBondOrderProcessor::Option , BALL::INIFile , BALL::INIFile::IteratorTraits_ , BALL::INIFile::Section , BALL::Peptides::NameConverter::Default , BALL::Peptides::NameConverter::Option
• inifile_section_name_ : BALL::VIEW::PreferencesEntry
• init() : BALL::AnisotropyShiftProcessor , BALL::AStarBondOrderStrategy , BALL::BondOrderAssignmentStrategy , BALL::BranchAndBoundBondOrderStrategy , BALL::CreateSpectrumProcessor , BALL::DCDFile , BALL::EFShiftProcessor , BALL::EmpiricalHSShiftProcessor , BALL::ForceFieldParameters , BALL::FPTBondOrderStrategy , BALL::FragmentDB , BALL::GlobalInitializer , BALL::HaighMallionShiftProcessor , BALL::HBondProcessor , BALL::HBondShiftProcessor , BALL::ILPBondOrderStrategy , BALL::JohnsonBoveyShiftProcessor , BALL::KGreedyBondOrderStrategy , BALL::MPISupport , BALL::Parameters , BALL::RandomCoilShiftProcessor , BALL::ShiftModule , BALL::TRRFile , BALL::VIEW::CudaVolumeRenderer , BALL::VIEW::GLRenderer , BALL::VIEW::GLRenderWindow , BALL::VIEW::InteractionModeManager , BALL::VIEW::POVRenderer , BALL::VIEW::Renderer , BALL::VIEW::RenderSetup , BALL::VIEW::RenderTarget , BALL::VIEW::RTfactRenderer , BALL::VIEW::Scene , BALL::VIEW::STLRenderer , BALL::VIEW::TRenderWindow< taPixelDatatype > , BALL::VIEW::VRMLRenderer , BALL::VIEW::XML3DRenderer
• init_() : BALL::PDBFile , BALL::ShiftModel1D , BALL::ShiftModel2D , BALL::ShiftModel , BALL::VIEW::MainControl
• initAlwaysFront() : BALL::VIEW::GLRenderer
• initDemo_() : BALL::VIEW::DemoTutorialDialog
• initDrawingMeshes_() : BALL::VIEW::GLRenderer
• initDrawingOthers_() : BALL::VIEW::GLRenderer
• initElementSymbols() : BALL::GAFFCESParser
• inItem() : BALL::CIFFile
• initFFTGrid_() : BALL::GeometricFit
• initGL() : BALL::VIEW::MeshBuffer
• initGLU_() : BALL::VIEW::GLRenderer
• initGridSizes_() : BALL::GeometricFit
• initial_atoms_ : BALL::ShiftedLVMMMinimizer , BALL::StrangLBFGSMinimizer
• INITIAL_CAPACITY : BALL::HashSet< Key >
• initial_database_segment : BALL::PDB::RecordDBREF
• initial_energy_ : BALL::EnergyMinimizer
• initial_grad_ : BALL::EnergyMinimizer
• INITIAL_NUMBER_OF_BUCKETS : BALL::HashSet< Key >
• INITIAL_POPULATION : BALL::EvolutionaryDocking::Default , BALL::EvolutionaryDocking::Option
• initial_residue : BALL::PDB::RecordHELIX , BALL::PDB::RecordSHEET , BALL::PDB::RecordTURN
• initial_sequence : BALL::PDB::RecordDBREF
• initialize() : BALL::PyInterpreter , BALL::RuleEvaluator , BALL::RuleProcessor , BALL::VIEW::MeshBuffer
• initialize_() : BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
• initializeBasisSet() : BALL::GAMESSLogFile
• initialized_ : BALL::Path
• INITIALIZED_HEAD_CFS : BALL::SDGenerator
• initializeHashGrid() : BALL::ScoringFunction
• initializeInputStream() : BALL::PersistenceManager , BALL::XDRPersistenceManager
• initializeMembers_() : BALL::VIEW::Scene
• initializeOutputStream() : BALL::PersistenceManager , BALL::XDRPersistenceManager
• initializePreferencesTab() : BALL::VIEW::DisplayProperties , BALL::VIEW::ModularWidget , BALL::VIEW::PyWidget , BALL::VIEW::Scene , BALL::VIEW::ServerWidget
• initializePreferencesTab_() : BALL::VIEW::MainControl
• initializeRNG() : BALL::GenericGene
• initializeWidget() : BALL::VIEW::AssignBondOrderConfigurationDialog , BALL::VIEW::AssignBondOrderResultsDialog , BALL::VIEW::DatasetControl , BALL::VIEW::DemoTutorialDialog , BALL::VIEW::DisplayProperties , BALL::VIEW::DockDialog , BALL::VIEW::DockingController , BALL::VIEW::DockWidget , BALL::VIEW::DownloadElectronDensity , BALL::VIEW::DownloadPDBFile , BALL::VIEW::EditFunctions , BALL::VIEW::FileObserver , BALL::VIEW::GenericControl , BALL::VIEW::GeometricControl , BALL::VIEW::HelpViewer , BALL::VIEW::LabelDialog , BALL::VIEW::LogView , BALL::VIEW::ModularWidget , BALL::VIEW::MolecularControl , BALL::VIEW::MolecularFileDialog , BALL::VIEW::MolecularStructure , BALL::VIEW::OpenBruker1DFile , BALL::VIEW::OpenBruker2DFile , BALL::VIEW::PluginDialog , BALL::VIEW::PubChemDialog , BALL::VIEW::PyWidget , BALL::VIEW::Scene , BALL::VIEW::ServerWidget , BALL::VIEW::ShortcutDialog , BALL::VIEW::StereoSettingsDialog , BALL::VIEW::TestFramework , BALL::VIEW::UndoManagerDialog
• initPenaltyData_() : BALL::FPTBondOrderStrategy
• initPersistenceManager() : BALL::MoleculeObjectCreator , BALL::ObjectCreator
• initPerspective() : BALL::VIEW::GLRenderer
• initPopupMenu() : BALL::VIEW::MainControl
• initRead_() : BALL::CIFFile , BALL::GAMESSDatFile , BALL::GAMESSLogFile , BALL::GenericMolFile , BALL::HINFile
• initSolid() : BALL::VIEW::GLRenderer
• initSpaceGroupList() : BALL::VIEW::GenerateCrystalDialog
• initStringToWildcard() : BALL::GAFFCESParser::CESPredicate
• initTable() : BALL::ParsedFunction< arg >
• initTransparent() : BALL::VIEW::GLRenderer
• initTutorials_() : BALL::VIEW::DemoTutorialDialog
• initType_() : BALL::VIEW::RenderSetup
• initWardDistance_() : BALL::PoseClustering
• initWrite_() : BALL::GenericMolFile
• inMoveMode() : BALL::VIEW::Scene
• INNER_BAG : BALL::TreeWidth< UndirectedGraph >
• inorder() : BALL::FPTBondOrderStrategy::DPBackTracking_ , BALL::GRAPH::PostOrderFolding< Tree, From, To, Functor >
• input : BALL::VIEW::RunPythonThread
• input_ : BALL::TreeWidth< UndirectedGraph >
• input_conformations_ : BALL::Result
• input_conformations_map_ : BALL::Result
• input_file : BALL::QSAR::InputPartitioningConfiguration
• input_is_temporary_ : BALL::GenericMolFile
• InputConfiguration() : BALL::QSAR::InputConfiguration
• InputDeviceDriver() : BALL::VIEW::InputDeviceDriver
• InputPartitioningConfiguration() : BALL::QSAR::InputPartitioningConfiguration
• InRingPredicate() : BALL::InRingPredicate
• inSafeframe() : BALL::CIFFile
• insert() : BALL::AtomContainer , BALL::Chain , BALL::Client , BALL::FPTBondOrderStrategy::DPTable_ , BALL::GeneticIndividual , BALL::GraphFace< Vertex, Edge, Face > , BALL::GraphVertex< Vertex, Edge, Face > , BALL::HashGrid3< Item > , BALL::HashGridBox3< Item > , BALL::HashSet< Key > , BALL::LogStream , BALL::Molecule , BALL::Nucleotide , BALL::PDBRecords , BALL::ReducedSurface , BALL::Residue , BALL::ResourceEntry , BALL::ResourceFile , BALL::SecondaryStructure , BALL::String , BALL::StringHashMap< Value > , BALL::System , BALL::TriangulatedSurface , BALL::VIEW::CompositeManager , BALL::VIEW::MainControl , BALL::VIEW::Representation , BALL::VIEW::RepresentationManager
• insert_() : BALL::Peptides::PeptideBuilder , BALL::VIEW::EditMode , BALL::VIEW::PeptideDialog , BALL::VIEW::PubChemDialog , BALL::VIEW::Scene
• insert_seq() : BALL::VIEW::PeptideDialog
• insertAfter() : BALL::AtomContainer , BALL::Chain , BALL::Composite , BALL::Molecule , BALL::Nucleotide , BALL::Residue , BALL::SecondaryStructure , BALL::System
• insertAtom() : BALL::GAMESSDatFile , BALL::GAMESSLogFile
• insertAtom_() : BALL::VIEW::AtomBondModelBaseProcessor
• insertBefore() : BALL::AtomContainer , BALL::Chain , BALL::Composite , BALL::Molecule , BALL::Nucleotide , BALL::Residue , BALL::SecondaryStructure , BALL::System
• insertBlockedData() : BALL::GAMESSDatFile
• insertBond() : BALL::GAMESSDatFile , BALL::GAMESSLogFile
• insertChild() : BALL::ResourceEntry
• insertChildEntry() : BALL::VIEW::Preferences
• insertClippingPlane() : BALL::VIEW::RepresentationManager
• insertComponent() : BALL::ForceField , BALL::ScoringFunction
• insertComponents_() : BALL::MMFF94
• insertDatablock() : BALL::CIFFile
• insertDatacontent() : BALL::CIFFile::Datablock
• insertDataset() : BALL::VIEW::DatasetController
• insertDeleteEntry() : BALL::VIEW::MainControl
• inserted_atoms_ : BALL::ReconstructFragmentProcessor
• insertEntry() : BALL::VIEW::Preferences
• insertGrid_() : BALL::VIEW::GridVisualizationDialog , BALL::VIEW::ModifyRepresentationDialog
• insertHotkey() : BALL::VIEW::PyWidget
• insertion_code : BALL::PDB::RecordDBREF::EndingDatabaseSegment , BALL::PDB::RecordDBREF::EndingSequence , BALL::PDB::RecordDBREF::InitialDatabaseSegment , BALL::PDB::RecordDBREF::InitialSequence , BALL::PDB::Residue
• insertion_code_ : BALL::PDBFile
• insertLine() : BALL::INIFile
• insertMenuEntry() : BALL::VIEW::MainControl , BALL::VIEW::ModularWidget
• insertMenuEntry_() : BALL::VIEW::DatasetController
• insertNCS() : BALL::CrystalInfo
• insertNotification() : BALL::LogStream
• insertParent() : BALL::Composite
• insertPopupMenuSeparator() : BALL::VIEW::MainControl
• insertSibling() : BALL::ResourceEntry
• insertStackEntry_() : BALL::VIEW::PreferencesEntry
• insertSubstance() : BALL::QSAR::QSARData
• insertTriangle_() : BALL::VIEW::AddCartoonModel
• insertTurn_() : BALL::SecondaryStructureProcessor
• insertValue() : BALL::INIFile
• instance() : BALL::PluginManager , BALL::VIEW::IconLoader , BALL::VIEW::UIOperationMode
• instance_ : BALL::VIEW::UIOperationMode
• instance_handles : BALL::VIEW::RTfactRenderer::RTfactData
• instr() : BALL::String
• INT : BALL::NamedProperty
• int_value : BALL::SmartsParser::SPAtom::PropertyValue
• INT_VALUE_NA : BALL::NMRStarFile
• IntEditorWidget() : BALL::VIEW::IntEditorWidget
• INTEGER : BALL::RegularExpression
• integrate() : BALL::NumericalIntegrator< Function, DataType > , BALL::Pair6_12RDFIntegrator , BALL::PairExpRDFIntegrator , BALL::RombergIntegrator< Function, DataType >
• integrateToInf() : BALL::Pair6_12RDFIntegrator , BALL::PairExpRDFIntegrator
• IntegrationMethod : BALL::Pair6_12RDFIntegrator
• intend_ : BALL::VIEW::PyWidget
• intensity : BALL::JohnsonBoveyShiftProcessor::Ring
• intensity_ : BALL::Peak< PositionType > , BALL::VIEW::LightSource
• intensity_factors_ : BALL::HaighMallionShiftProcessor
• intensityChanged() : BALL::VIEW::LightSettings
• intensityMaxChanged() : BALL::VIEW::LightSettings
• inter_bonds : BALL::MOL2File::SubstructureStruct
• interaction_no_scale_ : BALL::ScoreGridSet
• interaction_score : BALL::ScoringFunction::Result
• InteractionMode() : BALL::VIEW::InteractionMode
• InteractionModeManager() : BALL::VIEW::InteractionModeManager
• interactions : BALL::Atom
• intercept_ : BALL::ScoringFunction
• INTERLACED_STEREO : BALL::VIEW::Renderer
• internal_ : BALL::SmartsParser::SPEdge , BALL::SmartsParser::SPNode
• interpol12() : BALL::TContourLine< T >
• interpol18() : BALL::TContourLine< T >
• interpol24() : BALL::TContourLine< T >
• interpol48() : BALL::TContourLine< T >
• interpolate_() : BALL::VIEW::AddBackboneModel
• interpolateColor() : BALL::VIEW::InterpolateColorProcessor
• InterpolateColorProcessor() : BALL::VIEW::InterpolateColorProcessor
• interpolated_points_ : BALL::VIEW::AddBackboneModel
• interpolation_boundaries_ : BALL::VIEW::ColorMap
• interpolation_steps_ : BALL::VIEW::AddBackboneModel , BALL::VIEW::FieldLineCreator
• interpretRecord() : BALL::PDBFile
• Intersection : BALL::SESSingularityCleaner
• intersection_point0_ : BALL::RSEdge
• intersection_point1_ : BALL::RSEdge
• intersectRaysWithGeometry() : BALL::VIEW::RaytracingRenderer , BALL::VIEW::RTfactRenderer
• intervals_ : BALL::PiecewiseFunction
• INTRODUCE_BAG : BALL::TreeWidth< UndirectedGraph >
• inv_norm : BALL::Gradient
• INVALID : BALL::ExpressionTree
• invalid_records_ : BALL::PDBInfo
• InvalidActivityID() : BALL::QSAR::Exception::InvalidActivityID
• InvalidArgument() : BALL::Exception::InvalidArgument
• invalidate() : BALL::Atom::BondIteratorTraits , BALL::BaseIterator< Container, DataType, Position, Traits > , BALL::Composite::AncestorIteratorTraits , BALL::Composite::ChildCompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits , BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ , BALL::Gradient , BALL::HashGrid3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::DataIteratorTraits , BALL::HashSet< Key >::IteratorTraits , BALL::ResourceEntry::IteratorTraits_
• invalidateGrid_() : BALL::VIEW::ModifyRepresentationDialog
• invalidateMesh_() : BALL::VIEW::ModifyRepresentationDialog
• InvalidClient() : BALL::Client::InvalidClient
• invalidDescriptors_ : BALL::QSAR::QSARData
• InvalidFormat() : BALL::Exception::InvalidFormat
• InvalidIterator() : BALL::Exception::InvalidIterator
• InvalidOption() : BALL::Exception::InvalidOption
• InvalidRange() : BALL::Exception::InvalidRange
• InvalidSize() : BALL::Exception::InvalidSize
• invalidSubstances_ : BALL::QSAR::QSARData
• InvalidSubstring() : BALL::Substring::InvalidSubstring
• inverse_mapping_ : BALL::TRegularData3D< ValueType >
• inversion_retention : BALL::MOLFile::AtomStruct
• invert() : BALL::TMatrix4x4< T >
• io_service_ : BALL::TCPServer
• IODINE : BALL::Element
• ION_RADIUS : BALL::FDPB::Default , BALL::FDPB::Option
• IONIC_STRENGTH : BALL::FDPB::Default , BALL::FDPB::Option
• Ir : BALL::Element
• ir_size : BALL::TRRFile::TRRHeader
• IRIDIUM : BALL::Element
• IRON : BALL::Element
• is3Prime() : BALL::Nucleotide
• is5Prime() : BALL::Nucleotide
• is_1_4 : BALL::MMFF94NonBonded::NonBondedPairData
• IS_3_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• IS_4_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• IS_5_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• IS_6_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• IS_7_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• IS_8_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• IS_9_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• IS_AROMATIC : BALL::Bond
• is_aromatic_ : BALL::SmilesParser::SPAtom
• is_bracketed_ : BALL::LineSearch
• is_command_line_ : BALL::VIEW::TestFramework
• is_complete : BALL::HBondProcessor::ResidueData
• is_current_ : BALL::VIEW::InteractionMode
• is_defined_ : BALL::CharmmEEF1 , BALL::LennardJones , BALL::Potential1210 , BALL::QuadraticBondStretch
• is_given : BALL::PDB::RecordMTRIX1 , BALL::PDB::RecordMTRIX2 , BALL::PDB::RecordMTRIX3
• is_hydrogen_bond_ : BALL::VanDerWaalsSlick
• is_initialized_ : BALL::MMFF94ParametersBase
• is_linear : BALL::MMFF94StretchBend::Bend
• is_locked_ : BALL::VIEW::ServerWidget::BALLViewServer
• is_loop : BALL::CIFFile::Item
• IS_NON_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• is_not_ : BALL::SmartsParser::SPEdge , BALL::SmartsParser::SPNode
• is_open_ : BALL::File
• is_orthogonal_ : BALL::TRegularData3D< ValueType >
• IS_OTHER_RING : BALL::GAFFCESParser::APSMatcher
• IS_PLANAR : BALL::GAFFCESParser::APSMatcher
• IS_PLANAR_WITH_DB_TO_NR : BALL::GAFFCESParser::APSMatcher
• is_proline_ : BALL::Peptides::PeptideBuilder
• IS_PURELY_ALIPHATIC : BALL::GAFFCESParser::APSMatcher
• IS_PURELY_AROMATIC : BALL::GAFFCESParser::APSMatcher
• is_recording_ : BALL::VIEW::EditSingleShortcut
• IS_RING_ATOM : BALL::GAFFCESParser::APSMatcher
• is_running_ : BALL::TCPServerThread
• is_saveframe : BALL::CIFFile::Datacontent
• IS_SIMPLICIAL : BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >
• IS_SOLVENT : BALL::Molecule
• is_static : BALL::MOL2File::SetStruct
• is_temporary_ : BALL::File
• is_valid_position_ : BALL::Enumerator< Container, SiteIterator, Variant >
• is_water : BALL::PDB::RecordFORMUL
• isAboutToQuit() : BALL::VIEW::MainControl , BALL::VIEW::RenderSetup
• isAccessible() : BALL::File
• isActive() : BALL::BALLPlugin , BALL::VIEW::ClippingPlane , BALL::VIEW::VIEWPlugin
• isAdvanced() : BALL::VIEW::UIOperationMode
• isAlnum() : BALL::String
• isAlpha() : BALL::String
• isAlphaEnabled() : BALL::VIEW::ColorButton
• isAltered() : BALL::GeneticIndividual
• isAminoAcid() : BALL::Residue
• isAminoAcid_() : BALL::VIEW::PeptideDialog
• isAncestorOf() : BALL::Composite , BALL::ResourceEntry
• isAnimationRunning() : BALL::VIEW::Scene
• isAnyBit() : BALL::BitVector
• isAromatic() : BALL::Bond , BALL::SmilesParser::SPAtom
• isAtom() : BALL::Atom , BALL::Composite
• isAtomPairwise() : BALL::ScoringComponent
• isAutoDeletable() : BALL::AutoDeletable
• isBackboneDependent() : BALL::RotamerLibrary
• isBallAndStickModel() : BALL::VIEW::AddBallAndStickModel
• isBeeingRendered() : BALL::VIEW::RepresentationManager
• isBegin() : BALL::Atom::BondIteratorTraits , BALL::Composite::AncestorIteratorTraits , BALL::Composite::ChildCompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits , BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits > , BALL::ConstForwardIterator< Container, DataType, Position, Traits > , BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ , BALL::HashGrid3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::DataIteratorTraits , BALL::HashSet< Key >::IteratorTraits , BALL::ResourceEntry::IteratorTraits_
• isBondOf() : BALL::Bond
• isBool() : BALL::Options
• isBound() : BALL::Atom , BALL::Bond , BALL::Substring
• isBoundTo() : BALL::Atom
• isBracketed() : BALL::LineSearch
• isBusy() : BALL::VIEW::MainControl , BALL::VIEW::MeshBuffer
• isCanonized() : BALL::File
• isCentralRing_() : BALL::RingAnalyser
• isChain() : BALL::Chain , BALL::Composite
• isChildOf() : BALL::Composite , BALL::ResourceEntry
• isClosed() : BALL::File
• isCompileAndExecuteMode() : BALL::VIEW::GLDisplayList
• isCompileMode() : BALL::VIEW::GLDisplayList
• isCompressedFile() : BALL::GenericMolFile
• isConnectionObjectRegistered() : BALL::VIEW::ConnectionObject
• isContinuous() : BALL::VIEW::Renderer , BALL::VIEW::RenderSetup
• isConverged() : BALL::EnergyMinimizer
• isCTerminal() : BALL::Residue
• isCurrent() : BALL::Directory , BALL::VIEW::InteractionMode
• isDataCentered() : BALL::QSAR::QSARData
• isDefaultPositionAddress() : BALL::VIEW::Sphere
• isDefaultVertex1Address() : BALL::VIEW::Vertex2
• isDefaultVertex2Address() : BALL::VIEW::Vertex2
• isDefaultVertexAddress() : BALL::VIEW::Vertex
• isDefaultVertexAddresses() : BALL::VIEW::Vertex2
• isDeletable() : BALL::VIEW::Message
• isDescendantOf() : BALL::Composite , BALL::ResourceEntry
• isDiagonal() : BALL::TMatrix4x4< T >
• isDigit() : BALL::String
• isDiscrete() : BALL::EmpiricalHSShiftProcessor::PropertiesForShift_
• isEditable() : BALL::VIEW::PropEditorWidget , BALL::VIEW::PropertyEditor
• isEmpty() : BALL::Composite , BALL::Directory , BALL::HashGrid3< Item > , BALL::HashGridBox3< Item > , BALL::HashSet< Key > , BALL::List< Value > , BALL::RegularExpression , BALL::ResourceEntry , BALL::ResourceFile , BALL::String , BALL::StringHashMap< Value > , BALL::Substring , BALL::TSphere3< T >
• isEnabled() : BALL::ForceFieldComponent , BALL::PeriodicBoundary , BALL::ResidueChecker , BALL::ScoreGridSet , BALL::ScoringComponent , BALL::VIEW::InputDeviceDriver
• isEnd() : BALL::Atom::BondIteratorTraits , BALL::Composite::AncestorIteratorTraits , BALL::Composite::ChildCompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits , BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits > , BALL::ConstForwardIterator< Container, DataType, Position, Traits > , BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ , BALL::HashGrid3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::DataIteratorTraits , BALL::HashSet< Key >::IteratorTraits , BALL::ResourceEntry::IteratorTraits_
• isEqual() : BALL::Comparator< T > , BALL::TMatrix4x4< T >
• isEquivalent() : BALL::TAngle< T >
• isEveryBit() : BALL::BitVector
• isExcludedByLevelOfDetail_() : BALL::PoseClustering
• isExecutable() : BALL::File
• isExtensionSupported() : BALL::VIEW::GLRenderer
• isFileExtensionSupported() : BALL::MolFileFactory , BALL::TrajectoryFileFactory
• isFinished() : BALL::ConnectedToPredicate::CTPNode
• isFirstChild() : BALL::Composite
• isFirstChildOf() : BALL::Composite
• isFloat() : BALL::String
• isFragment() : BALL::Composite , BALL::Fragment
• isFree() : BALL::RSEdge , BALL::SASEdge , BALL::SESEdge , BALL::SESFace
• isFull() : BALL::VIEW::UIOperationMode
• isGeminal() : BALL::Atom
• isgiven : BALL::PDB::Structure::NCSMatrix
• isgivenNCS() : BALL::CrystalInfo
• isGreater() : BALL::Comparator< T >
• isGreaterOrEqual() : BALL::Comparator< T >
• isGridable() : BALL::ScoringComponent
• isGridSizePowerOfTwo() : BALL::VIEW::RegularData3DController
• isHeteroAtom_() : BALL::PDBFile
• isHidden() : BALL::VIEW::ClippingPlane , BALL::VIEW::Representation
• isHomomorph() : BALL::Composite
• isHumanReadable() : BALL::VIEW::POVRenderer , BALL::VIEW::XML3DRenderer
• isIdentity() : BALL::TMatrix4x4< T >
• isImportant() : BALL::VIEW::LogEvent
• isInBrackets() : BALL::SmilesParser::SPAtom
• isInDirectMode() : BALL::VIEW::PyWidget
• isInFourierSpace() : BALL::TFFT1D< ComplexTraits > , BALL::TFFT2D< ComplexTraits > , BALL::TFFT3D< ComplexTraits >
• isInitialized() : BALL::MMFF94ParametersBase , BALL::PyInterpreter
• isInOneAromaticRing() : BALL::MMFF94
• isInRange() : BALL::PiecewiseFunction , BALL::RadialDistributionFunction
• isInRing() : BALL::RingAnalyser
• isInRingSystem() : BALL::RingAnalyser
• isInside() : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType > , BALL::TRegularData3D< ValueType >
• isInteger() : BALL::Options
• isInterBond() : BALL::Bond
• isInterBondOf() : BALL::Bond
• isInterior() : BALL::Composite
• isInternal() : BALL::SmartsParser::SPEdge , BALL::SmartsParser::SPNode
• isIntersecting() : BALL::TSimpleBox3< T >
• isIntraBond() : BALL::Bond
• isIntraBondOf() : BALL::Bond
• isKiosk() : BALL::VIEW::UIOperationMode
• isLastChild() : BALL::Composite
• isLastChildOf() : BALL::Composite
• isLess() : BALL::Comparator< T >
• isLessOrEqual() : BALL::Comparator< T >
• isLigandIntraMolecular() : BALL::ScoringComponent
• isLinked() : BALL::ConnectedToPredicate::CTPNode
• isLowerTriangular() : BALL::TMatrix4x4< T >
• isMapped() : BALL::NMRStarFile::BALLToBMRBMapper
• isMaster() : BALL::MPISupport
• isMetal() : BALL::Element
• isMixed() : BALL::EmpiricalHSShiftProcessor::PropertiesForShift_
• isMolecule() : BALL::Composite , BALL::Molecule
• isMonomericPolymer() : BALL::NMRStarFile
• isMutated() : BALL::GeneticIndividual
• isNatural() : BALL::CubicSpline1D
• isNeighbouredTo() : BALL::SESFace
• isNewerThan() : BALL::TimeStamp
• isNextSiblingOf() : BALL::Composite
• isNonRingAtom() : BALL::GAFFCESParser::APSMatcher
• isNormalizationEnabled() : BALL::VIEW::GridColorWidget
• isNot() : BALL::SmartsParser::SPBond , BALL::SmartsParser::SPEdge
• isNotEqual() : BALL::Comparator< T >
• isNRingAtom() : BALL::GAFFCESParser::APSMatcher
• isNSp3() : BALL::PLP
• isNTerminal() : BALL::Residue
• isOK_() : BALL::VIEW::ChainColorProcessor , BALL::VIEW::MoleculeColorProcessor , BALL::VIEW::PositionColorProcessor
• isOlderThan() : BALL::TimeStamp
• isOpen() : BALL::File
• isOrthogonal() : BALL::TRegularData3D< ValueType >
• isOrthogonalTo() : BALL::TVector2< T > , BALL::TVector3< T > , BALL::TVector4< T >
• ISOTOPE : BALL::SmartsParser::SPAtom
• isotope_ : BALL::SmilesParser::SPAtom
• isotope_number : BALL::NMRStarFile::ShiftReferenceElement
• isotopic_labeling : BALL::NMRStarFile::Sample::Component
• isParentOf() : BALL::Composite , BALL::ResourceEntry
• isPaused() : BALL::VIEW::RenderSetup
• isPeptideBond() : BALL::ScoringFunction
• isPreviousSiblingOf() : BALL::Composite
• isProtein() : BALL::Composite , BALL::Protein
• isRBegin() : BALL::Atom::BondIteratorTraits , BALL::Composite::ChildCompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits , BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
• isReadable() : BALL::File
• isReadyToSwap() : BALL::VIEW::RenderSetup
• isReal() : BALL::Options
• isRecording() : BALL::VIEW::Scene
• isRecursive() : BALL::SmartsParser , BALL::SmartsParser::SPNode
• isRedock() : BALL::VIEW::DockDialog , BALL::VIEW::GeometricFitDialog
• isRegister() : BALL::VIEW::RegisterHelpSystemMessage
• isRegistered() : BALL::ShiftModel
• isRegular() : BALL::TMatrix4x4< T >
• isRelatedWith() : BALL::Composite , BALL::ResourceEntry
• isRelativeToCamera() : BALL::VIEW::LightSource
• isREnd() : BALL::Atom::BondIteratorTraits , BALL::Composite::ChildCompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits , BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits >
• isResidue() : BALL::Composite , BALL::Residue
• isResponseCentered() : BALL::QSAR::QSARData
• isRingAtom() : BALL::GAFFCESParser::APSMatcher
• isRingAtom_() : BALL::AddHydrogenProcessor
• isRoot() : BALL::Composite , BALL::ResourceEntry
• isRootOf() : BALL::Composite
• isRunning() : BALL::PluginHandler , BALL::TCPServerThread , BALL::Timer
• isSectionEnd() : BALL::INIFile::IteratorTraits_
• isSectionFirstLine() : BALL::INIFile::IteratorTraits_
• isSectionLastLine() : BALL::INIFile::IteratorTraits_
• isSelected() : BALL::Selectable , BALL::VIEW::GeometricObjectSelectionMessage
• isSelectionEnabled() : BALL::ForceField , BALL::ResidueChecker
• isSet() : BALL::Options
• isSiblingOf() : BALL::Composite
• isSimplicial() : BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >
• isSingular() : BALL::Atom::BondIteratorTraits , BALL::BaseIterator< Container, DataType, Position, Traits > , BALL::Composite::AncestorIteratorTraits , BALL::Composite::ChildCompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::CompositeIteratorTraits , BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ , BALL::HashGrid3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::DataIteratorTraits , BALL::HashSet< Key >::IteratorTraits , BALL::ResourceEntry::IteratorTraits_ , BALL::RSEdge , BALL::RSFace , BALL::TMatrix4x4< T >
• isSolutionNeeded() : BALL::FPTBondOrderStrategy::DPBackTracking_
• isSortedBy() : BALL::DockResult
• isSp3() : BALL::PLP
• isSpace() : BALL::String
• isStickModel() : BALL::VIEW::AddBallAndStickModel
• isSubAtomContainerOf() : BALL::AtomContainer , BALL::Molecule
• isSuperAtomContainerOf() : BALL::AtomContainer
• isSupported_() : BALL::VIEW::PreferencesEntry
• isSurfaceModel() : BALL::VIEW::ModelInformation
• isSwappingBytes() : BALL::DCDFile , BALL::DSN6File
• isSymmetric() : BALL::TMatrix4x4< T >
• isTerminal() : BALL::Nucleotide , BALL::Residue
• istr_ : BALL::PersistenceManager
• isTrained() : BALL::QSAR::BayesModel , BALL::QSAR::NBModel , BALL::QSAR::SNBModel
• isTransformationEnabled() : BALL::File
• isTransparencyEnabled() : BALL::VIEW::GridColorWidget
• isUnknown() : BALL::Element
• isUpdateRunning() : BALL::VIEW::Scene
• isUpperTriangular() : BALL::TMatrix4x4< T >
• isValid() : BALL::Atom::BondIteratorTraits , BALL::Atom , BALL::AtomContainer , BALL::BaseIterator< Container, DataType, Position, Traits > , BALL::BitVector , BALL::Bond , BALL::Client , BALL::Composite::AncestorIteratorTraits , BALL::Composite::ChildCompositeIteratorTraits , BALL::Composite::CompositeIteratorTraits , BALL::Composite , BALL::CompositeIteratorTraits , BALL::Directory
• isvalid() : BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_
• isValid() : BALL::EnergyMinimizer , BALL::EnergyProcessor , BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ , BALL::File , BALL::ForceField , BALL::ForceFieldParameters , BALL::FPTBondOrderStrategy::Assignment_ , BALL::FragmentDB , BALL::Gradient , BALL::HashGrid3< Item >::BoxIteratorTraits , BALL::HashGrid3< Item > , BALL::HashGridBox3< Item >::BoxIteratorTraits , BALL::HashGridBox3< Item >::DataIteratorTraits , BALL::HashGridBox3< Item > , BALL::HashSet< Key > , BALL::HashSet< Key >::IteratorTraits , BALL::INIFile , BALL::INIFile::IteratorTraits_ , BALL::MolecularDynamics , BALL::NucleicAcid , BALL::Nucleotide , BALL::Object , BALL::Parameters , BALL::ParameterSection , BALL::PiecewiseFunction , BALL::PropertyManager , BALL::Protein , BALL::PyInterpreter , BALL::RadialDistributionFunction , BALL::RandomNumberGenerator , BALL::RDFIntegrator , BALL::RegularExpression , BALL::Residue , BALL::ResidueRotamerSet , BALL::ResourceEntry , BALL::ResourceEntry::IteratorTraits_ , BALL::ResourceFile , BALL::RuleEvaluator , BALL::RuleProcessor , BALL::SecondaryStructure , BALL::ShiftModel1D , BALL::ShiftModel2D , BALL::ShiftModel , BALL::ShiftModule , BALL::SnapShot , BALL::SnapShotManager , BALL::SolventDescriptor , BALL::String , BALL::Substring , BALL::TAngle< T > , BALL::TBox3< T > , BALL::TCircle3< T > , BALL::Timer , BALL::TLine3< T > , BALL::TMatrix4x4< T > , BALL::TPlane3< T > , BALL::TSimpleBox3< T > , BALL::TSphere3< T > , BALL::TVector2< T > , BALL::TVector3< T > , BALL::TVector4< T > , BALL::VIEW::Box , BALL::VIEW::ConnectionObject , BALL::VIEW::DatasetMessage , BALL::VIEW::Disc , BALL::VIEW::FrameBufferFormat , BALL::VIEW::GeometricObject , BALL::VIEW::GLDisplayList , BALL::VIEW::Label , BALL::VIEW::Line , BALL::VIEW::Mesh , BALL::VIEW::ModelProcessor , BALL::VIEW::MultiLine , BALL::VIEW::Point , BALL::VIEW::PyWidget , BALL::VIEW::Representation , BALL::VIEW::Scene , BALL::VIEW::ServerWidget , BALL::VIEW::ShortcutTableModel , BALL::VIEW::SimpleBox , BALL::VIEW::Sphere , BALL::VIEW::Tube , BALL::VIEW::TwoColoredLine , BALL::VIEW::TwoColoredTube , BALL::VIEW::Vertex2 , BALL::VIEW::Vertex
• isValid_() : BALL::AromaticityProcessor , BALL::ConnectivityBase , BALL::Descriptor , BALL::PartialChargeBase , BALL::SimpleBase , BALL::SurfaceBase
• isVector() : BALL::Options
• isVicinal() : BALL::Atom
• isWhatsThisEnabled() : BALL::VIEW::HelpViewer
• isWhitespace() : BALL::String
• isWritable() : BALL::File
• isXNatural() : BALL::CubicSpline2D
• isYNatural() : BALL::CubicSpline2D
• isZero() : BALL::TVector2< T > , BALL::TVector3< T >
• it_ : BALL::TContour< T > , BALL::TContourLine< T >
• Item() : BALL::CIFFile::Item
• item_backup_ : BALL::VIEW::AtomOverview
• item_names : BALL::CIFFile::Datablock
• item_to_dataset_ : BALL::VIEW::DatasetController
• item_to_entry_ : BALL::VIEW::Preferences
• item_to_plane_ : BALL::VIEW::GeometricControl
• item_to_representation_ : BALL::VIEW::GeometricControl
• item_to_widget_ : BALL::VIEW::Preferences
• itemActivated() : BALL::VIEW::AtomOverview
• itemChanged() : BALL::VIEW::AtomOverview
• ItemList : BALL::VIEW::GenericControl
• items : BALL::CIFFile::SaveFrame
• iteration_ : BALL::GeneticAlgorithm
• ITERATIONS : BALL::IMGDock::Default , BALL::IMGDock::Option
• Iterator : BALL::AtomVector , BALL::ConnectedToPredicate::CTPNode , BALL::EdgeItem< Node, Edge > , BALL::Enumerator< Container, SiteIterator, Variant > , BALL::ExpressionParser::SyntaxTree
• iterator : BALL::FPTBondOrderStrategy::DPTable_
• Iterator : BALL::Gradient , BALL::HashMap< Key, T >
• iterator : BALL::HashSet< Key >
• Iterator : BALL::HashSet< Key >
• iterator : BALL::List< Value >
• Iterator : BALL::List< Value > , BALL::NodeItem< Node, Edge > , BALL::PDBRecords
• iterator : BALL::PDBRecords
• Iterator : BALL::PeakList< PT > , BALL::PyColorRGBAVector , BALL::PyCompositeList , BALL::PyDatasetVector , BALL::PyIndexList , BALL::ResidueRotamerSet
• iterator : BALL::ResidueRotamerSet
• Iterator : BALL::ResourceEntry , BALL::ResourceFile , BALL::Spectrum< DataT, PeakT, PositionT >
• iterator : BALL::String
• Iterator : BALL::StringHashMap< Value > , BALL::TRegularData1D< ValueType >
• iterator : BALL::TRegularData1D< ValueType > , BALL::TRegularData2D< ValueType >
• Iterator : BALL::TRegularData2D< ValueType >
• iterator : BALL::TRegularData3D< ValueType >
• Iterator : BALL::TRegularData3D< ValueType >
• iterator : BALL::VIEW::CompositeManager
• iterator_category : BALL::BaseIterator< Container, DataType, Position, Traits > , BALL::ConstBidirectionalIterator< Container, DataType, Position, Traits > , BALL::ConstForwardIterator< Container, DataType, Position, Traits > , BALL::ConstRandomAccessIterator< Container, DataType, Position, Traits >
• IteratorPosition : BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ , BALL::HashSet< Key > , BALL::ResourceEntry
• IteratorTraits : BALL::HashSet< Key > , BALL::HashSet< Key >::IteratorTraits
• IteratorTraits_ : BALL::Enumerator< Container, SiteIterator, Variant > , BALL::Enumerator< Container, SiteIterator, Variant >::IteratorTraits_ , BALL::INIFile::IteratorTraits_ , BALL::INIFile::Section , BALL::ResourceEntry , BALL::ResourceEntry::IteratorTraits_