Here is a list of all class members with links to the classes they belong to:
- d -
- d
: RANSACParam
- d_
: CubicSpline2d
- d_intensity_
: NucleicAcidSpectrumGenerator
- DALTONS
: XTandemInfile
- DALYDETECTOR
: IonDetector
- DarkGrey
: ColorBrewer::Distinct
- dashed_
: Annotation1DVerticalLineItem
- data
: BinaryDataArray
, MzMLHandler::ChromatogramData
, MzMLHandler::SpectrumData
, OSBinaryDataArray
, XCorrArrayType
- data_
: CalibrationData
, DataValue
, ExposedVector< VectorElement >
, FASTAContainer< TFI_Vector >
, KDTreeFeatureNode
, BilinearInterpolation< Key, Value >
, LinearInterpolation< Key, Value >
, Mobilogram
, ParamValue
, QTCluster
, SimpleSVM
, TransformationDescription
, TransformationXMLFile
- data_bg_
: FASTAContainer< TFI_File >
- data_fg_
: FASTAContainer< TFI_File >
- data_given_
: TransformationModelLinear
- data_id
: Observation
- DATA_PROCESSING
: DataProcessing
- data_processing_
: ChromatogramSettings
, ConsensusMap
, FeatureMap
, MzDataHandler
, MzXMLHandler
, MetaInfoDescription
, SpectrumSettings
- data_range_
: Area< N_DIM >
- data_to_decode_
: MzDataHandler
- data_to_encode_
: MzDataHandler
- data_type
: MzMLHandlerHelper::BinaryData
- database
: DBSearchParam
, MzTabMDatabaseMetaData
, MzTabMMetaData
, MzTabNucleicAcidSectionRow
, MzTabPeptideSectionRow
, MzTabProteinSectionRow
, MzTabPSMSectionRow
, MzTabSmallMoleculeSectionRow
- database_
: SequestInfile
- DATABASE_EMPTY
: PeptideIndexing
- database_identifier
: MzTabMSmallMoleculeEvidenceSectionRow
, MzTabMSmallMoleculeSectionRow
- database_location_
: AccurateMassSearchEngine
- database_name_
: AccurateMassSearchEngine
- database_ref
: MzIdentMLDOMHandler::DBSequence
- database_version
: DBSearchParam
, MzTabNucleicAcidSectionRow
, MzTabPeptideSectionRow
, MzTabProteinSectionRow
, MzTabPSMSectionRow
, MzTabSmallMoleculeSectionRow
- database_version_
: AccurateMassSearchEngine
- DataFilter()
: DataFilters::DataFilter
- DataFilterDialog()
: DataFilterDialog
- DataFilters()
: DataFilters
- DataMatrix()
: DataMatrix
- DataPoint
: TransformationDescription
, TransformationModel::DataPoint
- DataPoints
: TransformationDescription
, TransformationModel
- DataProcessing()
: DataProcessing
- DataProcessingVisualizer()
: DataProcessingVisualizer
- DataSelectionTabs()
: DataSelectionTabs
- dataToWidget()
: Plot1DCanvas
- dataToWidget_()
: Plot1DCanvas
, Plot2DCanvas
- dataToWidgetDistance()
: Plot1DCanvas
- dataToZoomArray_()
: Plot3DOpenGLCanvas
- DataType
: DataValue
, LayerDataDefs
- DataValue()
: DataValue
- Datavector
: CachedMzMLHandler
- Date()
: Date
- date
: MzIdentMLDOMHandler::DatabaseInput
- date_
: MascotXMLHandler
, PepXMLFile
, ProteinIdentification
- date_time
: ProcessingStep
- date_time_string_
: MascotXMLHandler
- DateTime()
: DateTime
- datetime_
: ExperimentalSettings
, ExperimentalSettingsVisualizer
- DatumSingleton
: CachedMzMLHandler
- db
: ProteinIdentification::SearchParameters
- db_
: InspectInfile
, OMSFileLoad
, OMSFileStore
, MascotInfile
, MzTab::CMMzTabStream
, MzTab::IDMzTabStream
, ProteinIdentificationVisualizer
, SqliteConnector
- db_map_
: MzIdentMLDOMHandler
- db_mapping_file_
: AccurateMassSearchEngine
- db_mass_
: AccurateMassSearchResult
- db_pos_length_
: InspectOutfile
- db_search_params_
: IdentificationData
- db_search_steps_
: IdentificationData
- db_sq_map_
: MzIdentMLDOMHandler
- db_struct_file_
: AccurateMassSearchEngine
- db_version
: ProteinIdentification::SearchParameters
- db_version_
: MzTab::CMMzTabStream
, MzTab::IDMzTabStream
, ProteinIdentificationVisualizer
- DBoundingBox()
: DBoundingBox< D >
- DBSearchParam
: IdentificationData
, DBSearchParam
- DBSearchParams
: IdentificationData
- DBSearchSteps
: IdentificationData
- DBSuitability()
: DBSuitability
- DBSuitability_friend
: DBSuitability
, DBSuitability_friend
- deactivate1DSpectrum()
: TVIdentificationViewController
, TVSpectraViewController
- deactivateBehavior()
: TVControllerBase
, TVIdentificationViewController
- deactivatePrecalculationMode()
: MultiGradient
- debug()
: BSpline2d
- debug_
: FeatureFinderAlgorithmPicked
- debug_im_file_
: SwathMapMassCorrection
- debug_level_
: FeatureFinderAlgorithmMetaboIdent
, FeatureFinderIdentificationAlgorithm
, TOPPBase
- debug_lvl_
: BayesianProteinInferenceAlgorithm
- debug_mz_file_
: SwathMapMassCorrection
- debug_streams_
: LogConfigHandler
- debugOut_()
: TOPPASVertex
- decode()
: Base64
- decodeBase64Arrays()
: MzMLHandlerHelper
- decodeBinaryDataChrom_()
: MzMLSpectrumDecoder
- decodeBinaryDataMSChrom_()
: MzMLSpectrumDecoder
- decodeBinaryDataMSSpectrum_()
: MzMLSpectrumDecoder
- decodeBinaryDataSpectrum_()
: MzMLSpectrumDecoder
- decodeCompressed_()
: Base64
- decoded_char
: MzMLHandlerHelper::BinaryData
- decoded_double_list_
: MzDataHandler
- decoded_list_
: MzDataHandler
- decodeIntegers()
: Base64
- decodeIntegersCompressed_()
: Base64
- decodeIntegersUncompressed_()
: Base64
- decodeNP()
: MSNumpressCoder
- decodeNPInternal_()
: MSNumpressCoder
- decodeNPRaw()
: MSNumpressCoder
- decoder_
: Base64
- decodeSingleString()
: Base64
- decodeStrings()
: Base64
- decodeUncompressed_()
: Base64
- decomp_
: MassDecomposition
- decomposer_
: RealMassDecomposer
, MassDecompositionAlgorithm
- decomposition_type
: IntegerMassDecomposer< ValueType, DecompositionValueType >
, MassDecomposer< ValueType, DecompositionValueType >
- decomposition_value_type
: IntegerMassDecomposer< ValueType, DecompositionValueType >
, MassDecomposer< ValueType, DecompositionValueType >
- decompositions_type
: IntegerMassDecomposer< ValueType, DecompositionValueType >
, MassDecomposer< ValueType, DecompositionValueType >
, RealMassDecomposer
- decon_ms1_mz_tol_
: SwathQC
- deconvolved_spectrum_
: FLASHDeconvAlgorithm
- DeconvolvedSpectrum()
: DeconvolvedSpectrum
- DECOY
: ReactionMonitoringTransition
- decoy
: SiriusFragmentAnnotation::SiriusTargetDecoySpectra
, TransitionTSVFile::TSVTransition
, LightTransition
- decoy_
: OSWPeptidePrecursor
- decoy_case_sensitive
: DecoyHelper::DecoyStatistics
- decoy_compound_ref
: MetaboTargetedTargetDecoy::MetaboTargetDecoyMassMapping
- decoy_count
: DecoyHelper::DecoyStatistics
- decoy_counts
: TargetedExperiment::SummaryStatistics
- decoy_file_number
: MetaboTargetedAssay::TargetDecoyGroup
- decoy_index
: MetaboTargetedAssay::TargetDecoyGroup
- decoy_index_
: ConfidenceScoring
- decoy_mz
: MetaboTargetedAssay::TargetDecoyGroup
- decoy_pattern_
: DBSuitability
- decoy_prefix_
: OpenPepXLAlgorithm
, OpenPepXLLFAlgorithm
, PepXMLFile
- decoy_product_masses
: MetaboTargetedTargetDecoy::MetaboTargetDecoyMassMapping
- decoy_rt
: MetaboTargetedAssay::TargetDecoyGroup
- decoy_string_
: XQuestResultXMLHandler
, OpenPepXLAlgorithm
, OpenPepXLLFAlgorithm
, PeptideIndexing
, XFDRAlgorithm
- decoy_type_
: ReactionMonitoringTransition
- DecoyGenerator()
: DecoyGenerator
- decoys_
: SimpleSearchEngineAlgorithm
- DecoyStringToAffixCount
: DecoyHelper
- DecoyTransitionType
: ReactionMonitoringTransition
- DEF_COSINE_SIMILARITY
: GNPSMGFFile
- DEF_MERGE_BIN_SIZE
: GNPSMGFFile
- DEF_MSMAP_CACHE
: GNPSMGFFile
- DEF_PEPT_CUTOFF
: GNPSMGFFile
- default_array_length
: MzMLHandler::ChromatogramData
, MzMLHandler::SpectrumData
- default_array_length_
: MzMLHandler
- default_baseloss_
: Ribonucleotide
- DEFAULT_BIN_OFFSET_HIRES
: BinnedSpectrum
- DEFAULT_BIN_OFFSET_LOWRES
: BinnedSpectrum
- DEFAULT_BIN_WIDTH_HIRES
: BinnedSpectrum
- DEFAULT_BIN_WIDTH_LOWRES
: BinnedSpectrum
- default_dir_
: ToolsDialog
, TOPPASToolConfigDialog
- default_ms_level_
: DTAFile
- default_nterm_mods_
: XTandemXMLFile
- default_parameters_file_
: XTandemInfile
- default_processing_
: MzMLHandler
- default_scan_regexp
: SpectrumLookup
- default_value
: ParameterInformation
- defaultArrayLength
: Chromatogram
, Spectrum
, OSChromatogram
, OSSpectrum
- DefaultParamHandler()
: DefaultParamHandler
- defaults_
: DefaultParamHandler
- defaultsToParam_()
: DefaultParamHandler
- defineDefaults()
: DiaPrescore
- deisotope_mode_
: OpenPepXLAlgorithm
, OpenPepXLLFAlgorithm
- deisotopeAndSingleCharge()
: Deisotoper
- deisotopeAndSingleChargeMSSpectrum_()
: NucleicAcidSearchEngine
- deisotopeMS2Spectra_()
: TargetedSpectraExtractor
- deisotopeWithAveragineModel()
: Deisotoper
- DEISOTOPING
: DataProcessing
- deisotoping_annotate_charge_
: TargetedSpectraExtractor
- deisotoping_fragment_tolerance_
: TargetedSpectraExtractor
- deisotoping_fragment_unit_
: TargetedSpectraExtractor
- deisotoping_keep_only_deisotoped_
: TargetedSpectraExtractor
- deisotoping_max_charge_
: TargetedSpectraExtractor
- deisotoping_max_isopeaks_
: TargetedSpectraExtractor
- deisotoping_min_charge_
: TargetedSpectraExtractor
- deisotoping_min_isopeaks_
: TargetedSpectraExtractor
- deisotoping_use_deisotoper_
: TargetedSpectraExtractor
- delay_
: AcqusHandler
- delay_in_seconds_
: FileWatcher
- DELAYED_EXTRACTION
: Instrument
- delete_buffer_
: LogStream
- deleteAllItems_()
: Annotations1DContainer
- deleteData_()
: GradientVisualizer
- deleteRow()
: LPWrapper
- deleteSetNull_()
: MzMLSwathFileConsumer
- delim_
: MSstatsFile
, TriqlerFile
- delta()
: SysInfo::MemUsage
- delta_cn_weights_
: SequestOutfile
- delta_D()
: SpectraSTSimilarityScore
- delta_mass
: MultiplexDeltaMasses::DeltaMass
, MultiplexDeltaMassesGenerator::Label
- delta_mass_weights_
: SequestOutfile
- delta_masses_
: MultiplexDeltaMasses
- delta_masses_list_
: MultiplexDeltaMassesGenerator
- DeltaMass()
: MultiplexDeltaMasses::DeltaMass
- denominator_ref_
: ConsensusFeature::Ratio
- DepletedIDPool()
: DepletedIDPool
- depth
: ACNode::DepthHits
- depth_and_hits
: ACNode
- DepthHits()
: ACNode::DepthHits
- derivative()
: BSpline2d
, CubicSpline2d
, LinearInterpolation< Key, Value >
- derivatives()
: CubicSpline2d
- derivatization_agent
: MzTabMMetaData
- DerivatizationAgent
: IsotopeLabelingMDVs
- derivatized_form
: MzTabMSmallMoleculeEvidenceSectionRow
- des
: SiriusMSFile::CompoundInfo
- desc_
: TOPPASBase
- description
: ControlledVocabulary::CVTerm
, FASTAFile::FASTAEntry
, ParentSequence
, IsobaricQuantitationMethod::IsobaricChannelInformation
, ItraqConstants::ChannelInfo
, MultiplexDeltaMassesGenerator::Label
, MzTabMetaData
, MzTabMMetaData
, MzTabMStudyVariableMetaData
, MzTabNucleicAcidSectionRow
, MzTabProteinSectionRow
, MzTabSampleMetaData
, MzTabSmallMoleculeSectionRow
, MzTabStudyVariableMetaData
, Param::ParamEntry
, Param::ParamIterator::TraceInfo
, Param::ParamNode
, ParameterInformation
, OSBinaryDataArray
- description_
: ConsensusFeature::Ratio
, FASTAFile
, PepXMLFile::AminoAcidModification
, ToolInfo
- description_text_
: TOPPASScene
- descriptions_
: ParamXMLHandler
- descriptionUpdated_()
: TOPPASBase
- deselectAll()
: Annotations1DContainer
- deselectItemAt()
: Annotations1DContainer
- detectElutionPeaks_()
: ElutionPeakDetection
- detecting_transition
: TransitionTSVFile::TSVTransition
, LightTransition
- detectingTransitions()
: MRMAssay
- detector
: MzTabInstrumentMetaData
- detectOriginAnnotationFormat_()
: IDRipper
- detectPeaks()
: ElutionPeakDetection
- determineHighestScoringPermutations_()
: AScore
- determineIMFormat()
: IMTypes
- determinePeptideIntensitiesCentroided_()
: FeatureFinderMultiplexAlgorithm
- determinePeptideIntensitiesProfile_()
: FeatureFinderMultiplexAlgorithm
- df()
: EGHTraceFitter::EGHTraceFunctor
, EmgFitter1D::EgmFitterFunctor
, GaussTraceFitter::GaussTraceFunctor
, LevMarqFitter1D::GenericFunctor
, TraceFitter::GenericFunctor
- DFS_BLACK
: TOPPASVertex
- dfs_ccsplit_visitor()
: IDBoostGraph::dfs_ccsplit_visitor
- DFS_COLOR
: TOPPASVertex
- dfs_color_
: TOPPASVertex
- DFS_GRAY
: TOPPASVertex
- DFS_WHITE
: TOPPASVertex
- dfsVisit_()
: TOPPASScene
- DI
: IonSource
- dia_by_ion_score()
: DIAScoring
- dia_byseries_intensity_min_
: DIAScoring
- dia_byseries_ppm_diff_
: DIAScoring
- dia_centroided_
: DIAScoring
- dia_extract_window_
: DiaPrescore
, DIAScoring
- dia_extraction_ppm_
: DIAScoring
- dia_isotope_scores()
: DIAScoring
- dia_massdiff_score()
: DIAScoring
- dia_ms1_isotope_scores()
: DIAScoring
- dia_ms1_isotope_scores_averagine()
: DIAScoring
- dia_ms1_massdiff_score()
: DIAScoring
- dia_nr_charges_
: DIAScoring
- dia_nr_isotopes_
: DIAScoring
- dia_treewidget_
: DIATreeTab
- dia_widget_
: DataSelectionTabs
- diagonal()
: DIntervalBase< D >
- diaIsotopeScoresSub_()
: DIAScoring
- DIAOSW_IDX
: DataSelectionTabs
- DiaPrescore()
: DiaPrescore
- DIAScoring()
: DIAScoring
- diascoring_
: MRMFeatureFinderScoring
- diatab_controller_
: DataSelectionTabs
- DIATreeTab()
: DIATreeTab
- diff_average_mass_
: ResidueModification
- diff_formula_
: UnimodXMLHandler
, ResidueModification
- diff_mono_mass_
: ResidueModification
- diff_score
: IDDecoyProbability::Transformation_
- diff_str_()
: SysInfo::MemUsage
- difference_type
: _Iterator< _Val, _Ref, _Ptr >
, KDTree< __K, _Val, _Acc, _Dist, _Cmp, _Alloc >
, AASequence::ConstIterator
, AASequence::Iterator
, ConstRefVector< ContainerT >::ConstRefVectorConstIterator< ValueT >
, ConstRefVector< ContainerT >
, ExposedVector< VectorElement >
, HashGrid< Cluster >::ConstIterator
, HashGrid< Cluster >::Iterator
, AreaIterator< ValueT, ReferenceT, PointerT, SpectrumIteratorT, PeakIteratorT >
, IntensityIteratorWrapper< IteratorT >
, MatchedIterator< CONT_T, TRAIT, CONST_T >
, NASequence::ConstIterator
, NASequence::Iterator
- diffEstimatedEmpirical()
: FalseDiscoveryRate
- digest()
: ProteaseDigestion
, RNaseDigestion
- digestAfterTokenize_()
: EnzymaticDigestion
- digestDatabase()
: OPXLHelper
- digested_db_
: Contaminants
- digested_relevant_peptides_
: NeighborSeq
- Digestion()
: Digestion
- digestion_
: IDFilter::DigestionFilter
, IDFilter::PeptideDigestionFilter
- digestion_enzyme
: DBSearchParam
, ProteinIdentification::SearchParameters
- digestion_time_
: Digestion
- DigestionEnzyme()
: DigestionEnzyme
- digestionenzyme_
: DigestionVisualizer
- DigestionEnzymeDB()
: DigestionEnzymeDB< DigestionEnzymeType, InstanceType >
- DigestionEnzymeDB< DigestionEnzymeProtein, ProteaseDB >
: ProteaseDB
- DigestionEnzymeDB< DigestionEnzymeRNA, RNaseDB >
: RNaseDB
- DigestionEnzymeProtein()
: DigestionEnzymeProtein
- DigestionFilter()
: IDFilter::DigestionFilter
- digestionPH_
: DigestionVisualizer
- digestiontemperature_
: DigestionVisualizer
- digestiontime_
: DigestionVisualizer
- DigestionVisualizer()
: DigestionVisualizer
- digestUnmodified()
: EnzymaticDigestion
- dilution_factor
: AbsoluteQuantitationStandards::featureConcentration
, AbsoluteQuantitationStandards::runConcentration
- DIM
: RangeIntensity
, RangeMobility
, RangeMZ
, RangeRT
- dim_
: FeatureXMLHandler
- DimBase()
: DimBase
- DIMENSION
: ChromatogramPeak
, DBoundingBox< D >
, DPosition< D, TCoordinateType >
, DRange< D >
, DIntervalBase< D >
, MobilityPeak1D
, MobilityPeak2D
, Peak1D
, Peak2D
- dimension_name_full_
: MobilityPeak2D
, Peak2D
- dimension_name_short_
: MobilityPeak2D
, Peak2D
- dimension_unit_full_
: MobilityPeak2D
, Peak2D
- dimension_unit_short_
: MobilityPeak2D
, Peak2D
- DimensionDescription
: MobilityPeak2D
, Peak2D
- dimensionsChanged_()
: PlotCanvas
- dimensionsize()
: DistanceMatrix< Value >
- dimensionsize_
: DistanceMatrix< Value >
- DimIM()
: DimIM
- DimINT()
: DimINT
- DimMapper()
: DimMapper< N_DIM >
- DimMZ()
: DimMZ
- DimRT()
: DimRT
- dims_
: DimMapper< N_DIM >
- DIntervalBase
: DIntervalBase< D >
- DIon
: NASequence
- DIRECT
: IonSource
- directoryChanged()
: OutputDirectory
- dirName_
: ParamEditorDelegate
- dirNameValid()
: OutputDirectory
- disable
: Colorizer::ColorWithUndo_
- disable_()
: ToolsDialog
- disable_parsing_
: FeatureXMLHandler
- disableCutoff()
: TOPPViewOpenDialog
- disableDimension()
: TOPPViewOpenDialog
- disabledValue()
: IDFilter::PeptideDigestionFilter
- disableLocation()
: TOPPViewOpenDialog
- disconnect()
: _Alloc_base< _Tp, _Alloc >::NoLeakAlloc
- discover_vertex()
: IDBoostGraph::dfs_ccsplit_visitor
- disease
: MzTabSampleMetaData
- Disjoint
: DRange< D >
- DISSI
: IonSource
- dist_
: HistogramWidget
, UniqueIdGenerator
- distance
: BinaryTreeNode
, QTCluster::Neighbor
- distance_()
: FeatureDistance
, MinimumDistance
- distance_it_for_cluster_idx_
: GridBasedClustering< Metric >
- distance_type
: KDTree< __K, _Val, _Acc, _Dist, _Cmp, _Alloc >
, squared_difference< _Tp, _Dist >
, squared_difference_counted< _Tp, _Dist >
- DistanceMatrix()
: DistanceMatrix< Value >
- DistanceParams_()
: FeatureDistance::DistanceParams_
- distances_
: GridBasedClustering< Metric >
- distIsOutlier_()
: QTClusterFinder
- distribute_()
: LogStreamBuf
- distribution_
: IsotopeDistribution
- divideByGCD()
: Weights
- DivisionByZero()
: DivisionByZero
- dlg_
: GUIProgressLoggerImpl
- DM_CONNECTEDLINES
: Plot1DCanvas
- dm_elements_2d_
: TOPPViewBase
- dm_hull_2d_
: TOPPViewBase
- dm_hulls_2d_
: TOPPViewBase
- dm_ident_2d_
: TOPPViewBase
- dm_label_2d_
: TOPPViewBase
- DM_PEAKS
: Plot1DCanvas
- dm_precursors_2d_
: TOPPViewBase
- dm_unassigned_2d_
: TOPPViewBase
- do_p_trim
: IsoSpecTotalProbWrapper
- doCacheFile_()
: SwathFile
- doCleanup_()
: MSDataWritingConsumer
, NoopMSDataWritingConsumer
- document_id_
: IdXMLFile
- DocumentIdentifier()
: DocumentIdentifier
- DocumentIdentifierVisualizer()
: DocumentIdentifierVisualizer
- docurl_
: ToolInfo
- doDataNormalization_()
: OpenSwathCalibrationWorkflow
- doesParamChangeInvalidate_()
: TOPPASToolVertex
- doi
: Citation
- domParseChromatogram()
: MzMLSpectrumDecoder
- domParseIndexedEnd_()
: IndexedMzMLDecoder
- domParseSpectrum()
: MzMLSpectrumDecoder
- domParseString_()
: MzMLSpectrumDecoder
- done()
: MascotRemoteQuery
, NetworkGetRequest
- doPopulateSpectraWithData_()
: MzXMLHandler
- doRelease_()
: shared_xerces_ptr< T >
, unique_xerces_ptr< T >
- dot_bias()
: SpectraSTSimilarityScore
- dotprod_score_dia
: OpenSwath_Scores
- DOUBLE
: ParameterInformation
, String
- DOUBLE_BOUNDED
: LPWrapper
- DOUBLE_LIST
: DataValue
, ParamValue
- DOUBLE_VALUE
: DataValue
, ParamValue
- DOUBLELIST
: ParameterInformation
- DoubleTolerancePredicate_()
: ListUtils::DoubleTolerancePredicate_
- doubleToString()
: ParamValue
- DoubleType
: CachedMzMLHandler
- DoubleVector
: LowessSmoothing
- DOWN
: MassAnalyzer
- download()
: File
- downloadProgress()
: MascotRemoteQuery
- downloadTOPPASfromHomepage_()
: TOPPASBase
- doWrite_
: OpenSwathOSWWriter
, OpenSwathTSVWriter
- DPair
: RansacModel< ModelT >
- DPosition()
: DPosition< D, TCoordinateType >
- dps_
: MSDataWritingConsumer
- drag_start_pos_
: TOPPASTreeView
- dragEnterEvent()
: EnhancedTabBar
, EnhancedWorkspace
, InputFile
, InputFileList
, PlotWidget
, TOPPASWidget
- dragMoveEvent()
: EnhancedWorkspace
, InputFile
, InputFileList
, PlotWidget
, TOPPASWidget
- DRange()
: DRange< D >
- DRangeIntersection
: DRange< D >
- draw()
: Annotation1DCaret< DataPoint >
, Annotation1DDistanceItem
, Annotation1DItem
, Annotation1DPeakItem< DataPoint >
, Annotation1DTextItem
, Annotation1DVerticalLineItem
- draw_group_1d_
: TOPPViewBase
- draw_interesting_MZs_
: Plot1DCanvas
- draw_modes_
: Plot1DCanvas
- drawAlignment_()
: Plot1DCanvas
- drawAnnotations_()
: Painter1DBase
- drawAxesLegend_()
: Plot3DOpenGLCanvas
- drawBoundingBox_()
: Annotation1DItem
- drawCaret()
: PainterBase
- drawCoordinates_()
: Plot1DCanvas
, Plot2DCanvas
- drawCross()
: PainterBase
- drawDashedLine()
: PainterBase
- drawDeltas_()
: Plot1DCanvas
, Plot2DCanvas
- drawDiamond()
: PainterBase
- drawHighlightedPeak_()
: Plot1DCanvas
- drawIcon()
: PainterBase
- drawLineWithArrows()
: PainterBase
- DrawModes
: Plot1DCanvas
- drawMZAtInterestingPeaks_()
: Painter1DPeak
- drawText_()
: PlotCanvas
- drift_time
: TransitionTSVFile::TSVTransition
, LightCompound
- drift_time_
: MSSpectrum
, Precursor
, PeptideCompound
- drift_time_unit_
: Mobilogram
, MSSpectrum
, Precursor
- drift_window_low_
: Precursor
- drift_window_up_
: Precursor
- driftScoring()
: IonMobilityScoring
- driftScoringMS1()
: IonMobilityScoring
- driftScoringMS1Contrast()
: IonMobilityScoring
- DRIFTTIME_NOT_SET
: IMTypes
- dropEvent()
: EnhancedTabBar
, EnhancedWorkspace
, InputFile
, InputFileList
, PlotWidget
, TOPPASWidget
- dropOnTab()
: EnhancedTabBar
- dropOnWidget()
: EnhancedTabBar
- dropReceived()
: EnhancedWorkspace
, PlotWidget
- dry_run_
: TOPPASScene
- dryRunFinished()
: TOPPASScene
- dt_
: DateTime
- DT_CHROMATOGRAM
: LayerDataDefs
- DT_CONSENSUS
: LayerDataDefs
- DT_FEATURE
: LayerDataDefs
- DT_FLOAT
: MzMLHandlerHelper::BinaryData
- DT_IDENT
: LayerDataDefs
- DT_INT
: MzMLHandlerHelper::BinaryData
- DT_NONE
: MzMLHandlerHelper::BinaryData
- DT_PEAK
: LayerDataDefs
- DT_STRING
: MzMLHandlerHelper::BinaryData
- DT_UNKNOWN
: LayerDataDefs
- DTA
: FileTypes
- DTA2D
: FileTypes
- DTA2DFile()
: DTA2DFile
- DTAFile()
: DTAFile
- dunnIndices()
: ClusterAnalyzer
- DVec
: RansacModel< ModelT >
- DVecIt
: RansacModel< ModelT >
- dw_
: AcqusHandler
- DYNODE
: IonDetector
- dynprog_()
: SpectrumCheapDPCorr